ID: uc001mqb.2_intron_9_0_chr11_20448412_f.3p
GENE: (10)
chr11:20473476-20473725+


(1)
B-CELL
(2)
BRAIN
(1)
BREAST
(8)
CELL-LINE
(3)
CERVIX
(3)
HEART
(1)
LIVER
(3)
OTHER
(2)
SKIN

Sense strand
TCTGGGTTCACTTTATAAGCTGGCCTGATTTTCCAATAACTTACTGCAAAAAAAAGTTTCAGATTTTGCAGAATATTATTACATCTGTGGCAGAAAAAAAAATATTCTGTAATTAAAAGAGTAGCACCGATGTTTAAATTGACCTGCTTATGAGAGTATTGCACATTTCTAAACTCTTTTTTTCCCCTTTTTTTATGCAGGGCTATTTTCTTCTGTTTGAGTCTATGTTAGATTCTGTCCTTTATGCAAA
..................................................((((((.........((((((((((((......((((...))))......))))))))))))..((((((((.....((((......))))...(((.(((....)))..))).........))))))))......))))))..........................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR040011(GSM532896)
G529T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR189784SRR040034(GSM532919)
G001N. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
...........................................................................................................................................................................AACTCTTTTTTTCCCCTTTTTCG........................................................239.000.00-3.001.003.00-2.00------------------
............................................................................................................................................................TATTGCACATTTCTAAGTTG..........................................................................209.000.006.00------2.00----1.00-----------
.............................................................................................................................................................................CTCTTTTTTTCCCCTTTCCTG........................................................219.000.00-2.005.001.001.00-------------------
...........................................................................................................................................................................AACTCTTTTTTTCCCCTTTTTC.........................................................223.000.00-2.00--1.00-------------------
............................................................................................................................................................TATTGCACATTTCTAAGCTG..........................................................................202.000.002.00-----------------------
...............................................................................................................................................................................................................................TATGTTAGATTCTGTCC..........1712.002.00---------2.00--------------
............................................................................................................................................................................ACTCTTTTTTTCCCCTTTTTCG........................................................222.000.00-1.00---1.00------------------
..............................................................................................................................................................................................................................CTATGTTAGATTCTGTCCTTTATGCAAA2812.002.00------2.00-----------------
...................................................................................................................................................................CATTTCTAAACTCTTTTAATA..................................................................211.000.00---------------1.00--------
.........................................................................................................................................................................TAAACTCTTTTTTTCGTT...............................................................181.000.00----1.00-------------------
............................................................................................................................................................TATTGCACATTTCTAATTTG..........................................................................201.000.001.00-----------------------
............................................................................................................................................................TATTGCACATTTCTAAGTTT..........................................................................201.000.00----------------------1.00-
............................................................................................................................................................TATTGCACATTTCTAAGTCG..........................................................................201.000.001.00-----------------------
.............................................................................................................................................................ATTGCACATTTCTAACCTG..........................................................................191.000.001.00-----------------------
...........................................................................................................................................................GTATTGCACATTTCTACG.............................................................................181.000.00--------------1.00---------
......................................................AGTTTCAGATTTTGCACATA................................................................................................................................................................................201.000.00------------------1.00-----
.............................................................................................................................................................................CTCTTTTTTTCCCCTTTTTCG........................................................211.000.00---1.00--------------------
...........................................................................................................................................................................................................................AGTCTATGTTAGATTCTGTCCTTTATGCAA.3011.001.00--------------------1.00---
...............................................................................................................................................................................................................................TATGTTAGATTCTGTCCC.........1811.002.00-----------------1.00------
...........................................................................................................................................................................AACTCTTTTTTTCCCCTTTTTCT........................................................231.000.00-1.00----------------------
.............................................................................................................................................................................CTCTTTTTTTCCCCTTTCCCG........................................................211.000.00---1.00--------------------
.................................................................................................................................................................................TTTTTTCCCCTTTTTTTATGTTTT.................................................241.000.00--------1.00---------------
............................................................................................................................................................TATTGCACATTTCTAAGCAG..........................................................................201.000.001.00-----------------------
.............................................................................................................................................................ATTGCACATTTCTAAGTTG..........................................................................191.000.001.00-----------------------
............................................................................................................................................................TATTGCACATTTCTACG.............................................................................171.000.00----------1.00-------------
...................................................................................................................................................................................................................................TTAGATTCTGTCCTTTATGCAAA2311.001.00-------------1.00----------
.............................................GCAAAAAAAAGTTTCAACT..........................................................................................................................................................................................191.000.00-----------1.00------------
....................................................................................................................................................TATGAGAGTATTGCAAAT....................................................................................181.000.001.00-----------------------
.............................................GCAAAAAAAAGTTTCAAAT..........................................................................................................................................................................................191.000.00----1.00-------------------
............................................................................................................................................................TATTGCACATTTCTAAGTT...........................................................................191.000.001.00-----------------------
................................................................................................................................................................................................................................ATGTTAGATTCTGTCCTTTATGCAAA2611.001.00---------------------1.00--
............................................................................................................................................................TATTGCACATTTCTAAGTTA..........................................................................201.000.001.00-----------------------
........................................................................................................................................................................................................................TTGAGTCTATGTTAGA..................1620.500.50-----------------------0.50
.........................................................................................................................................................................................................................TGAGTCTATGTTAGA..................1540.250.25------0.25-----------------
............................................................................................................................................................TATTGCACATTTCTAAAGTG..........................................................................2050.200.200.20-----------------------
............................................................................................................................................................TATTGCACATTTCTAAA.............................................................................1750.200.20----------0.20-------------

Antisense strand
TCTGGGTTCACTTTATAAGCTGGCCTGATTTTCCAATAACTTACTGCAAAAAAAAGTTTCAGATTTTGCAGAATATTATTACATCTGTGGCAGAAAAAAAAATATTCTGTAATTAAAAGAGTAGCACCGATGTTTAAATTGACCTGCTTATGAGAGTATTGCACATTTCTAAACTCTTTTTTTCCCCTTTTTTTATGCAGGGCTATTTTCTTCTGTTTGAGTCTATGTTAGATTCTGTCCTTTATGCAAA
..................................................((((((.........((((((((((((......((((...))))......))))))))))))..((((((((.....((((......))))...(((.(((....)))..))).........))))))))......))))))..........................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR040011(GSM532896)
G529T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR189784SRR040034(GSM532919)
G001N. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
......................................................................................GTGGCAGAAAAAAAAGGAA................................................................................................................................................. 191.000.00--------1.00---------------
.................................................................................................................TAAAAGAGTAGCACCGATG...................................................................................................................... 191.000.00-------------------1.00----
..................................................................................ATCTGTGGCAGAAAACGC...................................................................................................................................................... 181.000.00----------------1.00-------
.........................................................................................................................................ATTGACCTGCTTATGACGT.............................................................................................. 191.000.001.00-----------------------
.........................................................................................................................................ATTGACCTGCTTATGACCG.............................................................................................. 191.000.001.00-----------------------
.........................................................................................................................................ATTGACCTGCTTATGACGA.............................................................................................. 191.000.001.00-----------------------