ID: uc001odj.2_intron_16_0_chr11_65063462_f.5p
GENE: (17)
chr11:65063412-65063661+


(1)
B-CELL 		(1)
BRAIN 		(5)
BREAST 		(9)
CELL-LINE 		(1)
CERVIX 		(8)
HEART 		(3)
HELA 		(1)
OTHER 		(1)
OTHER.ip 		(13)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TCACCCCAGATGTCCTCATCATCCCGTCAGAGCTGAGGTACTTCGTGAAGGTAGGTTTGAACTCTGCTTTTTCCCAGAAACACCAGAACCCAGTCTTTGACTTTCCCTTCTAGACCACCCGGCACTCACCCCTCATGGGTCAGCTGATGGGGATGGGGCCTCTAGCACCCTGCCCTGTGGCCTTGTTTCTTTGGGGAGGTGGTGGGACCAGAAAACAAACAACTCTGTCAGTAAAATGCTTGAGTAAACA
..............................................(((((..(((((....((((........)))).......))))).((((...))))...)))))..........(((.((((.(((.(((.((....)).)))))).)))))))..........................................................................................
............................................45...................................................................................................................162......................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
..................................................GTAGGTTTGAACTCTG........................................................................................................................................................................................16256.0056.0022.507.006.506.00-3.50-2.001.00-1.00--2.000.50----------0.50--------0.500.500.500.500.500.500.50--
.................................................GGTAGGTTTGAACTCTG........................................................................................................................................................................................17115.0015.007.005.001.001.00----1.00----------------------------------
...............TCATCATCCCGTCAGAGCTGAGGT...................................................................................................................................................................................................................2414.004.00----4.00--------------------------------------
....................ATCCCGTCAGAGCTGAGGTACT................................................................................................................................................................................................................2212.002.00---------------------------1.00--1.00------------
...................CATCCCGTCAGAGCTGAGGTACT................................................................................................................................................................................................................2312.002.00----------1.00----1.00---------------------------
..................TCATCCCGTCAGAGCTGAGGTAC.................................................................................................................................................................................................................2312.002.00-----------2.00-------------------------------
....................ATCCCGTCAGAGCTGAGGTAC.................................................................................................................................................................................................................2111.001.00--------------------------1.00----------------
............................................................................................................................................CAGCTGATGGGGATGATG............................................................................................181.000.00------1.00------------------------------------
.............CCTCATCATCCCGTCA.............................................................................................................................................................................................................................1611.001.00--------------------------------1.00----------
..........................TCAGAGCTGAGGTACTTCGTGAAG........................................................................................................................................................................................................2411.001.00------------1.00------------------------------
.............................................................................................................................................................................................TTTGGGGAGGTGGTGGGAC..........................................1911.001.00--------------1.00----------------------------
.................ATCATCCCGTCAGAGCTGAGGTACT................................................................................................................................................................................................................2511.001.00------------1.00------------------------------
.................................TGAGGTACTTCGTGAAG........................................................................................................................................................................................................1711.001.00-----------------1.00-------------------------
..................................GAGGTACTTCGTGAAGGTAGGTTTG...............................................................................................................................................................................................2511.001.00----------------------1.00--------------------
..........................................................................................................................................................................TGCCCTGTGGCCTTGTGGT.............................................................191.000.00---------1.00---------------------------------
..........................................................................................................................................................................TGCCCTGTGGCCTTGTGGA.............................................................191.000.00------------------1.00------------------------
..................TCATCCCGTCAGAGCTGAGGTACT................................................................................................................................................................................................................2411.001.00--------------------1.00----------------------
......................CCCGTCAGAGCTGAGGTA..................................................................................................................................................................................................................1811.001.00-----------------------1.00-------------------
...................CATCCCGTCAGAGCTGAGGTAC.................................................................................................................................................................................................................2211.001.00-------1.00-----------------------------------
..................................................................................................................CCACCCGGCACTCACCC.......................................................................................................................1711.001.00-----------------------------1.00-------------
..........................................................................................................................................................................TGCCCTGTGGCCTTGTGGTT............................................................201.000.00---------1.00---------------------------------
..................................................GTAGGTTTGAACTCTGCTTTTTCCC...............................................................................................................................................................................2511.001.00---------------------1.00---------------------
...............................................................................................................................................CTGATGGGGATGGGGCC..........................................................................................1730.330.33------------------------------------------0.33

Antisense strand
TCACCCCAGATGTCCTCATCATCCCGTCAGAGCTGAGGTACTTCGTGAAGGTAGGTTTGAACTCTGCTTTTTCCCAGAAACACCAGAACCCAGTCTTTGACTTTCCCTTCTAGACCACCCGGCACTCACCCCTCATGGGTCAGCTGATGGGGATGGGGCCTCTAGCACCCTGCCCTGTGGCCTTGTTTCTTTGGGGAGGTGGTGGGACCAGAAAACAAACAACTCTGTCAGTAAAATGCTTGAGTAAACA
..............................................(((((..(((((....((((........)))).......))))).((((...))))...)))))..........(((.((((.(((.(((.((....)).)))))).)))))))..........................................................................................
............................................45...................................................................................................................162......................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
.........................................................................................................................................................TGGGGCCTCTAGCACCGTT.............................................................................. 191.000.00------------------------1.00------------------
.............................................................................................................CTAGACCACCCGGCACGTT.......................................................................................................................... 191.000.00-------------------------------1.00-----------
.......................CCGTCAGAGCTGAGGCATG................................................................................................................................................................................................................ 191.000.00----------------1.00--------------------------
.............................................................................................................CTAGACCACCCGGCATGGT.......................................................................................................................... 191.000.00------1.00------------------------------------
.............................................................................................................CTAGACCACCCGGCATTGG.......................................................................................................................... 191.000.00----------------------------1.00--------------
.....................................................................................................................................................................................................................AACAAACAACTCTGTCACCGT................ 211.000.00------1.00------------------------------------
.............................................................................................................CTAGACCACCCGGCAGGGT.......................................................................................................................... 191.000.00-------------------1.00-----------------------
......................CCCGTCAGAGCTGAGGCG.................................................................................................................................................................................................................. 181.000.00---------------------------------1.00---------
...........................................................................TGGGTTCTGGTGTTTCT.............................................................................................................................................................. 1720.500.50-------------------------0.50-----------------
...............................................................................................TAGAAGGGAAAGTCAAA.......................................................................................................................................... 1730.330.33-----------------------------------------0.33-