ID: uc001oeh.2_intron_13_0_chr11_65314392_r.5p
GENE: (3)
chr11:65314710-65314959-


(2)
AGO2.ip 		(1)
B-CELL 		(2)
BRAIN 		(5)
BREAST 		(28)
CELL-LINE 		(8)
CERVIX 		(3)
HEART 		(1)
HELA 		(2)
LIVER 		(1)
OTHER 		(7)
SKIN 		(1)
TESTES

Sense strand
CTGCTACCCCGGCTACCGGCTCAAAGCCTCCCGGCCTCCTGTGTGCGAAGGTGAGGGGACCCCATTCAGACCAAAGAAGGAGCTCCTTAGCTGTCTCTCCACCTGGGGTGGGGCTGGGGTGCCTGCATTTTTTTTTTTTTCCCCCGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCGGTGGTGAGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTC
.........................................................................................................................................(((((((((.(((((((.....)))))))..((.....))....))).)).))))..........................................................
...........................................................................................................................124.................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040028(GSM532913)
G026N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR029127(GSM416756)
A549. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM956925PAZD5SRR040025(GSM532910)
G613T. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040032(GSM532917)
G603N. (cervix)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR189785SRR040031(GSM532916)
G013T. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR040024(GSM532909)
G613N. (cervix)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCGCG..............................................................2436.000.0035.001.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCAC...............................................................2327.000.0022.005.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCACG..............................................................2423.000.0021.002.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCGTG..............................................................2418.000.0018.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCGGG..............................................................2412.000.0010.002.00---------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCAC...............................................................2510.000.006.004.00---------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCGTG..............................................................266.000.006.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCGC...............................................................236.000.006.00----------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGCGGG..............................................................285.000.004.001.00---------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCGGG..............................................................265.000.004.001.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCACC..............................................................245.000.005.00----------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGCAC...............................................................274.000.003.001.00---------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCGC...............................................................254.000.004.00----------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCACG..............................................................264.000.004.00----------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGCGTG..............................................................284.000.004.00----------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGTGGATCG...........................................................294.000.003.001.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCGCA..............................................................244.000.004.00----------------------------------------------------------------
.....................................................................................................................................................................CGCCCAGGCTGGAGTGCGGCGCG..............................................................233.000.003.00----------------------------------------------------------------
......................................................................................................................................................................................................CTCACTGCAACCTCCGCCTCCCGGCCC.........................273.000.003.00----------------------------------------------------------------
.........................................................................................................................................................................CAGGCTGGAGTGCGGTGGTGATA..........................................................232.000.00------------2.00----------------------------------------------------
...............................................................................................................................................................CTCTGTCGCCCAGGCTGGAGTGCGGCAC...............................................................282.000.001.001.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGGGTG..............................................................242.000.002.00----------------------------------------------------------------
..............................................................................................................................................................ACTCTGTCGCCCAGGCTGGAGTGCGGCAC...............................................................292.000.001.001.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGTTGC...............................................................232.000.001.001.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCACA..............................................................242.000.002.00----------------------------------------------------------------
..............................................................................................................................................................ACTCTGTCGCCCAGGCTGGAGTGCGGCGCG..............................................................302.000.002.00----------------------------------------------------------------
.................GGCTCAAAGCCTCCCGGCCTCCT..................................................................................................................................................................................................................2312.002.00---------------2.00-------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCCC...............................................................232.000.002.00----------------------------------------------------------------
..................................................................................................................................................................................................................................AAGCGATTCTCCTGCCTCAGCCTGGCT272.000.002.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCTCG..............................................................242.000.001.001.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCGCC..............................................................242.000.002.00----------------------------------------------------------------
...............................................................................................................................................................CTCTGTCGCCCAGGCTGGAGTGCGGCGGG..............................................................292.000.002.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGGGAC..............................................................242.000.001.001.00---------------------------------------------------------------
....................................................................................................................................................................................................GGCTCACTGCAACCTCCGCCTATA..............................242.000.00------------2.00----------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCCAG..............................................................242.000.002.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGGGCG..............................................................242.000.002.00----------------------------------------------------------------
.........................................................................................................................................................................................................ACTGCAACCTCCGCCTCCCGGGTCG........................252.000.002.00----------------------------------------------------------------
...............................................................................................................................................................................................ATCTTGGCTCACTGCAACCTCCGCCGGAG..............................291.000.001.00----------------------------------------------------------------
..GCTACCCCGGCTACCGGCTC....................................................................................................................................................................................................................................2011.001.00----------------------------------------------------------1.00------
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCTCCCTGTC..........................291.000.00-1.00---------------------------------------------------------------
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCTCCCGGGACA........................311.000.001.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCCCC..............................................................241.000.001.00----------------------------------------------------------------
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCTCGGGT............................271.000.001.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCAGG..............................................................241.000.001.00----------------------------------------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCGCAGC....................................................................................................221.000.001.00----------------------------------------------------------------
.....................................................................................................................................................................CGCCCAGGCTGGAGTGCGGCAC...............................................................221.000.00-1.00---------------------------------------------------------------
...........................................................................................................................TGCATTTTTTTTTTTTTCTGGA.........................................................................................................221.000.001.00----------------------------------------------------------------
.......................................................................................................................................................................................................................CTCCCGGGTTCAAGCGATTCTCCTGCCTCGGC...321.000.00-------1.00---------------------------------------------------------
................................................................................................................................................................................................TCTTGGCTCACTGCAACCTCCGCCGGGT..............................281.000.00-1.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGTGGATCG...........................................................271.000.001.00----------------------------------------------------------------
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCTCCCGGGGCCA.......................321.000.00-1.00---------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCTC...............................................................251.000.001.00----------------------------------------------------------------
.........................................................................................................................................................................................................ACTGCAACCTCCGCCTCCCGGCCC.........................241.000.001.00----------------------------------------------------------------
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCTCCCGGGCAG........................311.000.001.00----------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCGCC..............................................................261.000.001.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCACT..............................................................241.000.001.00----------------------------------------------------------------
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCTCCCGCGGT.........................301.000.00-1.00---------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCGT...............................................................251.000.001.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCTTG..............................................................241.000.00-1.00---------------------------------------------------------------
..................................................................................................CCACCTGGGGTGGGGCGGTC....................................................................................................................................201.000.001.00----------------------------------------------------------------
........CCGGCTACCGGCTCAAAGCCTCC...........................................................................................................................................................................................................................2311.001.00-----------------------------------1.00-----------------------------
..........................................................................................................................CTGCATTTTTTTTTTTTTACAG..........................................................................................................221.000.00-------------------------------------------------------1.00---------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGCGCC...............................................................251.000.001.00----------------------------------------------------------------
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCTCCCGGGCGG........................311.000.001.00----------------------------------------------------------------
...................................................................................................................................................................GTCGCCCAGGCTGGAGTGCGGCGCG..............................................................251.000.00-1.00---------------------------------------------------------------
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCTCCCGGGGCC........................311.000.00-1.00---------------------------------------------------------------
.............................................................................................................................CATTTTTTTTTTTTTCCCAA.........................................................................................................201.000.00----------------1.00------------------------------------------------
...........................................................................................................................................................................................................................CGGGTTCAAGCGATTCTCCTGA.........221.000.00-------------------1.00---------------------------------------------
.............................................................................................................................CATTTTTTTTTTTTTCCCAAG........................................................................................................211.000.00----------------1.00------------------------------------------------
..........................................................................................................................................................................AGGCTGGAGTGCGGTGCGA.............................................................191.000.001.00----------------------------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCCCCTGA.....................................................................................................231.000.00-----------------1.00-----------------------------------------------
..................................................................................................................................................................................................TTGGCTCACTGCAACCTCCGCCTCCCGGGACC........................321.000.00-1.00---------------------------------------------------------------
...........................................................................................................................TGCATTTTTTTTTTTTTCCTGAC........................................................................................................231.000.00-1.00---------------------------------------------------------------
.......................................................................................................................................................................CCCAGGCTGGAGTGCGGGGCG..............................................................211.000.001.00----------------------------------------------------------------
.........................................................................................................................................................GTCTCACTCTGTCGCCCAGGCTGGCG.......................................................................261.000.00-------1.00---------------------------------------------------------
..............................................................................................................................................................ACTCTGTCGCCCAGGCTGGAGTGCGGCTC...............................................................291.000.001.00----------------------------------------------------------------
..........................................................................................................................CTGCATTTTTTTTTTTTTCTGTC.........................................................................................................231.000.00-1.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGTGCCG.............................................................251.000.00-----------------1.00-----------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGCGCG...............................................................231.000.001.00----------------------------------------------------------------
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCGGGT..............................251.000.00-1.00---------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGT.................................................................2501.001.00----1.00------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGGTG...............................................................231.000.001.00----------------------------------------------------------------
...............................................................................................................................................................................................ATCTTGGCTCACTGCAACCTCCGCCTAGGT.............................301.000.00-1.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCAAG..............................................................241.000.001.00----------------------------------------------------------------
...............................................................................................................................................................................................ATCTTGGCTCACTGCAACCTCCGCCGGCG..............................291.000.001.00----------------------------------------------------------------
...............................................................................................................................................................CTCTGTCGCCCAGGCTGGAGTGCGGCGC...............................................................281.000.001.00----------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGTC.................................................................251.000.00-1.00---------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCAA...............................................................251.000.00-1.00---------------------------------------------------------------
.......................................................................................................................................................................CCCAGGCTGGAGTGCGGTGGAGGG...........................................................241.000.00--------------------------------------------1.00--------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGTTACA.............................................................251.000.00-1.00---------------------------------------------------------------
..................................................................................................................................................................................................TTGGCTCACTGCAACCTCCGCCTCCCGGCCCC........................321.000.00-1.00---------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGCGCG..............................................................281.000.001.00----------------------------------------------------------------
..........................................................................................................................................................................................................................CCGGGTTCAAGCGATTCTCCTGGT........241.000.00--------------------1.00--------------------------------------------
...............................................................................................................................TTTTTTTTTTTTTCCCCCGGCG.....................................................................................................221.000.001.00----------------------------------------------------------------
...................................................................................................................................................................................................................................AGCGATTCTCCTGCCTCAGCCTGGTG261.000.001.00----------------------------------------------------------------
.......................................................................................................................................................................CCCAGGCTGGAGTGCGGTGCCTC............................................................231.000.00-1.00---------------------------------------------------------------
.......................AAGCCTCCCGGCCTCCTGTGTGCGAAGAC......................................................................................................................................................................................................291.000.00--------------------------------------1.00--------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGTGTGAT............................................................261.000.001.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGGTC...............................................................231.000.001.00----------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCACA..............................................................261.000.001.00----------------------------------------------------------------
...................................................................................................................................................................GTCGCCCAGGCTGGAGTGCGGTG................................................................2301.001.00-----1.00-----------------------------------------------------------
.............................................................................................................................CATTTTTTTTTTTTTCCCCCGAGGAG...................................................................................................261.000.00----------------1.00------------------------------------------------
...............................................................................................................................TTTTTTTTTTTTTCCCCCGTGC.....................................................................................................221.000.00-1.00---------------------------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCCCCATG.....................................................................................................231.000.00------------------1.00----------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGCACG..............................................................281.000.001.00----------------------------------------------------------------
.........................................................................................................................................................................................................ACTGCAACCTCCGCCTCCCGGGTCGG.......................261.000.001.00----------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGCGC...............................................................271.000.00-1.00---------------------------------------------------------------
.........................................................................................................................................................................................................ACTGCAACCTCCGCCTCCCGGGACC........................251.000.001.00----------------------------------------------------------------
.....................................................................................................................................................................CGCCCAGGCTGGAGTGCGGCGTG..............................................................231.000.001.00----------------------------------------------------------------
..............................................................................................................................................................ACTCTGTCGCCCAGGCTGGAGTGCGGCACG..............................................................301.000.001.00----------------------------------------------------------------
.....................................................................................................................................................................CGCCCAGGCTGGAGTGCGGCACG..............................................................231.000.001.00----------------------------------------------------------------
.................................................................................................................................................................................................CTTGGCTCACTGCAACCTCCGGGTC................................251.000.00-1.00---------------------------------------------------------------
..............................................................................................................................................................ACTCTGTCGCCCAGGCTGGAGTGCGGCA................................................................281.000.001.00----------------------------------------------------------------
............................................................................................................................GCATTTTTTTTTTTTTCCCTTTG.......................................................................................................231.000.001.00----------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCACC..............................................................261.000.001.00----------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGCGT...............................................................271.000.001.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCGAG..............................................................241.000.00-1.00---------------------------------------------------------------
...................................................................................................................................TTTTTTTTTCCCCCGAGACGGAGTTTTC...........................................................................................281.000.00-1.00---------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGCAGG..............................................................261.000.001.00----------------------------------------------------------------
..............................................................................................................................................................ACTCTGTCGCCCAGGCTGGAGTGCGGCGC...............................................................291.000.001.00----------------------------------------------------------------
.......................................................................................................................................TTTTTCCCCCGAGACGCC.................................................................................................181.000.00------------------------------------------------1.00----------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGTGGACCG...........................................................291.000.00-1.00---------------------------------------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCGCCC.....................................................................................................211.000.00-1.00---------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGCCG................................................................221.000.001.00----------------------------------------------------------------
....................TCAAAGCCTCCCGGCCTCCTGTGTGCGAAGAC......................................................................................................................................................................................................321.000.00--------------------1.00--------------------------------------------
..................................................................................................................................................................................................................................AAGCGATTCTCCTGCCTCAGCCTGCTT271.000.00---------------1.00-------------------------------------------------
...........................................................................................................................TGCATTTTTTTTTTTTTCCCCTGGG......................................................................................................251.000.00-1.00---------------------------------------------------------------
..........................................................................................................................................................................AGGCTGGAGTGCGGTGGTTCGA..........................................................221.000.00-1.00---------------------------------------------------------------
.........................................................................................................................................................................................................ACTGCAACCTCCGCCTCCCGGGTCGA.......................261.000.00-1.00---------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGGTG...............................................................271.000.001.00----------------------------------------------------------------
..............................................................................................................................................................ACTCTGTCGCCCAGGCTGGAGTGCGGTGTG..............................................................301.000.001.00----------------------------------------------------------------
.................................................................................................................................................................CTGTCGCCCAGGCTGGAGTGCGCGGC...............................................................261.000.001.00----------------------------------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGCAAC..............................................................241.000.00-1.00---------------------------------------------------------------
............................................................................................................................................................TCACTCTGTCGCCCAGGCTGGTCCC.....................................................................251.000.001.00----------------------------------------------------------------
...............................................................................................................................................................CTCTGTCGCCCAGGCTGGAGTGCGGCACG..............................................................291.000.001.00----------------------------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGGGA...............................................................251.000.00------------------------------------------------------------1.00----
...................................................................................................................................................................................................TGGCTCACTGCAACCTCCGCCTCCCTCTC..........................291.000.001.00----------------------------------------------------------------
.........................................................................................................................................................................................................ACTGCAACCTCCGCCTCCCGGC...........................221.000.00------------------------1.00----------------------------------------
.................................................................................................................................................................CTGTCGCCCAGGCTGGAGTGCGGTGGATCG...........................................................301.000.001.00----------------------------------------------------------------
..........................................................................................................................................................................................................CTGCAACCTCCGCCTCCCGGGGTGA.......................251.000.00----------------------------------------1.00------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGTGGTGAG...........................................................2750.200.200.20----------------------------------------------------------------
..........................................................................AGAAGGAGCTCCTTA.................................................................................................................................................................1560.170.17-----------------0.17-----------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCCCG........................................................................................................2060.170.170.17----------------------------------------------------------------
.................................................................................................TCCACCTGGGGTGGGG.........................................................................................................................................1670.140.14----------------------------------------------------------------0.14
...............................................................................................................................TTTTTTTTTTTTTCCCCCGAGACGG..................................................................................................2590.110.110.11----------------------------------------------------------------

Antisense strand
CTGCTACCCCGGCTACCGGCTCAAAGCCTCCCGGCCTCCTGTGTGCGAAGGTGAGGGGACCCCATTCAGACCAAAGAAGGAGCTCCTTAGCTGTCTCTCCACCTGGGGTGGGGCTGGGGTGCCTGCATTTTTTTTTTTTTCCCCCGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCGGTGGTGAGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTC
.........................................................................................................................................(((((((((.(((((((.....)))))))..((.....))....))).)).))))..........................................................
...........................................................................................................................124.................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040028(GSM532913)
G026N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR029127(GSM416756)
A549. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM956925PAZD5SRR040025(GSM532910)
G613T. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040032(GSM532917)
G603N. (cervix)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR189785SRR040031(GSM532916)
G013T. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR040024(GSM532909)
G613N. (cervix)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
...............................................................................................................................GGGGGAAAAAAAAAAAAA......................................................................................................... 18029.0029.00--9.00-8.005.00-4.00--2.00--1.00---------------------------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCGCA...................................................................................................... 208.000.00---2.00-1.00--1.00-------------1.00-------1.00------------1.00---1.00-----------------
................................................................................................................................TTTTTTTTTTTTCCCCCGCAA..................................................................................................... 217.000.00---3.00----1.00----------------1.00--1.00---------------------------1.00--------
.........................................................................................................................................................................................................................CCCGGGTTCAAGCGATTCTCCTGTAAT...... 276.000.00------6.00----------------------------------------------------------
................................................................................................................................CGGGGGAAAAAAAAAAAA........................................................................................................ 1805.005.00----1.00--1.00-----1.00-------2.00-------------------------------------------
.................................................................................................................................TTTTTTTTTTTCCCCCGCAA..................................................................................................... 204.000.00---2.00------------------------------1.00-----------------1.00------------
...............................................................................................................................TTTTTTTTTTTTTCCCCCGCAA..................................................................................................... 224.000.00---1.00----1.001.00----------------------1.00--------------------------------
..........................................................................................................................................................................................................................CCGGGTTCAAGCGATTCTCCTGTAAT...... 264.000.00------4.00----------------------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCCCAAAA..................................................................................................... 233.000.00---------2.00-----------------------1.00-------------------------------
..................................................................................................................................CGGGGGAAAAAAAAAA........................................................................................................ 1603.003.00--1.00-1.00--------1.00---------------------------------------------------
...........................................................................................................................................................................GGCTGGAGTGCGGTGGTGGGC.......................................................... 213.000.002.00------------------------------------1.00---------------------------
...............................................................................................................................CGGGGGAAAAAAAAAAAAA........................................................................................................ 1903.003.00-------1.00--1.00--------1.00---------------------------------------------
.................................................................................................................................................................CTGTCGCCCAGGCTGGAGTGCGGTGGTC............................................................. 283.000.003.00----------------------------------------------------------------
...................................................................................................................................CGGGGGAAAAAAAAA........................................................................................................ 1503.003.00-----3.00-----------------------------------------------------------
.....................................................................................................................................................................CGCCCAGGCTGGAGTGCGGTGGTGAG........................................................... 262.000.002.00----------------------------------------------------------------
...............................................................................................................................TTTTTTTTTTTTTCCCCCGCA...................................................................................................... 212.000.00---1.00------------------------------------------1.00------------------
...............................................................................................................................TTTTTTTTTTTTTCCCCCGCAAA.................................................................................................... 232.000.00----------------------------1.00----------------------------1.00-------
............................................................................................................................................................................GCTGGAGTGCGGTGGTACC........................................................... 192.000.00-----------------------2.00-----------------------------------------
.............................................................................................................................CATTTTTTTTTTTTTCCCCT......................................................................................................... 202.000.00--------------------------2.00--------------------------------------
........................................................................................................................................................................................................CACTGCAACCTCCGCCTCCCGGGTTT........................ 262.000.00---------------------------2.00-------------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCGTA...................................................................................................... 202.000.00---1.00-------------------------------------------------------1.00-----
.................................................................................................................................CGGGGGAAAAAAAAAAA........................................................................................................ 1702.002.00----1.001.00-----------------------------------------------------------
..........................................................................................................................................................................................................................CCGGGTTCAAGCGATTCTCCTGTC........ 242.000.00--------------2.00--------------------------------------------------
.................................................................................................................................................................................................CTTGGCTCACTGCAACCTCCGCCG................................. 242.000.002.00----------------------------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCCAAAA...................................................................................................... 222.000.00-----------2.00-----------------------------------------------------
................................................................................................................................................................................................................CCTCCGCCTCCCGGGTTCAAGCA................... 231.000.00--1.00--------------------------------------------------------------
.....................................................................................................................................................CGGAGTCTCACTCTGTGCCC................................................................................. 201.000.00-1.00---------------------------------------------------------------
.........................................................................................................................................................................CAGGCTGGAGTGCGGTGGTGAGAAGC....................................................... 261.000.00-1.00---------------------------------------------------------------
............................................................................................................................................................TCACTCTGTCGCCCAGGCTGGAGTGCGGTAGGC............................................................. 331.000.001.00----------------------------------------------------------------
.................................................................................................................................................................................AGTGCGGTGGTGAGATTTAG..................................................... 201.000.00------------------------------------------1.00----------------------
.......................................................................................................................................................................CCCAGGCTGGAGTGCGGTGGTGCT........................................................... 241.000.00-1.00---------------------------------------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCCA....................................................................................................... 191.000.00--1.00--------------------------------------------------------------
.....................................................................................................................................................................CGCCCAGGCTGGAGTGCGGTGGTGCTC.......................................................... 271.000.001.00----------------------------------------------------------------
.....................................................................................................................................................................CGCCCAGGCTGGAGTGCGGTGGTGCG........................................................... 261.000.001.00----------------------------------------------------------------
...............................................................................................................................TTTTTTTTTTTTTCCCCCGCAAC.................................................................................................... 231.000.00--------1.00--------------------------------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCC........................................................................................................ 181.000.00--1.00--------------------------------------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCCG....................................................................................................... 191.000.00-----------1.00-----------------------------------------------------
...............................................................................................................................TTTTTTTTTTTTTCCCCCGGC...................................................................................................... 211.000.00---------------------------------------1.00-------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCGCACA.................................................................................................... 221.000.00-------------------------------1.00---------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCGGAAG.................................................................................................... 221.000.00---------1.00-------------------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCCCTGAA..................................................................................................... 231.000.00-----------------------------1.00-----------------------------------
..................................................................................................................................TTTTTTTTTTCCCCCGACAA.................................................................................................... 201.000.00----------------------1.00------------------------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGTT................................................................. 231.000.00--------------1.00--------------------------------------------------
.........................................................................................................................................................................................................................CCCGGGTTCAAGCGATTCTCCTTAA........ 251.000.00-----------------------------------------------------1.00-----------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGTGGTAGG........................................................... 271.000.001.00----------------------------------------------------------------
..........................................................................................................................................................................................................................CCGGGTTCAAGCGATTCTCCTT.......... 221.000.00--1.00--------------------------------------------------------------
........................................................................................................................................................................CCAGGCTGGAGTGCGGTGGTGAGATCTACG.................................................... 301.000.00-1.00---------------------------------------------------------------
................................................................................................................................................................TCTGTCGCCCAGGCTGGAGTGCGGTGGTTT............................................................ 301.000.001.00----------------------------------------------------------------
..................................................................................................................................TTTTTTTTTTCCCCCGATA..................................................................................................... 191.000.00------------------------------------1.00----------------------------
..................................................................................................................................................................TGTCGCCCAGGCTGGAGTGCGGTGGTAGGG.......................................................... 301.000.001.00----------------------------------------------------------------
...............................................................................................................................................................CTCTGTCGCCCAGGCTGGAGTGCGGTGGAC............................................................. 301.000.00-1.00---------------------------------------------------------------
......................................................................................................................................................................GCCCAGGCTGGAGTGCGGTGGTGAACC......................................................... 271.000.00---------------------------------------------------1.00-------------
..........................................................................................................................................................................................................CTGCAACCTCCGCCTCCCGGGTTCAGAGG................... 291.000.00-1.00---------------------------------------------------------------
...............................................................................................................................................................................................................ACCTCCGCCTCCCGGGTTCAAGA.................... 231.000.00-------1.00---------------------------------------------------------
.........................................................................................................................................................................................................ACTGCAACCTCCGCCTCCCGGGCA......................... 241.000.00----------1.00------------------------------------------------------
........................................................................................................................................................................................................CACTGCAACCTCCGCCTCCCGGGTTCATAG.................... 301.000.00------------------------------------------------------1.00----------
...........................................................................................................................................................................................................................CGGGTTCAAGCGATTCTCCTGTTT....... 241.000.00-----------------------------------------1.00-----------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGTGGTGGCA.......................................................... 281.000.00-1.00---------------------------------------------------------------
...................................................................................................................................................................................................................CCGCCTCCCGGGTTCAAGCGACGAT.............. 251.000.00--1.00--------------------------------------------------------------
................................................................................................................................................................................................................CCTCCGCCTCCCGGGTTATGC..................... 211.000.00------------------------1.00----------------------------------------
....................................................................................................................................................................TCGCCCAGGCTGGAGTGCGGTGGTGAGC.......................................................... 281.000.001.00----------------------------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCTTT........................................................................................................ 201.000.00---------------------------------------------1.00-------------------
................................................................................................................................................................................................................CCTCCGCCTCCCGGGTTCAATCC................... 231.000.00-1.00---------------------------------------------------------------
.......................................................................................................................................................................................................TCACTGCAACCTCCGCCTCCCGGGTCC........................ 271.000.00----------1.00------------------------------------------------------
........................................................................................................................................................................................................CACTGCAACCTCCGCCTCCCGGGTTCAATAG................... 311.000.00-------------------------------------------------1.00---------------
..........................................................................................................................................................................AGGCTGGAGTGCGGTGGTTTGC.......................................................... 221.000.00-1.00---------------------------------------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCGCAAA.................................................................................................... 221.000.00---1.00-------------------------------------------------------------
.................................................................................................................................TTTTTTTTTTTCCCCCGCAAA.................................................................................................... 211.000.00--------1.00--------------------------------------------------------
.................................................................................................................................TTTTTTTTTTTCCCCCGCAT..................................................................................................... 201.000.00-------------------------1.00---------------------------------------
................................................................................................................................TTTTTTTTTTTTCCCCCGCC...................................................................................................... 201.000.00---------1.00-------------------------------------------------------
.................................................................................................................................................................................AGTGCGGTGGTGAGATTAG...................................................... 191.000.00------------------1.00----------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCCCCGT...................................................................................................... 221.000.00-----------1.00-----------------------------------------------------
...................................................................................................................................................................................................................CCGCCTCCCGGGTTCATG..................... 181.000.00--1.00--------------------------------------------------------------
.................................................................................................................................TTTTTTTTTTTCCCCCGCCAA.................................................................................................... 211.000.00---1.00-------------------------------------------------------------
...........................................................................................................................................................................................................................CGGGTTCAAGCGATTCTCCTGCCTCATTT.. 291.000.00--------------------------------------------------1.00--------------
..........................................................................................................................................................................................................CTGCAACCTCCGCCTCCCGGGTACGG...................... 261.000.001.00----------------------------------------------------------------
.....................................................................................................................................................CGGAGTCTCACTCTGTCGCCCAGGCTGGTC....................................................................... 301.000.001.00----------------------------------------------------------------
............................................................................................................................................................................................................GCAACCTCCGCCTCCCGGGTTCAGG..................... 251.000.00-1.00---------------------------------------------------------------
..............................................................................................................................CGGGGGAAAAAAAAAAAAAT........................................................................................................ 2060.670.67---0.33---------------------------------------------------------0.170.17--
......................................................................................................................................................................AGATCTCACCACCGCACTCCAGCCTGGGC....................................................... 2960.330.330.170.17---------------------------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCCCGAAAA.................................................................................................... 2460.330.00--------0.17--------------------0.17-----------------------------------
.....................................................................................................................................................................ATCTCACCACCGCACTCCAGCCTGGGCG......................................................... 2850.200.200.20----------------------------------------------------------------
..............................................................................................................................ATTTTTTTTTTTTTCCCCCGA....................................................................................................... 2160.170.00---------------------------------------------------------------0.17-