ID: uc001obg.5
GENE: MAP4K2(3)
chr11:64559509-64559693-


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(10)
B-CELL 		(6)
BRAIN 		(36)
BREAST 		(45)
CELL-LINE 		(5)
CERVIX 		(2)
FIBROBLAST 		(8)
HEART 		(7)
HELA 		(1)
KIDNEY 		(7)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(30)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGGTGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAGAACTTCTCCAGCCCTCTGCCCAGCCCAGCTGGGATGCTGGAGCCGCTGGT
......................................................(((((((..((((...((.((((...(((((((....)))))))............)))).)).))))..)))))))......................................................
..................................................51..................................................................................135................................................
SizePerfect hitTotal NormPerfect NormSRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR029126(GSM416755)
143B. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191520(GSM715630)
89genomic small RNA (size selected RNA from t. (breast)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR191508(GSM715618)
152genomic small RNA (size selected RNA from . (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029127(GSM416756)
A549. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)
..................................................................................................................AGCATCCCTGCTGCCCCCTAGT.................................................221120.0052.006.00-4.006.008.00-1.00-2.001.005.002.00-4.001.00-2.001.001.001.001.003.003.001.003.002.001.00--2.00--1.001.00---1.00--3.002.00-2.00-1.00-2.00-1.00-1.00-1.00-1.00-1.002.002.00-----2.002.00--2.00--2.002.00--1.00-1.00------1.00-1.001.00--1.00-1.001.001.00---1.001.00-------1.001.001.00---1.00---1.00-1.00---1.00----------1.001.001.00-1.00------1.00---1.00--1.00-1.00-----1.00-
..................................................................................................................AGCATCCCTGCTGCCCCCTAGA.................................................22193.0093.007.00-4.002.002.00-3.0010.003.00-1.001.006.002.002.001.00-4.001.002.00-1.00-1.00-1.00-3.00----2.00-1.00-2.00-1.002.00-1.00--------2.001.002.00-2.00------1.00-1.001.00-----1.00----1.00----1.00-1.00---1.00---1.00--------------------1.00---1.00-----1.00-1.00---------1.001.00---1.00-----1.00--1.00-----------1.00--1.00
..................................................................................................................AGCATCCCTGCTGCCCCCTAG..................................................21152.0052.004.00--1.001.00-6.00--2.00----2.003.002.00--1.002.00-1.001.001.00-1.00-1.00-2.00----1.00-2.00--------1.00------1.00-1.00-1.00-----1.00---1.00---1.00-----1.00------------------1.00------1.00-1.00-------------1.00-----1.00--1.00-1.00--------------1.00-----1.001.00----------
..................................................GTGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAG..................................................85122.0022.00-9.00---12.00------------------------------------------------------------------------------------------------------------------------------1.00------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTA................................................23114.0052.00--1.002.00-----------------------------1.001.00-------1.00-1.00---1.00----------------------1.00------------1.00-------------------------------------------------------1.00-------1.00-------1.001.00-----
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAA................................................2319.009.00-------------------------1.001.00------------1.00--1.001.00------------------------2.00--------------------------------1.00---------------------------------------1.00---------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAT................................................2318.0093.001.00---------------1.00-2.00---------------------------1.00-1.00--------------------------------1.00------------------------------------------------------------------------------1.00--
..................................................................................................................AGCATCCCTGCTGCCCCCTAGC.................................................2215.0052.00--1.00-------------------------------------------------------------------1.00------------------------------------1.00--------1.00------------1.00---------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTT................................................2314.0052.00---1.00---------------1.00------------------------------------------------------------------------------1.00---------------------------1.00------------------------------------
...................................................TGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAG..................................................8414.004.00-4.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGAAGTT....................................................................................................................................................2114.004.00-----------------------------1.00-3.00-----------------------------------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGAAGTTT...................................................................................................................................................2214.004.00----------1.00-------------------------------1.00-----------------1.00-------------------------------------------------------------------------------------------------1.00----
..................................................................................................................AGCATCCCTGCTGCCCCCTA...................................................2014.004.001.00-------1.00------------------------------------1.00-----------------------------------------------------------------------1.00---------------------------------------------
..................................................GTGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAGT.................................................8613.0022.00-3.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAA...............................................2413.0052.00--2.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GCATCCCTGCTGCCCCCTAGT.................................................213.000.00--------------------------------------------------------2.00--------------------------------------------------------------------------------------------1.00-------------
................GTATGAGCCGCTGCAGAAGT.....................................................................................................................................................2012.002.00--------------------------------------------2.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTTT...............................................2412.0052.00--------------------------------------------------------------------------------------------------------------------------1.00----1.00-----------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCC.....................................................1812.002.00-----------------------------------2.00-------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAAA...............................................2412.009.00-----------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAT..................................................2112.004.00--------------------------1.00---------1.00------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAT...............................................2412.0052.00----------------------------1.00--------------------------------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTCGT.................................................222.000.00------------------------------------------------------------------------------------------------------1.00---1.00--------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGG.................................................2211.0052.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCAAAA..................................................211.000.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTATA.................................................2211.004.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................TGAGCATCCCTGCTGCCCCT.....................................................201.000.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................ACTTCTCCAGCCCTCTGTG..............................191.000.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
....................................................GAGGGGCGGTGGGGGCTT...................................................................................................................181.000.00-----------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
.....................................................AGGGGCGGTGGGGGGCGGA.................................................................................................................191.000.00-----------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
..........................................................................................................GAGACCTGAGCATCCCTGCTGCCCCCT....................................................2711.001.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTATT.................................................2211.004.00-----------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGACA...............................................2411.0093.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAG...............................................2411.0052.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGAAGTTA...................................................................................................................................................2211.004.00-------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTG................................................2311.0052.00--------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAAT..............................................2511.0052.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GCATCCCTGCTGCCCCCTAGTA................................................221.000.00-------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
...............GGTATGAGCCGCTGCAGAAGTTTCTG................................................................................................................................................2611.001.00------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGA........................................................................................................................................................1711.001.00-------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTATT..............................................2511.0052.00---------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTCTA.................................................221.000.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CTGGGATGCTGGAGCCG.....1711.001.00-------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
............................................................................................TGGGGGGAGAAATGGAGTTTG........................................................................211.000.00--------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTAGA..............................................2511.0052.00-----------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
...................................................................................................................GCATCCCTGCTGCCCCCTAGTGT...............................................231.000.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGTTA...............................................2411.0052.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
................GTATGAGCCGCTGCAGCAGT.....................................................................................................................................................201.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGCAA...............................................2411.0052.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.................TATGAGCCGCTGCAGAAGTTTCT.................................................................................................................................................2311.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCTTAG..................................................211.000.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTCGAT................................................231.000.00--------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAAT...............................................2411.009.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................AGCATCCCTGCTGCCCCCTAGAAGA..............................................2511.009.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................TCAGAGCTCTGGGGGGCCAG..................................................................................201.000.00--------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
.................................AGTTTCTGCTGCTGAAG.......................................................................................................................................1750.200.20---------------------------0.20---------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TGCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGGTGAGGGGCGGTGGGGGGAGGCCCAGGGCACCCTCAGAGCTCTGGGGGGAGAAATGGAGACCTGAGCATCCCTGCTGCCCCCTAGAACTTCTCCAGCCCTCTGCCCAGCCCAGCTGGGATGCTGGAGCCGCTGGT
......................................................(((((((..((((...((.((((...(((((((....)))))))............)))).)).))))..)))))))......................................................
..................................................51..................................................................................135................................................
SizePerfect hitTotal NormPerfect NormSRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR029126(GSM416755)
143B. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191520(GSM715630)
89genomic small RNA (size selected RNA from t. (breast)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR191508(GSM715618)
152genomic small RNA (size selected RNA from . (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040039(GSM532924)
G531T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR029127(GSM416756)
A549. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)
..................................................GTGAGGGGCGGTGGGGACGT................................................................................................................... 202.000.00--------------------------------------------------------------------------1.00-------------------------------------------------------------------1.00--------------------
.....................................................AGGGGCGGTGGGGGGAGTGC................................................................................................................ 201.000.00----------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
...............................GAAGTTTCTGCTGCTGAGAGA..................................................................................................................................... 211.000.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................ATCCCTGCTGCCCCCTTCTG................................................ 201.000.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGCGGTGGGGACG.................................................................................................................... 191.000.00--------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------
.......................................................................CCCAGGGCACCCTCATG................................................................................................. 171.000.00--------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
.......GCTGCAGTGGTATGACTCG............................................................................................................................................................... 191.000.00--------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................AGCTGGGCTGGGCAGAG.................... 1770.290.29--------------------0.29----------------------------------------------------------------------------------------------------------------------------------------------