ID: uc001nvf.1_intron_12_0_chr11_62568674_r
GENE: NXF1(8)
chr11:62568624-62568850-


(1)
AGO2.ip 		(2)
B-CELL 		(14)
BRAIN 		(16)
BREAST 		(15)
CELL-LINE 		(5)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(4)
HELA 		(3)
LIVER 		(2)
OTHER 		(14)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
GAAGCTGTATGGCAGCTACCCTGAGGATCATTGAAGAGAACATCCCTGAGGTAAGGCCTTTGGCCCAGTATTAGGCATGAGGAAGCAGGGTGTGTTAGATAGGAAGTGGCTGGAGGGCAGATTCGTCTCTGATCCACTTGCTGGTGGTGCCTCCTCTAAACTCTTCTCTCCTCACAGCTATTGTCCTTGAACTTGAGCAACAACAGGCTGTACAGGCTGGATGACAT
..........................................................................((........)).((((.((((...(((.......)))...)))).)))).......................................................................................................
........................................................................73.....................................................128.................................................................................................
SizePerfect hitTotal NormPerfect NormGSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787TAX577743(Rovira)
total RNA. (breast)		SRR189782TAX577742(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577739(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577744(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189786SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189783SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040028(GSM532913)
G026N. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR037931(GSM510469)
293GFP. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.............................................................................TGAGGAAGCAGGGTGTGTGGTT................................................................................................................................22331.000.0037.0034.0029.0027.00-31.0015.0018.0016.0012.0011.004.004.00-12.009.007.008.005.0010.005.004.002.00-4.003.005.002.002.003.003.00-2.001.00----1.00--1.00----------1.00----1.00------------------1.001.00----------
.............................................................................TGAGGAAGCAGGGTGTATAG..................................................................................................................................2056.000.001.001.001.00-32.00-3.00---1.001.00-6.00--1.00--------1.00----1.001.00--1.00-----2.00------1.00---------------1.00--------1.00---------------
.............................................................................TGAGGAAGCAGGGTGTGTGGT.................................................................................................................................2130.000.004.00-1.002.00-2.003.003.001.001.002.00---1.001.002.00----1.001.00--1.00--1.00-1.00-----------------------------------1.00--------1.00------------
.............................................................................TGAGGAAGCAGGGTGTGTAGTT................................................................................................................................2227.000.002.002.002.001.00---1.00-1.00-9.00---1.00-2.00--2.001.00-----1.002.00-----------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTCTGG..................................................................................................................................2014.000.00-1.00-2.00-3.004.001.001.00-1.00---------------------1.00-------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTAT....................................................................................................................................1813.000.001.00-1.00---2.001.00--1.00-2.00-----1.001.00--1.00--------1.00--1.00-----------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTATGG..................................................................................................................................2012.000.002.002.001.001.00----1.00-------2.00---1.00-----2.00-------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGG..................................................................................................................................2012.000.001.00-----1.00---1.00-2.00-1.00-1.001.001.00----------2.00-1.00--------------------------------------------------------
............................CATTGAAGAGAACATCCCTGAG.................................................................................................................................................................................2219.009.00-----------------------9.00----------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTCTGA..................................................................................................................................208.000.001.00-4.001.00--1.00-1.00-------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTC.....................................................................................................................................177.000.00-2.00-----1.00-1.001.00--------1.00------1.00-------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGTTT................................................................................................................................227.000.00--------1.00---------2.00-1.00-1.00-1.001.00--------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTA.....................................................................................................................................176.000.00---2.00--2.00---1.00----1.00------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGGTA................................................................................................................................226.000.001.001.002.00---------1.00---------------1.00-----------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGATT................................................................................................................................226.000.00---2.00------1.001.00---------1.00--1.00---------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGGAT................................................................................................................................225.000.00---------2.00--1.00----1.00-------1.00--------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTAGCT................................................................................................................................225.000.00-----------1.00---------1.002.00------1.00----------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTATGA..................................................................................................................................204.000.001.00-----1.00---------1.00--1.00--------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGGCT................................................................................................................................224.000.00---------1.00-1.00------------1.00--------1.00------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGGAA................................................................................................................................224.000.00---------1.00--1.00--------------------1.00-------------1.00----------------------------------------
.................................AAGAGAACATCCCTGAG.................................................................................................................................................................................1713.003.00-----------------------------------2.00-------------------------1.00--------------------------
.............................................................................TGAGGAAGCAGGGTGTATCG..................................................................................................................................203.000.00----1.00---1.00----1.00--------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGA..................................................................................................................................203.000.00----------2.00--------------------1.00--------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTACAG..................................................................................................................................203.000.00--1.00-2.00-----------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTATGT..................................................................................................................................203.000.001.00------1.00----------1.00---------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGGTC................................................................................................................................223.000.001.00---------------------2.00-----------------------------------------------------------------
.......................AGGATCATTGAAGAGAACATCC......................................................................................................................................................................................2213.003.00------------------------------------------1.00----------1.00--------1.00-------------------------
.............................................................................TGAGGAAGCAGGGTGTGTAGT.................................................................................................................................213.000.001.00-------------------------------1.001.00------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGGA.................................................................................................................................213.000.00--1.00---------1.00----1.00----------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTCTG...................................................................................................................................192.000.001.00-----1.00---------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTATAA..................................................................................................................................202.000.00----1.00-1.00---------------------------------------------------------------------------------
..................................AGAGAACATCCCTGAGCT...............................................................................................................................................................................1832.001.33------------------------------------------------------------1.00---1.00-----------------------
.............................................................................TGAGGAAGCAGGGTGTGTAG..................................................................................................................................202.000.00--1.00--------------------------------------1.00----------------------------------------------
....CTGTATGGCAGCTACCCTGAGGATC......................................................................................................................................................................................................2512.002.00-------------------------------------------2.00--------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGGTG................................................................................................................................222.000.00--------1.001.00------------------------------------------------------------------------------
...............CTACCCTGAGGATCATTGAAG...............................................................................................................................................................................................2112.002.00-------------1.00------------------------------1.00-------------------------------------------
....................................................................................................................................................................................TTGTCCTTGAACTTGAGCAACAACAGGC...................2812.002.00------------------------------------2.00---------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTATG...................................................................................................................................192.000.00---1.00--1.00---------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGAT.................................................................................................................................212.000.00---------------------1.00-----1.00------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTAAAG..................................................................................................................................202.000.00----1.00--------1.00--------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTCTAG..................................................................................................................................202.000.00-------------1.00------------------------------------------1.00-------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGGGT................................................................................................................................222.000.001.00--------1.00------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTAGAG..................................................................................................................................202.000.00-------------2.00--------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTG.....................................................................................................................................1732.002.00-0.330.33--0.67-0.33-----------------------------0.33--------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGGGGT.................................................................................................................................2131.332.00-----------------------------0.67--0.33-------------------------------------------------0.33-----
..................................AGAGAACATCCCTGAG.................................................................................................................................................................................1631.331.33---------------------------------------------------------------------------------0.67-0.330.33---
...............................................................................AGGAAGCAGGGTGTGTAGAG................................................................................................................................201.000.00---------------------------1.00------------------------------------------------------------
.................ACCCTGAGGATCATTGAA................................................................................................................................................................................................1811.001.00---------------------------------------1.00------------------------------------------------
....................CTGAGGATCATTGAAGAGAACATC.......................................................................................................................................................................................2411.001.00------------------------------------------------1.00---------------------------------------
.............................................................................TGAGGAAGCAGGGTGTATAT..................................................................................................................................201.000.00----1.00-----------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTTGTAT...............................................................................................................................231.000.00-------------------------1.00--------------------------------------------------------------
.................................................................................................................................................................................................TGAGCAACAACAGGCTGTACA.............2111.001.00--------1.00-------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTTCT...................................................................................................................................191.000.00------------1.00---------------------------------------------------------------------------
......................GAGGATCATTGAAGAGAACATCCCT....................................................................................................................................................................................2511.001.00----------1.00-----------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGTTA................................................................................................................................221.000.00-------------------------------1.00--------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGAG.....................................................................................................................................171.000.00---1.00------------------------------------------------------------------------------------
........................................................................................................................................................................................CCTTGAACTTGAGCAACAACAGG....................2311.001.00-----------------------------------------------------------------------1.00----------------
.............................................................................TGAGGAAGCAGGGTGTGTGC..................................................................................................................................201.000.00----------------------------------1.00-----------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGCATG...................................................................................................................................191.000.00----1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................TTGTCCTTGAACTTGAGCAAAC.........................221.000.00-------------------------------------------------------1.00--------------------------------
............................CATTGAAGAGAACATCCCGAAG.................................................................................................................................................................................221.000.00-----------------------1.00----------------------------------------------------------------
............................................................TGGCCCAGTATTAGGCATGAGGAAGC.............................................................................................................................................2611.001.00------------------------------------1.00---------------------------------------------------
.................................................................................................................................................................................................TGAGCAACAACAGGCTGTA...............1911.001.00------------------------------------------1.00---------------------------------------------
.............................................................................TGAGGAAGCAGGGTGCAG....................................................................................................................................181.000.00---------------1.00------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTATTT..................................................................................................................................201.000.00------------------------1.00---------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTAGTA................................................................................................................................221.000.00---------------------1.00------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTTTTT................................................................................................................................221.000.00------------------------------1.00---------------------------------------------------------
.....................TGAGGATCATTGAAGAGAACATCCCT....................................................................................................................................................................................2611.001.00--------------------------------------------------1.00-------------------------------------
.................................................................................................................................................................................CTATTGTCCTTGAACTTGAGCAACAACA......................2811.001.00--------------------------------------------1.00-------------------------------------------
.............................................................................TGAGGAAGCAGGGTGACTG...................................................................................................................................191.000.00---------------1.00------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTAG....................................................................................................................................181.000.00------------1.00---------------------------------------------------------------------------
.....................................................................ATTAGGCATGAGGAAGCAGGGTGTGTTAGATAGGAAGTGGCTGGAGGGCAGATTCGTCTCTGATCCACTTGCTGGTGGTGCCTCCTCTAAACTCTTCTCTCCT.......................................................10311.001.00------------------------------------------------------------------------------1.00---------
.............................................................................TGAGGAAGCAGGGTGTTT....................................................................................................................................181.000.00-------------------------------------1.00--------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTTTAA..................................................................................................................................201.000.00------------------1.00---------------------------------------------------------------------
................................GAAGAGAACATCCCTGAGCT...............................................................................................................................................................................2011.001.00----------------------------------------------1.00-----------------------------------------
.............................................................................TGAGGAAGCAGGGTGAC.....................................................................................................................................171.000.001.00---------------------------------------------------------------------------------------
.........................................................................................................GTGGCTGGAGGGCAGTGAC.......................................................................................................191.000.001.00---------------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTTCGC..................................................................................................................................201.000.00------------------1.00---------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTATA...................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................CAACAGGCTGTACAGGCTGGATG....2311.001.00-------------------------------------------------------------------------1.00--------------
.............................................................................TGAGGAAGCAGGGTGCG.....................................................................................................................................171.000.00---1.00------------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGATG................................................................................................................................221.000.00--1.00-------------------------------------------------------------------------------------
......................................................................................................................................................................................GTCCTTGAACTTGAGCAACAACA......................2311.001.00---------------------------------------------1.00------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTAGC.................................................................................................................................211.000.00----------------------1.00-----------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGTTG................................................................................................................................221.000.00-----1.00----------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTCGAT..................................................................................................................................201.000.00----------------------------1.00-----------------------------------------------------------
..............................................................................GAGGAAGCAGGGTGTATA...................................................................................................................................181.000.00-------------------------------1.00--------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTCTT.................................................................................................................................211.000.00------------------------------------------------------1.00---------------------------------
.............................................................................TGAGGAAGCAGGGTGCGT....................................................................................................................................181.000.00--------------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................ACAACAGGCTGTACAGGC..........1811.001.00-----------------------------------1.00----------------------------------------------------
...............................................................................................................................................................................................CTTGAGCAACAACAGGTCTG................201.000.00----1.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................ATTGTCCTTGAACTTGAGCAAC..........................2211.001.00----------------------------------------------------------1.00-----------------------------
.............................................................................TGAGGAAGCAGGGTGTCTAA..................................................................................................................................201.000.001.00---------------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTAGTT..................................................................................................................................201.000.00------------------1.00---------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGGG.................................................................................................................................211.000.00-1.00--------------------------------------------------------------------------------------
...............................................................................AGGAAGCAGGGTGTGGTG..................................................................................................................................181.000.00------------------------1.00---------------------------------------------------------------
.........................................................................GGCATGAGGAAGCAGGGTGTG.....................................................................................................................................2111.001.00---------------------------------------------1.00------------------------------------------
..............................................................................GAGGAAGCAGGGTGTGTTTGTT...............................................................................................................................221.000.00---------------------------1.00------------------------------------------------------------
..........................................................................................................................................................................................TTGAACTTGAGCAACAACAGGCTGTA...............2611.001.00----------------------------------------------1.00-----------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTAGG.................................................................................................................................211.000.00--------------------1.00-------------------------------------------------------------------
................................GAAGAGAACATCCCTGAG.................................................................................................................................................................................1811.001.00----------------------------------------------------------------------1.00-----------------
.............................................................................TGAGGAAGCAGGGTGCATA...................................................................................................................................191.000.00-------------1.00--------------------------------------------------------------------------
..............................................................................GAGGAAGCAGGGTGTGTTGT.................................................................................................................................201.000.00---------------------------1.00------------------------------------------------------------
......................GAGGATCATTGAAGAGAACATCCCTGAGC................................................................................................................................................................................291.000.00---------------------------------------1.00------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTCGTT................................................................................................................................221.000.00-----------1.00----------------------------------------------------------------------------
..............................TTGAAGAGAACATCCCTGAG.................................................................................................................................................................................2011.001.00-------------------------------------1.00--------------------------------------------------
.......................................................................................................AAGTGGCTGGAGGGCAT...........................................................................................................171.000.00-------------------------------------------------------------------------------1.00--------
.............................................................................TGAGGAAGCAGGGTGTGTTGTTT...............................................................................................................................231.000.00-----1.00----------------------------------------------------------------------------------
...............................................................................................................................TCTGATCCACTTGCTGGTGGTGCC............................................................................2411.001.00--------------------------------------------------------------------------1.00-------------
.............................................................................TGAGGAAGCAGGGTGACTA...................................................................................................................................191.000.00-----------------------------------------------------------1.00----------------------------
.............................................................................TGAGGAAGCAGGGTGTGTATCT................................................................................................................................221.000.00---------1.00------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTATTT................................................................................................................................221.000.00---------1.00------------------------------------------------------------------------------
....................................................................................................AGGAAGTGGCTGGAGGCA.............................................................................................................181.000.00-------------------------------------------------1.00--------------------------------------
............................................................................................................GCTGGAGGGCAGATTTGG.....................................................................................................181.000.00-------------------------------------------------------------------1.00--------------------
.............................................................................TGAGGAAGCAGGGTGTGTGTT.................................................................................................................................211.000.00------------------------1.00---------------------------------------------------------------
.................................................................................................................................................................................................TGAGCAACAACAGGCTGTACAGGCTG........2611.001.00-----------------------------------------------------------------1.00----------------------
.............................................................................TGAGGAAGCAGGGTGAAGA...................................................................................................................................191.000.00-----------1.00----------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTAGTG................................................................................................................................221.000.00------1.00---------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGCGT................................................................................................................................221.000.00--------------------------------------------------------------------------------1.00-------
......................................AACATCCCTGAGGTAAGGCCTTT......................................................................................................................................................................2311.001.00------------------------------------------------1.00---------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGCTT................................................................................................................................221.000.00--------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................GAGCAACAACAGGCTGTACAGGC..........2311.001.00---------------------------------------------------------------------1.00------------------
...................................................................................................................................................................................................AGCAACAACAGGCTGTACAGGCTGGATGACA.3111.001.00---------------------------------------------------1.00------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTGTTC................................................................................................................................221.000.00------------1.00---------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTAGGT..................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGACT....................................................................................................................................181.000.00--------1.00-------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGTTGTCT...............................................................................................................................231.000.00------------1.00---------------------------------------------------------------------------
................................................................................................................................................................................................TTGAGCAACAACAGGTCTG................1990.670.22-----------0.22--------------------------0.33------------------------------------------------0.11
..............................................................................GAGGAAGCAGGGTGTGTGGTT................................................................................................................................2120.500.50---------------------------0.50------------------------------------------------------------
..............................................................................GAGGAAGCAGGGTGTGTGGGT................................................................................................................................2120.500.50-----------------0.50----------------------------------------------------------------------
..............................................................................GAGGAAGCAGGGTGTGTAG..................................................................................................................................1920.500.50---------------------------0.50------------------------------------------------------------
..............................................................................GAGGAAGCAGGGTGTGT....................................................................................................................................1720.500.50---------0.50------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGAGGG.................................................................................................................................2130.332.000.33---------------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGCGTT.................................................................................................................................2130.332.00---------0.33------------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGGGGG.................................................................................................................................2130.332.00----------------------------------0.33-----------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGCGGA.................................................................................................................................2130.332.00--------------------------------0.33-------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGCTGT.................................................................................................................................2130.332.00-----------0.33----------------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGAAGC.................................................................................................................................2130.332.00-------------------------0.33--------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGCGA..................................................................................................................................2030.332.00------------------0.33---------------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGAGTT.................................................................................................................................2130.332.00-------------------------0.33--------------------------------------------------------------
.............................................................................TGAGGAAGCAGGGTGTGCAG..................................................................................................................................2030.332.00----0.33-----------------------------------------------------------------------------------
................................................................................................................................................................................................TTGAGCAACAACAGG....................1590.220.22-------------------------------------------------------------------------------------0.110.11-

Antisense strand
GAAGCTGTATGGCAGCTACCCTGAGGATCATTGAAGAGAACATCCCTGAGGTAAGGCCTTTGGCCCAGTATTAGGCATGAGGAAGCAGGGTGTGTTAGATAGGAAGTGGCTGGAGGGCAGATTCGTCTCTGATCCACTTGCTGGTGGTGCCTCCTCTAAACTCTTCTCTCCTCACAGCTATTGTCCTTGAACTTGAGCAACAACAGGCTGTACAGGCTGGATGACAT
..........................................................................((........)).((((.((((...(((.......)))...)))).)))).......................................................................................................
........................................................................73.....................................................128.................................................................................................
SizePerfect hitTotal NormPerfect NormGSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577580(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787TAX577743(Rovira)
total RNA. (breast)		SRR189782TAX577742(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577739(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577744(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189786SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189783SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040028(GSM532913)
G026N. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR037931(GSM510469)
293GFP. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
..................................................................AGTATTAGGCATGAGCCC............................................................................................................................................... 181.000.00--------------------------------------------------------------------1.00-------------------
...................................................................................AGCAGGGTGTGTTAGATACGC........................................................................................................................... 211.000.00--------------------------------------1.00-------------------------------------------------
..................................................................AGTATTAGGCATGAGAT................................................................................................................................................ 171.000.00-------------1.00--------------------------------------------------------------------------