ID: uc001mid.2_intron_6_0_chr11_9812231_r.5p
GENE: SBF2(5)
chr11:9817178-9817427-


(1)
AGO2.ip
(1)
BRAIN
(5)
BREAST
(3)
CELL-LINE
(7)
HEART
(1)
KIDNEY
(3)
LIVER
(1)
OTHER
(23)
SKIN
(1)
XRN.ip

Sense strand
TCGCTTTAAAACATTTCTCCTGGATTCAGACTATGAAAGATTAGAGCACGGTATGTGTCTGTATGCCCTTGTTTCATCTTTTTTGTTAGTTCTGCATGTTTTTAATGAAAATTCTAATAATGTAACTATCCCCAAGACTGACAAGCTGAGTTAAGGTTTAACTCTGAACTATGAATGTAGAGGAGTGGATAAGTGGCCAAATTCTGAAATTACGTGCCACGTTAGCTCTTAGCAGGTGGTCATTCCTATA
...................................................................................................................................................((((((.....))))))......................................................................................
................................................................................................................113.............................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
...........................................................................................................................................................GTTTAACTCTGAACTCTG.............................................................................1857.000.0019.004.006.002.005.002.001.002.001.002.00---1.002.00--2.001.00-----1.001.001.00-1.00-1.00-1.00-1.00----------
..........................................................................................................................................................GGTTTAACTCTGAACTCTG.............................................................................1941.000.0019.005.001.001.00--2.001.002.00--1.00----2.00--2.001.00-1.00--------1.00---1.00----1.00----
........................................................................................................................................................AAGGTTTAACTCTGAACTCTG.............................................................................213.000.00-1.00---1.00-----1.00---------------------------------
.........................................................................................................................................................AGGTTTAACTCTGAACTCTG.............................................................................203.000.00---2.00--------------1.00--------------------------
...................................................................................................................................................................CTGAACTATGAATGTACAGC...................................................................202.000.00------------1.00-----------------------1.00--------
.....................................................................................................................TAATGTAACTATCCCTAAA..................................................................................................................191.000.00-------------------------------------1.00-------
.......................ATTCAGACTATGAAAGATTAGAGCACGGAAC....................................................................................................................................................................................................311.000.00----------1.00----------------------------------
..................CCTGGATTCAGACTATGAAG....................................................................................................................................................................................................................201.000.00-------------------------------------------1.00-
.....................................................................................................................................................................................................CAAATTCTGAAATTAACA...................................181.000.00-----------------------------1.00---------------
.............................................................................................................................................................................AATGTAGAGGAGTGGATAAGTGGCCA...................................................2611.001.00---------------1.00-----------------------------
...................................................................................................................................................................CTGAACTATGAATGTCTG.....................................................................181.000.00---------------------------------1.00-----------
...................................................................................................................................................................CTGAACTATGAATGTATA.....................................................................181.000.00------------1.00--------------------------------
.............................ACTATGAAAGATTAGAGCACGG.......................................................................................................................................................................................................2211.001.00------------------------------------------1.00--
......................GATTCAGACTATGAAAGATTAGAG............................................................................................................................................................................................................2411.001.00---------------------------------------1.00-----
........................................................................................................................................................................................GTGGATAAGTGGCCAAATTCTGAAATTACGTGCC................................3411.001.00---------------------1.00-----------------------
.....................................................TGTGTCTGTATGCCCCGTT..................................................................................................................................................................................191.000.00-----------------------1.00---------------------
....................TGGATTCAGACTATGAAAGATTAGAGCACGGA......................................................................................................................................................................................................321.000.00----------1.00----------------------------------
............................................................................................................................................................TTTAACTCTGAACTATGAATGTAGA.....................................................................2511.001.00-------------1.00-------------------------------
...................................AAAGATTAGAGCACGGAA.....................................................................................................................................................................................................181.000.00---------------1.00-----------------------------
..................................................................................................................................CCCAAGACTGACAAGACGC.....................................................................................................191.000.00-----------------------------------------1.00---
...............TCTCCTGGATTCAGACTATGAAAGATTAGAGC...........................................................................................................................................................................................................3211.001.00---------------------------1.00-----------------
....................TGGATTCAGACTATGAA.....................................................................................................................................................................................................................1720.500.50--------------------------------------------0.50
.....................GGATTCAGACTATGAA.....................................................................................................................................................................................................................1630.330.33--------------------0.33------------------------

Antisense strand
TCGCTTTAAAACATTTCTCCTGGATTCAGACTATGAAAGATTAGAGCACGGTATGTGTCTGTATGCCCTTGTTTCATCTTTTTTGTTAGTTCTGCATGTTTTTAATGAAAATTCTAATAATGTAACTATCCCCAAGACTGACAAGCTGAGTTAAGGTTTAACTCTGAACTATGAATGTAGAGGAGTGGATAAGTGGCCAAATTCTGAAATTACGTGCCACGTTAGCTCTTAGCAGGTGGTCATTCCTATA
...................................................................................................................................................((((((.....))))))......................................................................................
................................................................................................................113.............................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
........................................................GTCTGTATGCCCTTGT.................................................................................................................................................................................. 162.000.00-2.00-------------------------------------------
.......................................................TGTCTGTATGCCCTTAAA................................................................................................................................................................................. 181.000.00--------------------------------------1.00------