ID: uc001nxw.2_intron_1_0_chr11_63662811_f
GENE: (2)
chr11:63662761-63663101+


(1)
AGO2.ip
(3)
B-CELL
(8)
BRAIN
(13)
BREAST
(15)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(4)
HELA
(4)
LIVER
(1)
OTHER
(22)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GTAATTTTGCCAAGGTGAAGTTGGCCCGACACATCCTGACTGGGAAAGAGGTGAGCACTGGGACTGGGGACATGGCAGCACCTCCCAGCCCTGTTGACACTCCAGCAGGTGGTGATGGGACTACTACTGCAGCCAACCTCTTGTTTATCCGGCAGAAATGAGATCTGAGATATAGGGGTGCAAAAAGCTGTGGGATGAAAAGGAGTAAGAAATATAAAGGAGGAAGTAGATTGGAATCCTGGGTTTCGCTGGTCAGAGAAGTGATTTGGGGCCTTTTTGTCTCATCCTCAGGTAGCTGTGAAGATCATTGACAAGACTCAACTGAACTCCTCCAGCCTCCA
...........................................................................................................................................................................................................................(((((((((((..((...((..((..(((((.........)))))))..)).))..)))).))..)))))....................................................
......................................................................................................................................................................................................................215.........................................................................291................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR189782DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR040036(GSM532921)
G243N. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040038(GSM532923)
G531N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040037(GSM532922)
G243T. (cervix)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577742(Rovira)
total RNA. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAAGAC........................25122.0022.0022.00--------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAAGACT.......................26115.0015.0015.00--------------------------------------------------------------------------------
.................................TCCTGACTGGGAAAGAG...................................................................................................................................................................................................................................................................................................17115.0015.00-------------1.00-----2.00--1.001.00---1.00-1.00----------1.001.00-----1.00---1.00---1.00----1.00--1.00-------1.00---------
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAAGACTC......................27114.0014.0014.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAGGAAGTAGATTGGATAG.......................................................................................................1913.000.00-13.00-------------------------------------------------------------------------------
...................................CTGACTGGGAAAGAGG..................................................................................................................................................................................................................................................................................................16212.5012.5012.50--------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTAT.........................................................................................................1811.000.00-----1.002.00-1.00-2.00----------1.00---------1.00--------------------1.00-----1.001.00---------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGATAG.......................................................................................................2011.000.00-9.00-------1.00------------------------------------1.00----------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTATA........................................................................................................199.000.00---1.00-1.001.00--1.00--1.00----1.00---------------1.00----------------------------1.00----1.00-------------
...............................................................................................................................................................................................................................AAGTAGATTGGAATCCTGGGTTTCGCTGGTCAGAGAAGTGATTTGGGGCCTTTTTGTCTCATCCTCAG..................................................6818.008.00----8.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................AAAGGAGGAAGTAGATTGGAATCCTGGGTTTCGCTGGTCAGAGAAGTGATTTGGGGCCTTTTTGTCTCATC.......................................................7118.008.00--8.00------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAAGACTCAAC...................3018.008.008.00--------------------------------------------------------------------------------
........................................................................................................................................................................................................................AAGGAGGAAGTAGATTGGAATCCTGGGTTTCGCTGGTCAGAGAAGTGATTTGGGGCCTTTTTGTCTCATC.......................................................7017.007.00--7.00------------------------------------------------------------------------------
.......................................................................................................................................................................................................................AAAGGAGGAAGTAGATTGGAATCCTGGGTTTCGCTGGTCAGAGAAGTGATTTGGGGCCTTTTTGTCTCATCCTCAGGTAG..............................................8016.006.00--6.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................GTAGCTGTGAAGATCATTGACAAGACTC......................2815.005.005.00--------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAAGACA.......................2614.0022.004.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAGGAAGTAGATTGGATAGT......................................................................................................204.000.00---2.00----------1.00--------------------------------------1.00---------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGATAGT......................................................................................................213.000.00---1.00----1.00--------1.00---------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAAGACTCA.....................2813.003.003.00--------------------------------------------------------------------------------
...................................CTGACTGGGAAAGAGGTAGCT.............................................................................................................................................................................................................................................................................................2113.001.00-------1.00----------2.00--------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGAT.........................................................................................................183.000.00-1.00---1.00---1.00-----------------------------------------------------------------------
................................ATCCTGACTGGGAAAGAG...................................................................................................................................................................................................................................................................................................1813.003.00-------------2.00----------1.00--------------------------------------------------------
..................................CCTGACTGGGAAAGAG...................................................................................................................................................................................................................................................................................................1623.003.00-------------------0.50--1.000.50---------------------1.00-----------------------------------
...........................................................................................................................................................................................................................GAGGAAGTAGATTGGATAGA......................................................................................................202.000.00--------1.00---1.00--------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................TGTGAAGATCATTGACAAGACTCAAC...................2612.002.002.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTAA.........................................................................................................182.000.00-----1.00---------------1.00-----------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAATTT........................252.000.00------------------------------------------------1.00-1.00------------------------------
............................ACACATCCTGACTGGGAAAGAGGT.................................................................................................................................................................................................................................................................................................2412.002.00----------------2.00----------------------------------------------------------------
..............GTGAAGTTGGCCCGACACATCCTGAC.............................................................................................................................................................................................................................................................................................................2612.002.00-----------2.00---------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................GTGAAGATCATTGACAAGACTCAACTGAAC..............3012.002.002.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGATGGT......................................................................................................212.000.00----------1.00------1.00---------------------------------------------------------------
...........................................................................................................................................................................................................................GAGGAAGTAGATTGGATAT.......................................................................................................192.000.00-2.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGATAGC......................................................................................................212.000.00---1.00--1.00--------------------------------------------------------------------------
....................................TGACTGGGAAAGAGGTAGCT.............................................................................................................................................................................................................................................................................................202.000.00---------------2.00-----------------------------------------------------------------
................................................................................................................................................................................................................................................................AGAAGTGATTTGGGGATG...................................................................182.000.00-------2.00-------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAAGACTCAACT..................3112.002.002.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................ACAAGACTCAACTGAACTCCTCCAGCC....2711.001.00--------------------------------------------------------1.00------------------------
.................................TCCTGACTGGGAAAGAGGTA................................................................................................................................................................................................................................................................................................201.000.00-------1.00-------------------------------------------------------------------------
.............GGTGAAGTTGGCCCGACACATCC.................................................................................................................................................................................................................................................................................................................2311.001.00------------------------------1.00--------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGAAAG.......................................................................................................201.000.00-1.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAGGAAGTAGATTGGATCAT......................................................................................................201.000.00------------------------------------------------------------------1.00--------------
......................................................................................................................................................................................................................................................................................................................ACAAGACTCAACTGAACTCCTCCAGC.....2611.001.001.00--------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................AGGTAGCTGTGAAGATCATTGACAAGACTC......................3011.001.001.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAGGAAGTAGATTGGATAA.......................................................................................................191.000.00--------------------------------------1.00------------------------------------------
.................................................................................................................................................................................................................................................................................................AGGTAGCTGTGAAGAAAA..................................181.000.00--------------------------------------------1.00------------------------------------
.................................................................................................................................................................................................................................................................................................AGGTAGCTGTGAAGATCATTGACAAG..........................2611.001.001.00--------------------------------------------------------------------------------
................................ATCCTGACTGGGAAAGAGGT.................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------1.00------
......................................................................................................................................................................................................................................................................................................................ACAAGACTCAACTGAACTCCTCCAGCCT...2811.001.00----------------------------1.00----------------------------------------------------
.....................................................................................................................................................................................................AAAAGGAGTAAGAAATATAAAGGAGGAAGTAGA...............................................................................................................3311.001.00-----------1.00---------------------------------------------------------------------
................................ATCCTGACTGGGAAAGAGGTAGC..............................................................................................................................................................................................................................................................................................2311.001.00-------1.00-------------------------------------------------------------------------
.............................CACATCCTGACTGGGAAAG.....................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------------1.00-------------------------------------
...................................................................................................................................................................................................................................................................................................................TTGACAAGACTCAACTGAACTCCTCCAGC.....2911.001.001.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTGT.........................................................................................................181.000.00-----1.00---------------------------------------------------------------------------
...................................CTGACTGGGAAAGAGGT.................................................................................................................................................................................................................................................................................................1711.001.001.00--------------------------------------------------------------------------------
.................................................................................CTCCCAGCCCTGTTGACACTCC..............................................................................................................................................................................................................................................2211.001.00-----------1.00---------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGAATA........................................................................................................191.000.00--------------------------------------------------------------------1.00------------
..........................................................................................................................................................................................................................................................................TGGGGCCTTTTTGTCTGT.........................................................181.000.00-------------------------1.00-------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................GTGAAGATCATTGACAAGACTCAACTGAGCTC............321.000.001.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGAAGGTT.....................................................................................................221.000.00---------------------------------------------------------------------1.00-----------
............................................................................................................................................................................................................................AGGAAGTAGATTGGAAAGGT.....................................................................................................201.000.00---1.00-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................CAGAGAAGTGATTTGGGGCCTTTTTG..............................................................2611.001.00----------------1.00----------------------------------------------------------------
................................................................................................................................................................................................................................AGTAGATTGGAATCCGG....................................................................................................171.000.00------------------------------------------------------1.00--------------------------
........................................................................................................................................................................................................................AAGGAGGAAGTAGATGGCC..........................................................................................................191.000.00---------1.00-----------------------------------------------------------------------
..............................ACATCCTGACTGGGAAAGAGGTA................................................................................................................................................................................................................................................................................................231.000.00------------------------------------1.00--------------------------------------------
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAAGACTCAA....................2911.001.001.00--------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................GTGAAGATCATTGACAAGACTCAACTGAACTC............3211.001.001.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTTA.........................................................................................................181.000.00------------1.00--------------------------------------------------------------------
.............GGTGAAGTTGGCCCGAC.......................................................................................................................................................................................................................................................................................................................1711.001.00----------------------------------------------------------------------------1.00----
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTATG........................................................................................................191.000.00--------------1.00------------------------------------------------------------------
...............................CATCCTGACTGGGAAAGAG...................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00-------
...................................................................................................................................................................................................................................................................................................................TTGACAAGACTCAACTGAACTCCTCCA.......2711.001.001.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAGGAAGTAGATTGGAAAT.......................................................................................................191.000.00---1.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGCGTG........................................................................................................191.000.00-------------------------------------1.00-------------------------------------------
............................ACACATCCTGACTGGGAAAGAGGTAGC..............................................................................................................................................................................................................................................................................................2711.002.00-------------------------------------------------1.00-------------------------------
................................ATCCTGACTGGGAAAGAGG..................................................................................................................................................................................................................................................................................................1911.001.001.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAGGAAGTAGATTGGTT.........................................................................................................171.000.00-1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGAAAGT......................................................................................................211.000.00----------------------------------1.00----------------------------------------------
................................................................................................................................................TTATCCGGCAGAAATGAGATCTGAAAA..........................................................................................................................................................................271.000.00---------------------------------------1.00-----------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTGTA........................................................................................................191.000.00--------------1.00------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTT..........................................................................................................171.000.00----------1.00----------------------------------------------------------------------
...................................CTGACTGGGAAAGAGGTAT...............................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------1.00-------------------
.......................................................................................................................................................................................AAAGCTGTGGGATGAAAAGGAG........................................................................................................................................2211.001.00--------------------1.00------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTAAC........................................................................................................191.000.00---------------1.00-----------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................GTAGCTGTGAAGATCATTGACAAGAC........................2611.001.00--------------------------1.00------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................CAAGACTCAACTGAACTCCTC.........2111.001.00------------------------------------------1.00--------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGTGCT........................................................................................................191.000.00-----1.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GGTAGCTGTGAAGATCATTGACAAGAC........................2711.001.001.00--------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................GTAGCTGTGAAGATCATTGACAAGACT.......................2711.001.00------------------1.00--------------------------------------------------------------
...........................................................................................................................................................................................................................GAGGAAGTAGATTGGAAAAGT.....................................................................................................211.000.00---1.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGCTAG.......................................................................................................201.000.00------1.00--------------------------------------------------------------------------
.......................GCCCGACACATCCTGACTGGGAAAGAG...................................................................................................................................................................................................................................................................................................2711.001.00----------------------------------------------------------------1.00----------------
..........................................................................................................................................................................................................................................................................................................TGAAGATCATTGACAAGACT.......................2011.001.00-----------------------------------1.00---------------------------------------------
..........................................................................................................................................................................................................................GGAGGAAGTAGATTGGATTGG......................................................................................................211.000.00--------1.00------------------------------------------------------------------------
..............................................................................................................................................................................................TGGGATGAAAAGGAGTATGT...................................................................................................................................201.000.00------------1.00--------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TAGCTGTGAAGATCATTGACAAGACAA......................2711.0022.001.00--------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TCAACTGAACTCCTCCAGCCTCC.2311.001.00---------------------------------------------------------------------------1.00-----
.......................................................................................................................................................................................................................................................................................................CTGTGAAGATCATTGACAAG..........................2011.001.00----------------------------------------------------------------------1.00----------
........................................................................................................................................................................................................................................................................................................TGTGAAGATCATTGACAAGA.........................2011.001.00-----------------------------------------------------------------1.00---------------
.................................TCCTGACTGGGAAAGAGGTAG...............................................................................................................................................................................................................................................................................................211.000.00--------------------1.00------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................ACAAGACTCAACTGAAC..............1720.500.500.50--------------------------------------------------------------------------------
............................................AAAGAGGTGAGCACTGG........................................................................................................................................................................................................................................................................................1730.330.33-----------------------------------------------------------------------------0.33---
.............................................................................................................................................................................................................................................................................GGCCTTTTTGTCTCAT........................................................1630.330.33-------------------------0.33-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................AACTGAACTCCTCCA.......1550.200.20--------------------------------------------------------------------------------0.20
...............................................................................................................................................................................................................................................................................................................................AACTGAACTCCTCCACCCA...1950.200.20------------------------------------------------------------------------------0.20--

Antisense strand
GTAATTTTGCCAAGGTGAAGTTGGCCCGACACATCCTGACTGGGAAAGAGGTGAGCACTGGGACTGGGGACATGGCAGCACCTCCCAGCCCTGTTGACACTCCAGCAGGTGGTGATGGGACTACTACTGCAGCCAACCTCTTGTTTATCCGGCAGAAATGAGATCTGAGATATAGGGGTGCAAAAAGCTGTGGGATGAAAAGGAGTAAGAAATATAAAGGAGGAAGTAGATTGGAATCCTGGGTTTCGCTGGTCAGAGAAGTGATTTGGGGCCTTTTTGTCTCATCCTCAGGTAGCTGTGAAGATCATTGACAAGACTCAACTGAACTCCTCCAGCCTCCA
...........................................................................................................................................................................................................................(((((((((((..((...((..((..(((((.........)))))))..)).))..)))).))..)))))....................................................
......................................................................................................................................................................................................................215.........................................................................291................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR189782DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR040036(GSM532921)
G243N. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040038(GSM532923)
G531N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040037(GSM532922)
G243T. (cervix)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577742(Rovira)
total RNA. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
..........................................................................GCAGCACCTCCCAGCCCTGTGG..................................................................................................................................................................................................................................................... 221.000.00---------------------------------------------------------1.00-----------------------
...................................................................................................................................................................................................................................................................................................................................GAACTCCTCCAGCCTCGGC 191.000.00--------------------------------1.00------------------------------------------------
...............................................................................................................................................................................................................AGAAATATAAAGGAGCTAC................................................................................................................... 191.000.00------------------------------------------------------------------------1.00--------
....................................................................................................................................................................................................................................................................................................................CAGTTGAGTCTTGTCA................. 1630.330.33------------------------0.33--------------------------------------------------------
..................................................................................................ACCACCTGCTGGAGT.................................................................................................................................................................................................................................... 1590.220.22-------------------------------------------------------------------------------0.22-
........CAACTTCACCTTGGC.............................................................................................................................................................................................................................................................................................................................. 1590.110.11------------------------------------------------------------------------------0.11--