ID: uc001mud.2_intron_5_0_chr11_33080642_f.5p
GENE: (6)
chr11:33080592-33080841+


(1)
BRAIN
(1)
BREAST
(7)
CELL-LINE
(2)
CERVIX
(1)
HEART
(2)
LIVER
(4)
OTHER
(4)
SKIN
(1)
TESTES

Sense strand
AGTTGAATACGAAAGGAAGAAGTTTCAAGAGATTTTGGAGAGGCAACCAAGTATGTTGAATATTTTGTGGTACTTTTTTTGTTGTCTGTGGTTTTTCATTTTAGCTGCCATAGCTTGTTGCATAATATTATTTTCAGAACAAAACTAAAATTTAGTAGGAGAATAGTCTAATTTGAAGAAGGAAAAGCACAAAATGTTGGGACTACATCTAGAGTTGTTAAGCATTGAAAAGAAAACTTAATTCACAAGC
............................................................(((((((((...(((((((.((((.(((((((..............))))))).............(((((((((...((.(((......))).))..))))))))).))))..)))))))......)))))))))......................................................
............................................................61.........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189784SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189787SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040039(GSM532924)
G531T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343335SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.................................................................TGTGGTACTTTTTTTTAG.......................................................................................................................................................................1812.000.0012.00----------------------
.................................................................TGTGGTACTTTTTTTTATG......................................................................................................................................................................195.000.005.00----------------------
.................................................................TGTGGTACTTTTTTTTATA......................................................................................................................................................................195.000.005.00----------------------
...........................AGAGATTTTGGAGAGGCAA............................................................................................................................................................................................................1914.004.00-4.00---------------------
.................................................................TGTGGTACTTTTTTTGTTG......................................................................................................................................................................1913.003.002.00--1.00-------------------
.................................................................TGTGGTACTTTTTTTTCG.......................................................................................................................................................................183.000.003.00----------------------
.................................................................TGTGGTACTTTTTTTGTTGTTC...................................................................................................................................................................222.000.002.00----------------------
................................................................................................................................................................................AGAAGGAAAAGCACAATTG.......................................................192.000.00------2.00----------------
................................................................................................................................................................................AGAAGGAAAAGCACATC.........................................................1702.001.00----2.00------------------
.................................................................TGTGGTACTTTTTTTG.........................................................................................................................................................................1661.331.331.33----------------------
..................................................................................................................................................................ATAGTCTAATTTGAAGAGC.....................................................................191.000.00------------1.00----------
.......................TTCAAGAGATTTTGGAGAGGCAAC...........................................................................................................................................................................................................2411.001.00--1.00--------------------
..............................................CCAAGTATGTTGAATGC...........................................................................................................................................................................................171.000.00--------1.00--------------
.................................................................TGTGGTACTTTTTTTTTGG......................................................................................................................................................................191.000.001.00----------------------
...............................................................................................................................................................................AAGAAGGAAAAGCACAATTG.......................................................201.000.00----------------1.00------
.......................TTCAAGAGATTTTGGAGAGG...............................................................................................................................................................................................................2011.001.00-----------------1.00-----
...TGAATACGAAAGGAAGAAGTTTCA...............................................................................................................................................................................................................................2411.001.00--1.00--------------------
.................................................................TGTGGTACTTTTTTTGTGTTT....................................................................................................................................................................211.000.001.00----------------------
.................................................................TGTGGTACTTTTTTTTTAT......................................................................................................................................................................191.000.001.00----------------------
.................................................................TGTGGTACTTTTTTTTAC.......................................................................................................................................................................181.000.001.00----------------------
.............AGGAAGAAGTTTCAAATAA..........................................................................................................................................................................................................................191.000.00---------1.00-------------
........................................................................................................................................................TAGTAGGAGAATAGTCTAATTTGAAGAA......................................................................2811.001.00--1.00--------------------
................................................................................................................................................................................................AATGTTGGGACTACAGGAG.......................................191.000.00-----1.00-----------------
................................................................................................................................................................................AGAAGGAAAAGCACA...........................................................1501.001.00--------------1.00--------
..........................................................................TTTTTTGTTGTCTGTTTGA.............................................................................................................................................................191.000.00-----1.00-----------------
........ACGAAAGGAAGAAGTTTCAAGAGATT........................................................................................................................................................................................................................2611.001.00----------1.00------------
.................................................................TGTGGTACTTTTTTTGTTC......................................................................................................................................................................1921.000.50-------1.00---------------
.................................................................TGTGGTACTTTTTTTTACA......................................................................................................................................................................191.000.001.00----------------------
.................................................................TGTGGTACTTTTTTTTGTG......................................................................................................................................................................191.000.001.00----------------------
.................AGAAGTTTCAAGAGATTTTGGAGAGG...............................................................................................................................................................................................................2611.001.00------------------1.00----
...........AAAGGAAGAAGTTTCG...............................................................................................................................................................................................................................161.000.001.00----------------------
.................................................................TGTGGTACTTTTTTTATAG......................................................................................................................................................................191.000.001.00----------------------
..............................................................................................................................................................................................AAAATGTTGGGACTACATC.........................................1911.001.00-------------------1.00---
.................................................................TGTGGTACTTTTTTTTT........................................................................................................................................................................171.000.00---------------1.00-------
........................................................................................................................................................................................................................................AAAACTTAATTCACAAG.1720.500.50--------------------0.50--
.................................................................TGTGGTACTTTTTTTGTTTT.....................................................................................................................................................................2020.500.500.50----------------------
.................................................................TGTGGTACTTTTTTTGTT.......................................................................................................................................................................1820.500.500.50----------------------
.................................................................TGTGGTACTTTTTTTGTTCTTT...................................................................................................................................................................2220.500.500.50----------------------
.....................................................................................................................................................................GTCTAATTTGAAGAAG.....................................................................1620.500.50---------------------0.50-
.................................................................TGTGGTACTTTTTTTGATC......................................................................................................................................................................1960.331.330.17------0.17---------------
.................................................................TGTGGTACTTTTTTTGG........................................................................................................................................................................1760.171.330.17----------------------
.................................................................TGTGGTACTTTTTTTGCTC......................................................................................................................................................................1960.171.33-------0.17---------------
.................................................................TGTGGTACTTTTTTTGGTG......................................................................................................................................................................1960.171.330.17----------------------
...........................................................................TTTTTGTTGTCTGTGGT..............................................................................................................................................................1770.140.14----------------------0.14

Antisense strand
AGTTGAATACGAAAGGAAGAAGTTTCAAGAGATTTTGGAGAGGCAACCAAGTATGTTGAATATTTTGTGGTACTTTTTTTGTTGTCTGTGGTTTTTCATTTTAGCTGCCATAGCTTGTTGCATAATATTATTTTCAGAACAAAACTAAAATTTAGTAGGAGAATAGTCTAATTTGAAGAAGGAAAAGCACAAAATGTTGGGACTACATCTAGAGTTGTTAAGCATTGAAAAGAAAACTTAATTCACAAGC
............................................................(((((((((...(((((((.((((.(((((((..............))))))).............(((((((((...((.(((......))).))..))))))))).))))..)))))))......)))))))))......................................................
............................................................61.........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189784SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189787SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040039(GSM532924)
G531T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343335SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
...........................TGCCTCTCCAAAATCTCT............................................................................................................................................................................................................. 1811.001.00-----------1.00-----------
...............................ATTTTGGAGAGGCAAATTG........................................................................................................................................................................................................ 191.000.00---1.00-------------------
......................................................................................................................................CAGAACAAAACTAAAGGTT................................................................................................. 191.000.00-------------1.00---------
.....................................................................................................................................................................................................................................TGAATTAAGTTTTCTT..... 1680.120.12--------0.12--------------