ID: uc001mxb.1_intron_1_0_chr11_40162404_r.3p
GENE: LRRC4C(1)
chr11:40162354-40162603-


(5)
BREAST 		(9)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(3)
OTHER 		(2)
SKIN 		(1)
UTERUS

Sense strand
GCATTGTTCAAAATGGCCAGTAGTTAAGAGAGTTGCTTTGGCTTTCTGCCCAGGATAGTGTTAAAATACAGTGGCAATTCAATAAATGTCATCAGTGGTGTCTGTGGTTGGTGGTTGTGGTGGTGGCAGATCAAGAATTGTCCTGAATTATTCTAATGGATGCTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTAGATTGGCAAACGCACTGCCTACTTACAGCATAGAGACCCCCAGTGGAGAGC
.................................................................................................((((((((....(((((((....(((.(((((........)))))))))))))))...)))))))).......................................................................................
.................................................................................................98.......................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR040012(GSM532897)
G648N. (cervix)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR040010(GSM532895)
G529N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040016(GSM532901)
G645N. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189785TAX577739(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTATTG.....................................................3325.000.0010.007.00--8.00-------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTTTCG.....................................................3019.000.007.004.00-2.006.00-------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTCTCG.....................................................3117.000.008.00--1.008.00-------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTATTG......................................................3216.000.005.002.00-1.008.00-------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTATTG.....................................................3013.000.008.00--3.002.00-------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTATTG......................................................2911.000.008.00---3.00-------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTAAG..........................................................279.000.002.003.001.003.00--------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTCTCG...................................................296.000.001.001.00-3.001.00-------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTCG.......................................................296.000.001.003.00-2.00--------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTCG..........................................................275.000.00-2.001.001.00-1.00------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTCCCG...................................................295.000.00-1.004.00---------------------
.........................................................................................................................................................................TTCTTTTCTTTTCTTTTTTTTTTTTTTTTAAATG...............................................344.000.003.00--1.00--------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTAG..........................................................294.000.001.001.00-1.001.00-------------------
........................................................................................................................................................................TTTCTTTTCTTTTCTTTTTTTTTTATTG......................................................284.000.003.00---1.00-------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTATTG....................................................344.000.001.00--1.002.00-------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTCAAG.....................................................323.000.00-3.00----------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTGCT.......................................................323.000.00--3.00---------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTATTG.....................................................323.000.003.00-----------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTCGAG........................................................293.000.00-----2.001.00-----------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTATG.......................................................303.000.001.001.00-1.00--------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTTCG.....................................................313.000.00-3.00----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTATG.......................................................313.000.002.001.00----------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTATTG......................................................313.000.002.00---1.00-------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTTTCTTG...................................................343.000.00-2.00-1.00--------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTCAAG...................................................292.000.00--1.00---1.00-----------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTCTTG...................................................352.000.001.00--1.00--------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTACG......................................................292.000.00-2.00----------------------
...............................................................................................................................................................................TCTTTTCTTTTTTTTTTTTTTTTATTTG...............................................282.000.001.00-1.00---------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTTTTCG........................................................322.000.00-2.00----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTTAG..........................................................302.000.00----2.00-------------------
................................................................................................................................................................TGCTTTTTTTTCTTTTCTTCCTA...................................................................232.000.00-----2.00------------------
.........................................................................................................................................................................TTCTTTTCTTTTCTTTTTTTTTTTTTCTCG...................................................302.000.00---2.00--------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTCTCG....................................................322.000.001.001.00----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTCAAG.........................................................292.000.001.001.00----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTTTAG.........................................................312.000.00-2.00----------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTCGTT.......................................................302.000.00-----2.00------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTCCC....................................................282.000.00--2.00---------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTTCAG......................................................332.000.001.00--1.00--------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTCTTG............................................................282.000.00---2.00--------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTCACT.........................................................292.000.00-----2.00------------------
........................................................................................................................................................................TTTCTTTTCTTTTCTTTTTTTTTTAACC......................................................282.000.00-----2.00------------------
................................................................................................................................................................................CTTTTCTTTTTTTTTTTTTTTTATTTG...............................................272.000.00-1.00--1.00-------------------
............................................................................................................................................................................TTTTCTTTTCTTTTTTTTTTTTTTTTATTTG...............................................312.000.001.00---1.00-------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTATTG.......................................................302.000.001.00--1.00--------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTAGGC.........................................................302.000.00--2.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTCG..........................................................262.000.00-1.00-1.00--------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTCAAG.......................................................292.000.00-2.00----------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTAGC........................................................282.000.00--1.00--1.00------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTACAG.....................................................302.000.001.001.00----------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTCTAG........................................................282.000.00-1.001.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTCGAG........................................................282.000.00--2.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTCTGG....................................................322.000.00--2.00---------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTCCTG......................................................322.000.00------2.00-----------------
......................................................................................................TGTGGTTGGTGGTTGTATAG................................................................................................................................202.000.00-------1.00--1.00-------------
...............................................................................................................................................................................TCTTTTCTTTTTTTTTTTTTTTTACG.................................................262.000.00---1.001.00-------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTCCAG....................................................322.000.00-1.00-1.00--------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTATG........................................................302.000.001.00-----1.00-----------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTAGGG............................................................281.000.00------1.00-----------------
.........................................................................................................................................................................TTCTTTTCTTTTCTTTTTTTTTTTTTCCCG...................................................301.000.001.00-----------------------
...............................................................................................................................................................................TCTTTTCTTTTTTTTTTTTTTTTAGATC...............................................281.000.00--1.00---------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTTTCCCT...................................................321.000.00----1.00-------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTCTAG...................................................291.000.00-1.00----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTGG...............................................................251.000.00--1.00---------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTATTG..........................................................291.000.00----1.00-------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTAGGC.........................................................311.000.00--1.00---------------------
......................................................................................................TGTGGTTGGTGGTTGGGC..................................................................................................................................181.000.00------------------1.00-----
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTCTAG......................................................321.000.00---1.00--------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTAGTC......................................................291.000.00--1.00---------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTTTCGGG...................................................321.000.00--1.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTCCTG........................................................281.000.00---1.00--------------------
.........................................................................................................................................................................TTCTTTTCTTTTCTTTTTTTTAGTC........................................................251.000.00--1.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTCACG.....................................................311.000.001.00-----------------------
............................................................................................................................................................................TTTTCTTTTCTTTTTTTTTTTTTTTTACG.................................................291.000.001.00-----------------------
................................................................................................................................................................TGCTTTTTTTTCTTTTCTTTTTCAT.................................................................251.000.00--1.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTAACG..........................................................261.000.00--1.00---------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTCTA.................................................341.000.00----1.00-------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTCGAG........................................................301.000.00--1.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTCGG........................................................281.000.00-----1.00------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTCCAG.......................................................291.000.00-1.00----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTAAG.........................................................291.000.00---1.00--------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTAAG................................................................211.000.001.00-----------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTCCG.........................................................281.000.00------1.00-----------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTTTTAG........................................................321.000.00-1.00----------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTCTCG........................................................281.000.00----1.00-------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTAAC..............................................................261.000.00-----1.00------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTAC.........................................................271.000.00--1.00---------------------
......................................................................................................TGTGGTTGGTGGTTGTGTTGT...............................................................................................................................2121.000.50-------------1.00----------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTACG.........................................................261.000.00----1.00-------------------
..............................................................................................................................................................................TTCTTTTCTTTTTTTTTTTTTTTTAAAAG...............................................291.000.00------1.00-----------------
...............................................................................................................................................................ATGCTTTTTTTTCTTTTCAACC.....................................................................221.000.00--1.00---------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTACAG..............................................................261.000.00---1.00--------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTCAGG........................................................281.000.00--1.00---------------------
............................................................................................................................................................................TTTTCTTTTCTTTTTTTTTTTTTTTTAACCC...............................................311.000.001.00-----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTCGG......................................................321.000.00--1.00---------------------
.............................................................................................................................................................................TTTCTTTTCTTTTTTTTTTTTTTTTAGATC...............................................301.000.00--1.00---------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTGCG..........................................................281.000.00--1.00---------------------
...........................................................................................................................................................................CTTTTCTTTTCTTTTTTTTTTTTTCACG...................................................281.000.00---1.00--------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTATCG.....................................................311.000.001.00-----------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTAGTT.......................................................291.000.00--1.00---------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTCGG....................................................281.000.00---1.00--------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTATG........................................................291.000.00---1.00--------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTTTCCCG...................................................321.000.00-1.00----------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTCATG.......................................................321.000.00---1.00--------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTAGGC.........................................................291.000.00--1.00---------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTCATG......................................................321.000.00-1.00----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTAG...............................................................251.000.00-1.00----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTAATG.........................................................291.000.00-1.00----------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTCAG..................................................351.000.001.00-----------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTCTAG.......................................................291.000.001.00-----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTATG.............................................................251.000.00---1.00--------------------
...................................................................................................................................................................................TTCTTTTTTTTTTTTTTTTAGATCAAG............................................271.000.00-1.00----------------------
......................................................................................................TGTGGTTGGTGGTTGTGTAGT...............................................................................................................................2121.000.50-----------------1.00------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTTGCA.....................................................321.000.00-----1.00------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTGCT.............................................................261.000.00--1.00---------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTTTCGAG...................................................321.000.00--1.00---------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCGTCT.....................................................................191.000.00------1.00-----------------
.................................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTTAGATTT..............................................271.000.00---1.00--------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTACA......................................................291.000.00-1.00----------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTTTCGCC...................................................321.000.00--1.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTTCTTG...................................................331.000.00----1.00-------------------
........................................................................................................................................................................TTTCTTTTCTTTTCTTTTTTTTTTTTTCTCC...................................................311.000.00-----1.00------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTCCAC...................................................................211.000.00------1.00-----------------
.................................................................................................................................................................GCTTTTTTTTCTTTTCTTTTCTTTTGG..............................................................271.000.00--1.00---------------------
......................................................................................................TGTGGTTGGTGGTTGTATTT................................................................................................................................201.000.00---------------------1.00--
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTTTTTTCTAG...................................................321.000.00---1.00--------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTCAG.........................................................301.000.00-1.00----------------------
...........................................................................................................................................................................CTTTTCTTTTCTTTTTTTTTTTTTTTTAATTG...............................................321.000.001.00-----------------------
...............................................................................................................................................................................TCTTTTCTTTTTTTTTTTTTTTTATCAG...............................................281.000.00---1.00--------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTTCG.......................................................321.000.00-1.00----------------------
........................................................................................................................................................................TTTCTTTTCTTTTCTTTTTTTTACG.........................................................251.000.00----1.00-------------------
...................................................................................................................................................................................TTCTTTTTTTTTTTTTTTTAGATCTC.............................................261.000.00-1.00----------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTACT.....................................................341.000.00-1.00----------------------
............................................................................................................................................................................TTTTCTTTTCTTTTTTTTTTTTTTTTATCG................................................301.000.00---1.00--------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCAGAG................................................................241.000.00--1.00---------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTCGAG.....................................................321.000.00--1.00---------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTTTTACC.................................................311.000.00------1.00-----------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTAACT...........................................................291.000.001.00-----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTCAT.........................................................291.000.00-1.00----------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTAGTT.......................................................301.000.00--1.00---------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTACCC...........................................................261.000.00--1.00---------------------
.................................................................................................................................................................GCTTTTTTTTCTTTTCTTTTCTTTCCTT.............................................................281.000.00--1.00---------------------
.............................................................................................................................................................................TTTCTTTTCTTTTTTTTTTTTTTTTACACA...............................................301.000.001.00-----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTAAAG.........................................................311.000.00---1.00--------------------
..............................................................................................................................................................................TTCTTTTCTTTTTTTTTTTTTTTTACG.................................................271.000.00----1.00-------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTCAG.........................................................291.000.00---1.00--------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTCCCG.........................................................301.000.00---1.00--------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTCG..........................................................281.000.001.00-----------------------
......................................................................................................TGTGGTTGGTGGTTGTGTGGG...............................................................................................................................2121.000.50--------------------1.00---
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTCAT.....................................................311.000.001.00-----------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTTCCTG...................................................331.000.00--1.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTCTCG.......................................................291.000.00-1.00----------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTAAA........................................................311.000.00-1.00----------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTCAG....................................................351.000.00----1.00-------------------
...............................................................................................................................................................................TCTTTTCTTTTTTTTTTTTTTTTACCC................................................271.000.00---1.00--------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTCG...........................................................291.000.00-1.00----------------------
........................................................................................................................................................................TTTCTTTTCTTTTCTTTTTTTTTTTTTTTTACCAG...............................................351.000.00---1.00--------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTGCTT.....................................................331.000.00--1.00---------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTCG........................................................301.000.00---1.00--------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTATTG.......................................................321.000.001.00-----------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTCTG.......................................................321.000.00-1.00----------------------
...........................................................................................................................................................................CTTTTCTTTTCTTTTTTTTTTTTTCGGG...................................................281.000.00--1.00---------------------
...............................................................................................................................................................ATGCTTTTTTTTCTTTTCTTTGGAG..................................................................251.000.00-----1.00------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTGGC.............................................................261.000.00--1.00---------------------
...................................................................................................................................................................................................TTTAGATTGGCAAACTTG.....................................181.000.00-------------------1.00----
.........................................................................................................................................................................TTCTTTTCTTTTCTTTTTTTTTTACCC......................................................271.000.00-----1.00------------------
.................................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTTAGGGGG..............................................271.000.00--1.00---------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTGGG......................................................321.000.00--1.00---------------------
...........................................................................................................................................................................CTTTTCTTTTCTTTTTTTTTTAGTC......................................................251.000.00--1.00---------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTATTG.........................................................281.000.00---1.00--------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTACAG.....................................................311.000.00-1.00----------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTCAG..........................................................291.000.00---1.00--------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTCTC.........................................................281.000.00--1.00---------------------
......................................................................................................TGTGGTTGGTGGTTGTAA..................................................................................................................................181.000.00-----------1.00------------
...........................................................................................................................................................................CTTTTCTTTTCTTTTTTTTTTATTG......................................................251.000.00-1.00----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTATTG.......................................................311.000.001.00-----------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTCGT....................................................281.000.00----1.00-------------------
................................................................................................................................................................................CTTTTCTTTTTTTTTTTTTTTTAGACC...............................................271.000.00--1.00---------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTATAG...........................................................271.000.001.00-----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCAATT................................................................241.000.00--1.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTGGG............................................................241.000.00--1.00---------------------
........................................................................................................................................................................TTTCTTTTCTTTTCTTTTTTTTTTTTTCGGG...................................................311.000.00-----1.00------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTCGAG.......................................................311.000.00--1.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTCCTG.....................................................311.000.00---1.00--------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTACG......................................................311.000.00----1.00-------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTGTGG...........................................................261.000.00--1.00---------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTCAT.....................................................341.000.00-1.00----------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTCCG........................................................291.000.00---1.00--------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTTAT......................................................311.000.00----1.00-------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTCATG......................................................331.000.00---1.00--------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTAGGT.........................................................291.000.00--1.00---------------------
.............................................................................................................................................................................................TTTTTTTTTAGATTGTGCG..........................................191.000.00--1.00---------------------
......................................................................................................TGTGGTTGGTGGTTGTATTG................................................................................................................................201.000.00-------1.00----------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTAATG...............................................................231.000.00-1.00----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTCCG.........................................................291.000.00---1.00--------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTCCG........................................................311.000.00-1.00----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTTCAG.........................................................311.000.00------1.00-----------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTTTTATCTG...............................................331.000.001.00-----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTATTT....................................................341.000.00----1.00-------------------
.........AAAATGGCCAGTAGTCTG...............................................................................................................................................................................................................................181.000.00----------------1.00-------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTCCAG.......................................................301.000.00--1.00---------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTTTTTTTAAATG...............................................331.000.001.00-----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTATTT.........................................................311.000.00------1.00-----------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTTATT.....................................................321.000.00-1.00----------------------
...............................................................................................................................................................................TCTTTTCTTTTTTTTTTTTTTTTAGACC...............................................281.000.00--1.00---------------------
......................................................................................................TGTGGTTGGTGGTTGTGGTGTT..............................................................................................................................221.000.00--------------1.00---------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTCAG...................................................351.000.001.00-----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTAAG.....................................................351.000.00-1.00----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTCTC.....................................................331.000.00-----1.00------------------
...............................................................................................................................................................................TCTTTTCTTTTTTTTTTTTTTTTAGGGC...............................................281.000.00--1.00---------------------
..............................................................................................................................................................................TTCTTTTCTTTTTTTTTTTTTTTTAACCG...............................................291.000.00---1.00--------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTAATG......................................................301.000.00-1.00----------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTTCTC....................................................321.000.00-1.00----------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTTTGCAG.................................................................231.000.00--1.00---------------------
..................................................................................................................................................................CTTTTTTTTCTTTTCTTCTTG...................................................................211.000.00-1.00----------------------
........................................................................................................................................................................TTTCTTTTCTTTTCTTTTTTTTTTATAG......................................................281.000.00---1.00--------------------
........................................................................................................................................................................TTTCTTTTCTTTTCTTTTTTTTTTTTTCGG....................................................301.000.00----1.00-------------------
................................................................................................................................................................................CTTTTCTTTTTTTTTTTTTTTTAGAGGT..............................................281.000.00--1.00---------------------
...............................................................................................................................................................................TCTTTTCTTTTTTTTTTTTTTTTAGGGT...............................................281.000.00--1.00---------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTAAG.......................................................321.000.00---1.00--------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTCCCC....................................................321.000.00--1.00---------------------
.................................................................................................................................................................................TTTTCTTTTTTTTTTTTTTTTACGTG...............................................261.000.00------1.00-----------------
......................................................................................................TGTGGTTGGTGGTTGTAC..................................................................................................................................181.000.00--------1.00---------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTTCTTG....................................................331.000.00---1.00--------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTACC............................................................271.000.00--1.00---------------------
............................................................................................................................................................................TTTTCTTTTCTTTTTTTTTTTTTTTTATGG................................................301.000.001.00-----------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTGCG........................................................301.000.00--1.00---------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTCTC..........................................................291.000.00-----1.00------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTCCCC..............................................................251.000.00-----1.00------------------
...............................................................................................................................................................................TCTTTTCTTTTTTTTTTTTTTTTACATA...............................................281.000.00--1.00---------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTCGAG.....................................................311.000.00--1.00---------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTAGTT......................................................321.000.00-----1.00------------------
.................................................................................................................................................................GCTTTTTTTTCTTTTCTTTTCTTTCC...............................................................261.000.00--1.00---------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTCCTC.........................................................301.000.00-----1.00------------------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTTTCTCG...................................................331.000.001.00-----------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTAGGC.........................................................281.000.00-----1.00------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTAACT............................................................251.000.00----1.00-------------------
.................................................................................................................................................................................................................................AGCATAGAGACCCCCAAC.......181.000.00---------------1.00--------
......................................................................................................................................................................TTTTTCTTTTCTTTTCTTTTTTTTTTTATAT.....................................................311.000.001.00-----------------------
..........................................................................................................................................................................TCTTTTCTTTTCTTTTTTTTTTATTG......................................................261.000.00---1.00--------------------
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTGTG........................................................291.000.00-----1.00------------------
...............................................................................................................................................................ATGCTTTTTTTTCTTTTCTTTTCTC..................................................................251.000.00-----1.00------------------
...........................................................................................................................................................................CTTTTCTTTTCTTTTTTTTTTTTTCGCG...................................................281.000.00--1.00---------------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTCGAG..............................................................251.000.00--1.00---------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTCAAG.....................................................331.000.00---1.00--------------------
............................................................................................................................................................................TTTTCTTTTCTTTTTTTTTTTTTTTTACGG................................................301.000.00----1.00-------------------
............................................................................................................................................................................TTTTCTTTTCTTTTTTTTTTTTTTTTACGAG...............................................311.000.00------1.00-----------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTCGA...............................................................241.000.00------1.00-----------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTGTTT......................................................321.000.00------1.00-----------------
...................................................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTTTTTTAG........................................................311.000.00---1.00--------------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTATG.........................................................291.000.00-1.00----------------------
......................................................................................................TGTGGTTGGTGGTTGTATGG................................................................................................................................201.000.00--------1.00---------------
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTCTTG....................................................341.000.00-1.00----------------------
.......................................................................................................................................................................TTTTCTTTTCTTTTCTTTTTTTTACC.........................................................261.000.00--1.00---------------------
......................................................................................................TGTGGTTGGTGGTTGTG...................................................................................................................................1720.500.50----------------------0.50-
.....................................................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTAG..................................................3550.200.20---0.20--------------------
............................................................................................................TGGTGGTTGTGGTGGTGGC...........................................................................................................................1970.140.14-----------------------0.14
....................................................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTA...................................................3570.140.14-0.14----------------------

Antisense strand
GCATTGTTCAAAATGGCCAGTAGTTAAGAGAGTTGCTTTGGCTTTCTGCCCAGGATAGTGTTAAAATACAGTGGCAATTCAATAAATGTCATCAGTGGTGTCTGTGGTTGGTGGTTGTGGTGGTGGCAGATCAAGAATTGTCCTGAATTATTCTAATGGATGCTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTAGATTGGCAAACGCACTGCCTACTTACAGCATAGAGACCCCCAGTGGAGAGC
.................................................................................................((((((((....(((((((....(((.(((((........)))))))))))))))...)))))))).......................................................................................
.................................................................................................98.......................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR040012(GSM532897)
G648N. (cervix)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR040010(GSM532895)
G529N. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040016(GSM532901)
G645N. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189785TAX577739(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................ATCAAGAATTGTCCTAC........................................................................................................ 172.000.00---------2.00--------------
...........................................................................................................................................GTCCTGAATTATTCTGGAT............................................................................................ 191.000.00------------1.00-----------