ID: uc001nte.3_intron_4_0_chr11_62156724_f.5p
GENE: (5)
chr11:62156674-62156923+


(2)
BRAIN
(3)
BREAST
(5)
CELL-LINE
(2)
CERVIX
(8)
HEART
(1)
KIDNEY
(5)
LIVER
(1)
OTHER
(7)
SKIN

Sense strand
CGGTATCGTTAATAAAATGGTCGGCCGCGTTGGGGACTCACCGTGTCTAGGTAGGACCAAGGGATGCCTCCTGCCCCTTCCCCTCTTCTCCCGCCCTCAGGCTTTCCTCACTCTCTATTCCCTGCCCCTCTCCGTTTCTTGCTGCGTTCCCTTTCTGCTTTTGGTGCAGCTCCAGGATGTCTGGGAGTGACAATGGGGTTGGAAGGGGTTGTTCGGGGTGCTGCCTTGAGAGGGTGTTTGTATCTGGCGC
................................................................................((.(((..(((((((....))).....((((((((.((..((((................((((((...((...........))))))))..))))..))..))))))))....))))..))).))............................................
..............................................................................79.............................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR343335SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR040026(GSM532911)
G220N. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR343336TAX577740(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................TCTTCTCCCGCCCTCGGCT....................................................................................................................................................197.000.007.00-------------------------------------
...................................................................................TCTTCTCCCGCCCTCCGCT....................................................................................................................................................197.000.007.00-------------------------------------
..............................................................................................................................................................TTTTGGTGCAGCTCCA............................................................................1625.005.00--2.00-0.50---1.00-0.50-----------------0.500.50--------
.......................................................................................................................................................................................GGAGTGACAATGGGGTTTG................................................194.000.00------2.00------------1.00-1.00----------------
..............................................................................................................................................................TTTTGGTGCAGCTCC.............................................................................1533.333.33--1.67-0.33---0.330.330.33---------------------0.33-----
..............................................................................................................................................................TTTTGGTGCAGCTCCAA...........................................................................1723.005.00----1.00---0.500.50--------------------0.500.50------
...................................................................................TCTTCTCCCGCCCTCGGCC....................................................................................................................................................193.000.002.001.00------------------------------------
.....................................................................................................................................................................................TGGGAGTGACAATGGTGTT..................................................193.000.00---3.00----------------------------------
...................................................................................TCTTCTCCCGCCCTCCCGT....................................................................................................................................................192.000.002.00-------------------------------------
...............................................................................................................................................................TTTGGTGCAGCTCCA............................................................................1591.441.44--0.22-0.22---0.110.220.22-----------------0.110.11-----0.110.11-
...........ATAAAATGGTCGGCCGCGTTGGGGACTCACC................................................................................................................................................................................................................3111.001.00--------------1.00-----------------------
...................................................................................TCTTCTCCCGCCCTCCACA....................................................................................................................................................191.000.00-1.00------------------------------------
...................................................................................TCTTCTCCCGCCCTCCGTT....................................................................................................................................................191.000.00-1.00------------------------------------
.....................CGGCCGCGTTGGGGACTCACCG...............................................................................................................................................................................................................2211.001.00-----1.00--------------------------------
...................................................................................TCTTCTCCCGCCCTCGGAT....................................................................................................................................................191.000.001.00-------------------------------------
.....................................................................................................................................................................................................GTTGGAAGGGGTTGTGTTA..................................191.000.00-------------1.00------------------------
...................................................................................TCTTCTCCCGCCCTCCGC.....................................................................................................................................................181.000.001.00-------------------------------------
................ATGGTCGGCCGCGTTGGGGACTCACCGCGTC...........................................................................................................................................................................................................311.000.00------------------1.00-------------------
...................................................................................TCTTCTCCCGCCCTCGGTC....................................................................................................................................................191.000.001.00-------------------------------------
.......................................................................................................................................................................................GGAGTGACAATGGGGTTTGA...............................................201.000.00------------1.00-------------------------
...................GTCGGCCGCGTTGGGGACTCACCG...............................................................................................................................................................................................................2411.001.00-----1.00--------------------------------
.................................................................................CCTCTTCTCCCGCCCACGC......................................................................................................................................................191.000.00-------------------------1.00------------
........................................................................................................................................................................................GAGTGACAATGGGGTTTGA...............................................191.000.00--------------------------1.00-----------
...............................................................ATGCCTCCTGCCCCTTCCCCGCGC...................................................................................................................................................................241.000.00-----------1.00--------------------------
.......................................................................................................................................................TTTCTGCTTTTGGTGCTGTG...............................................................................201.000.00-1.00------------------------------------
.................................................................................CCTCTTCTCCCGCCCAC........................................................................................................................................................171.000.00--------------------1.00-----------------
..............................................................................................................................................................TTTTGGTGCAGCTCCAAA..........................................................................1820.505.00---------0.50----------------------------
...............................................................................................................................................................TTTGGTGCAGCTCCAAATA........................................................................1990.441.44--0.11-------------------------------0.22--0.11
.............................................................................................................................................................CTTTTGGTGCAGCTC..............................................................................1540.250.25---------------------------------0.25----
...............................................................................................................................................................TTTGGTGCAGCTCCAAAT.........................................................................1890.111.44----------0.11---------------------------

Antisense strand
CGGTATCGTTAATAAAATGGTCGGCCGCGTTGGGGACTCACCGTGTCTAGGTAGGACCAAGGGATGCCTCCTGCCCCTTCCCCTCTTCTCCCGCCCTCAGGCTTTCCTCACTCTCTATTCCCTGCCCCTCTCCGTTTCTTGCTGCGTTCCCTTTCTGCTTTTGGTGCAGCTCCAGGATGTCTGGGAGTGACAATGGGGTTGGAAGGGGTTGTTCGGGGTGCTGCCTTGAGAGGGTGTTTGTATCTGGCGC
................................................................................((.(((..(((((((....))).....((((((((.((..((((................((((((...((...........))))))))..))))..))..))))))))....))))..))).))............................................
..............................................................................79.............................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR343335SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR040026(GSM532911)
G220N. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR343336TAX577740(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........TTAATAAAATGGTCGG.................................................................................................................................................................................................................................. 162.000.00-------1.00-------1.00----------------------
.....................................................................................................CTTTCCTCACTCTCTTTG................................................................................................................................... 181.000.00----------------1.00---------------------
.......................................................................................CTCCCGCCCTCAGGCTTGCAG.............................................................................................................................................. 211.000.00-----------------1.00--------------------
..............................................................................TCCCCTCTTCTCCCGCCGAGG....................................................................................................................................................... 211.000.00----------------------1.00---------------
........TTAATAAAATGGTCGGG................................................................................................................................................................................................................................. 171.000.00-------1.00------------------------------
.........................................................................CCCCTTCCCCTCTTCGACA.............................................................................................................................................................. 191.000.00------------------------1.00-------------
................................................................................CCCTCTTCTCCCGCCCAATT...................................................................................................................................................... 201.000.00-----------------------1.00--------------
..............................................................................................................................................................................................CAATGGGGTTGGAAGCG........................................... 171.000.00---------------------------1.00----------