ID: uc001mud.2_intron_3_0_chr11_33078782_f.5p
GENE: (4)
chr11:33078732-33078981+


(7)
BRAIN
(4)
BREAST
(7)
CELL-LINE
(1)
CERVIX
(1)
HEART
(2)
LIVER
(2)
OTHER
(8)
SKIN
(1)
TESTES

Sense strand
ATCCCCCAGCATATGACCATGCTATCAAACTTGTAGGAGAAATCAAAGAGGTGAGGCAAAGAGTGAATTGTGATGCTTTTCTGGTGTGTTAGGAGTGTTTATTCAACTTCTTGTGTCACCACCAGAAGACTTTAAAGAAATTGAAGGATCAAGAAGTTAAAGTACTTGCCAGAAGGTGGATCAAGAGTGTTTTTGGCTTAATGCCCTTTTTTAAAAAAAAGTTTTAAGCAAACCATGATAACCTGAAGGC
............................................................................((((((((((((..((((((.........)))))).....))).)))))))))((((((.....))))))........................................................................................................
...........................................................................76................................................................................158..........................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR029128(GSM416757)
H520. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR037937(GSM510475)
293cand2. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................AAAGAAATTGAAGGATCTTCT................................................................................................21140.0020.0010.002.004.0016.00-2.00-3.00-1.00-----2.00------------------
.....................................................................................................................................AAAGAAATTGAAGGATCT...................................................................................................18134.0020.008.0010.0010.00--4.00--------2.00-------------------
.....................................................................................................................................AAAGAAATTGAAGGATCTT..................................................................................................19124.0020.005.004.006.003.00-4.00---2.00------------------------
.....................................................................................................................................AAAGAAATTGAAGGATC....................................................................................................17120.0020.004.006.00--10.00-----------------------------
.....................................................................................................................................AAAGAAATTGAAGGATCTTC.................................................................................................20117.0020.007.008.001.001.00------------------------------
.......................ATCAAACTTGTAGGAGAAATCA.............................................................................................................................................................................................................2214.004.00------2.00----2.00----------------------
...................................................................................................................................TTAAAGAAATTGAAGGATCAAGAAGTT............................................................................................2713.003.00--------3.00-------------------------
...........TATGACCATGCTATCAAACTTGTAGG.....................................................................................................................................................................................................................2612.002.00----------2.00-----------------------
........GCATATGACCATGCTATCA...............................................................................................................................................................................................................................1912.002.00----------------2.00-----------------
.....................................................................................................................................AAAGAAATTGAAGGATCTCT.................................................................................................2011.0020.00-1.00--------------------------------
........................TCAAACTTGTAGGAGAAATCAAAGAGA.......................................................................................................................................................................................................271.000.00----------1.00-----------------------
.....................................................................................................................................AAAGAAATTGAAGGATCTTAT................................................................................................2111.0020.00--1.00-------------------------------
..............................................................................................................................................GAAGGATCAAGAAGTTAAAG........................................................................................2011.001.00----------------------1.00-----------
.....................CTATCAAACTTGTAGGAGAAATCAAAGAG........................................................................................................................................................................................................2911.001.00-----------------------1.00----------
.....................................................................................................................................AAAGAAATTGAAGGATCTTA.................................................................................................2011.0020.00--1.00-------------------------------
.......................ATCAAACTTGTAGGAGAA.................................................................................................................................................................................................................1821.001.00-------------------------------0.500.50-
................................................................................CTGGTGTGTTAGGAGCTG........................................................................................................................................................181.000.00-------------------1.00--------------
...............ACCATGCTATCAAACTTGT........................................................................................................................................................................................................................1911.001.00--------------------1.00-------------
..................................................................................GGTGTGTTAGGAGTGTTT......................................................................................................................................................1811.001.00---------------------------1.00------
......................................................................................................................................AAGAAATTGAAGGATCAAGA................................................................................................2011.001.00--------------------------1.00-------
.......................ATCAAACTTGTAGGAGAAATCAAAGAGACT.....................................................................................................................................................................................................3011.001.00------------1.00---------------------
.....................................................................................................................................AAAGAAATTGAAGGACTTG..................................................................................................191.000.00--1.00-------------------------------
.....................................................................................................................................AAAGAAATTGAAGGATCTTCA................................................................................................2111.0020.00---1.00------------------------------
......................TATCAAACTTGTAGGAGAAATCA.............................................................................................................................................................................................................2311.001.00-----------1.00----------------------
......................................................................................................................................AAGAAATTGAAGGATCT...................................................................................................171.000.00-1.00--------------------------------
......................TATCAAACTTGTAGGAGAAATCAAAGAGACTC....................................................................................................................................................................................................321.000.00------------1.00---------------------
......................TATCAAACTTGTAGGAGAAATC..............................................................................................................................................................................................................2211.001.00------1.00---------------------------
.......................................................................................................................................AGAAATTGAAGGATCTTC.................................................................................................181.000.001.00---------------------------------
.......................................................................................................................................AGAAATTGAAGGATCTTCT................................................................................................191.000.001.00---------------------------------
.........................................................AAAGAGTGAATTGTGATG...............................................................................................................................................................................1811.001.00------------------1.00---------------
......................................................................................................................................AAGAAATTGAAGGATTTTT.................................................................................................191.000.00-------------------------1.00--------
..........................AAACTTGTAGGAGAAATCA.............................................................................................................................................................................................................1911.001.00----------------------------1.00-----
.......................ATCAAACTTGTAGGAGAAATCAAAGAG........................................................................................................................................................................................................2711.001.00------------------------1.00---------
............................ACTTGTAGGAGAAATCAAAGAGGTGAGG..................................................................................................................................................................................................2811.001.00---------------------1.00------------
.....................................................................................................................................AAAGAAATTGAAGGATCTCTT................................................................................................2111.0020.00--1.00-------------------------------
.......................ATCAAACTTGTAGGAGA..................................................................................................................................................................................................................1721.001.00------0.50-----0.50---------------------
.......................ATCAAACTTGTAGGAGAACT...............................................................................................................................................................................................................2020.501.00------------------------------0.50---
..............................................................................................................................AGACTTTAAAGAAATTGA..........................................................................................................1820.500.50-----------------------------0.50----
................................GTAGGAGAAATCAAAG..........................................................................................................................................................................................................1650.200.20---------------------------------0.20

Antisense strand
ATCCCCCAGCATATGACCATGCTATCAAACTTGTAGGAGAAATCAAAGAGGTGAGGCAAAGAGTGAATTGTGATGCTTTTCTGGTGTGTTAGGAGTGTTTATTCAACTTCTTGTGTCACCACCAGAAGACTTTAAAGAAATTGAAGGATCAAGAAGTTAAAGTACTTGCCAGAAGGTGGATCAAGAGTGTTTTTGGCTTAATGCCCTTTTTTAAAAAAAAGTTTTAAGCAAACCATGATAACCTGAAGGC
............................................................................((((((((((((..((((((.........)))))).....))).)))))))))((((((.....))))))........................................................................................................
...........................................................................76................................................................................158..........................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR029128(GSM416757)
H520. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR037937(GSM510475)
293cand2. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................................................................................................................................................ATGCCCTTTTTTAAAAAAAAAAA........................... 232.000.00-------------2.00--------------------
............................................................................TTTTCTGGTGTGTTATATG........................................................................................................................................................... 191.000.00-----------------1.00----------------