ID: uc001mup.3_intron_13_0_chr11_33631513_f.3p
GENE: (14)
chr11:33639879-33640128+


(1)
B-CELL 		(7)
BRAIN 		(6)
BREAST 		(3)
CELL-LINE 		(1)
FIBROBLAST 		(2)
HEART 		(2)
LIVER 		(2)
OTHER 		(4)
SKIN 		(1)
TESTES

Sense strand
ATGATTACAGCATCTGGAAAAAAAAAAATCTTTATTTCACTCTTTCTACAGCCCCTTATATCCTGGGAATAAATGCCATCAATTCTGAGATTTGTGAGGCAAATCCAAACCCTTCATTGGTTGCCTGTACTTTGGATCAGTGGAGAATTCCATCTGTCAGGGCATTTGCTGCATCATAACAGTTGTTGAATTTTCTTCAGGCAACAGATGAAGAACTCTGTCTACAGAAGCCGGCAGTCTCTGAACAGCC
.............................................................................................................................................(((((((((((.((((....(((.....)))......)))).))..)))))))))......................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
.................................................................................................................................................................................AACAGTTGTTGAATTTTCTTCAG..................................................23114.0014.0014.00------------------------------
.................................................................................................................................................................................AACAGTTGTTGAATTTTCTTCA...................................................22111.0011.0010.00-------------------1.00----------
.................................................................................................................................................................................AACAGTTGTTGAATTTTCTTCAGT.................................................2418.0014.001.005.00---1.00-------------1.00-----------
................................................................................................................................................................................................................TGAAGAACTCTGTCTACAGAAGCCGGC...............2713.003.00--2.00-----1.00----------------------
................................................................................................................................................................................TAACAGTTGTTGAATTTTCTTCAGT.................................................252.000.001.00-----------------------1.00------
................................................................................................................................................................................TAACAGTTGTTGAATTTTCTTCA...................................................2312.002.001.00-----------------1.00------------
..................................................................................................................................................................................ACAGTTGTTGAATTTTCTTCAG..................................................2212.002.002.00------------------------------
.................................................................................................................................................................................................................................AGAAGCCGGCAGTCTCTGAACAG..2312.002.00---2.00---------------------------
................................................................................................................................................................................TAACAGTTGTTGAATTTTCT......................................................2012.002.00----------1.00-1.00------------------
................................................................................................................................................................................TAACAGTTGTTGAATTTTCTTC....................................................2211.001.00----------------1.00--------------
.............................................................................................................................................................................................................................CTACAGAAGCCGGCAGTCTCTGAACA...2611.001.00--------1.00----------------------
........................................................................................................................................................................................................GCAACAGATGAAGAACTC................................1811.001.00-----------------------1.00-------
....................................................................................................................................TGGATCAGTGGAGAATC.....................................................................................................171.000.00-------1.00-----------------------
..................................................................................................................................TTTGGATCAGTGGAGGGGC.....................................................................................................191.000.00----------------------1.00--------
....................................................................................................................................................................................AGTTGTTGAATTTTCTTCA...................................................1911.001.001.00------------------------------
......................................................................................................................................................................................................................................CCGGCAGTCTCTGAACTCTG201.000.00-------------------------1.00-----
.................................................................................................................................................................................AACAGTTGTTGAATTTTCTTCAA..................................................2311.0011.001.00------------------------------
..........................................................................................................................................AGTGGAGAATTCCATCTGTCAGA.........................................................................................2311.001.00------------------------------1.00
..........................................................................................................................................AGTGGAGAATTCCATCTGTCAG..........................................................................................2211.001.00-----------1.00-------------------
..................................................................................................................................................................................................................................GAAGCCGGCAGTCTCTGAACA...2111.001.00---------1.00---------------------
......ACAGCATCTGGAAAATGAA.................................................................................................................................................................................................................................191.000.00----------------------------1.00--
.................................................................................................................................................................................AACAGTTGTTGAATTTTCTT.....................................................2011.001.001.00------------------------------
............................TCTTTATTTCACTCTTTTCCG.........................................................................................................................................................................................................211.000.00----1.00--------------------------
................................................................................................................................................................................................................TGAAGAACTCTGTCTACAGAAGCCGG................2611.001.00--1.00----------------------------
..........................................TTTCTACAGCCCCTTGGTC.............................................................................................................................................................................................191.000.00----1.00--------------------------
..........................................................................................................................................................................................................AACAGATGAAGAACTCTGTCTACAGAAGCCGG................3211.001.00------1.00------------------------
........................................................................................................................................................TCTGTCAGGGCATTTGCTGCAT............................................................................2211.001.00---------1.00---------------------
.....................................................................................................................................................................................GTTGTTGAATTTTCTTCAG..................................................1911.001.001.00------------------------------
.................................................................................................................................................................................................................GAAGAACTCTGTCTACAGAAGCCGGCA..............2711.001.00------1.00------------------------
.......................................................................................................................................................................................................................................CGGCAGTCTCTGAACTCTG191.000.00---------------------1.00---------
..........................................................................................................................................................................................................AACAGATGAAGAACTCTG..............................1811.001.00---------------------------1.00---
..............................................................................................................................................................................................................GATGAAGAACTCTGTCTACAGAAGC...................2511.001.00--------------------------1.00----
...............................................................................................................................................................................................................ATGAAGAACTCTGTCTACAGAAGCCG.................2611.001.00-----------------------------1.00-
......................................................................................................................................................................................................AGGCAACAGATGAAGAACT.................................1911.001.00-----1.00-------------------------
.................................................................................................................................................................................................................GAAGAACTCTGTCTA..........................1580.120.12--0.12----------------------------

Antisense strand
ATGATTACAGCATCTGGAAAAAAAAAAATCTTTATTTCACTCTTTCTACAGCCCCTTATATCCTGGGAATAAATGCCATCAATTCTGAGATTTGTGAGGCAAATCCAAACCCTTCATTGGTTGCCTGTACTTTGGATCAGTGGAGAATTCCATCTGTCAGGGCATTTGCTGCATCATAACAGTTGTTGAATTTTCTTCAGGCAACAGATGAAGAACTCTGTCTACAGAAGCCGGCAGTCTCTGAACAGCC
.............................................................................................................................................(((((((((((.((((....(((.....)))......)))).))..)))))))))......................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
............................................................................................................................................................................................................CAGATGAAGAACTCTATG............................ 182.000.00-------------1.00-1.00---------------
.........................................CTTTCTACAGCCCCTGGCT.............................................................................................................................................................................................. 191.000.00-------1.00-----------------------
..............TGGAAAAAAAAAAATCCTCT........................................................................................................................................................................................................................ 201.000.00-----------------1.00-------------
.........................................CTTTCTACAGCCCCTTCGGC............................................................................................................................................................................................. 201.000.00--------------1.00----------------