ID: uc001mcy.1_intron_1_0_chr11_6417193_r
GENE: APBB1(1)
chr11:6417143-6417379-


(1)
AGO2.ip 		(1)
B-CELL 		(8)
BRAIN 		(3)
BREAST 		(3)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(1)
KIDNEY 		(2)
OTHER 		(6)
SKIN

Sense strand
CAAGTCATGTCAGTGTGGCCCCTGCTACCCTCACCATCTTGCACCAGCAGGTAAAGAGCTGGGGTAGAAGTCGTGGCTGCGCCTTGCCATAGAGGGGAGACTGGGGGTGAGGGGAAGAGCTGCTAAGATGGATGTGGAACACAGTGTGGGGTTGGTGTTCCTTTTTAACTGAGTTCCCTCCATGCAGACAGAGGCAGTGCTGGGAGAGTGTCGGGTGCGTTTCCTCTCCTTCCTGGC
.....................................................................(((.((((.((.(((..((......((....))...))..)))......)).)))).)))...((((...))))..............................................................................................
.............................................................62.......................................................................................151....................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR343334SRR040034(GSM532919)
G001N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
.............................................................................................................................AGATGGATGTGGAACACAGTGT..........................................................................................22113.0013.006.007.00------------------------------
.............................................................................................................................AGATGGATGTGGAACACAGTGTGG........................................................................................24111.0011.002.001.002.00-2.001.00--1.00-------------1.00------1.00--
.............................................................................................................................AGATGGATGTGGAACACAGTGTGA........................................................................................2415.004.001.002.00------------------1.00--1.00--------
.............................................................................................................................AGATGGATGTGGAACACAGTGTG.........................................................................................2314.004.002.00------------1.00-----1.00------------
............................................................................................................................AAGATGGATGTGGAACACAGTG...........................................................................................2213.003.003.00-------------------------------
.............................................................................................................................AGATGGATGTGGAACACAGTGTGGT.......................................................................................2512.0011.00------1.00----1.00--------------------
.............................................................................................................................AGATGGATGTGGAACACAGTGTGT........................................................................................2412.004.00---2.00----------------------------
............................................................................................................................AAGATGGATGTGGAACACAGTGT..........................................................................................2312.002.002.00-------------------------------
............................................................................................................................AAGATGGATGTGGAACACAGT............................................................................................2111.001.00--------------1.00-----------------
.............................................................................................................................................................TTCCTTTTTAACTGAGTTCCCTCCATGCAG..................................................3011.001.00-------1.00------------------------
..................................................................GAAGTCGTGGCTGCGGG..........................................................................................................................................................171.000.00----------------------------1.00---
.................................................................................................................................................................TTTTTAACTGAGTTCCCTCCATGCAG..................................................2611.001.00-------------------------1.00------
..................................................................GAAGTCGTGGCTGCGCGG.........................................................................................................................................................181.000.00--------------------------1.00-----
............................................................................................................................AAGATGGATGTGGAACAAA..............................................................................................191.000.00-1.00------------------------------
....................................................................................................................................................................................................GTGCTGGGAGAGTGTCGGGT.....................2011.001.001.00-------------------------------
.............................................................................................................................AGATGGATGTGGAACACAGTGTT.........................................................................................2311.0013.00-1.00------------------------------
.................................................GGTAAAGAGCTGGGGTAGAAGTCG....................................................................................................................................................................2411.001.00------1.00-------------------------
...........................................................................................GAGGGGAGACTGGGGGATGG..............................................................................................................................201.000.00----------1.00---------------------
.............................................................................................................................AGATGGATGTGGAACACAGT............................................................................................2011.001.001.00-------------------------------
................................ACCATCTTGCACCAGCAG...........................................................................................................................................................................................1811.001.00-------1.00------------------------
..................................................................................................................................................................................................CAGTGCTGGGAGAGTGTCGGG......................2111.001.00--1.00-----------------------------
.......................................................................................................................................................................................................................TGCGTTTCCTCTCCTTCCTGGC2211.001.00------------------1.00-------------
..........................................................................................................................................................GTGTTCCTTTTTAACTGAGTTCCCTCCATGCAG..................................................3311.001.00----------------1.00---------------
.............................................................................................................................AGATGGATGTGGAACACAGTGGGG........................................................................................241.000.00---------------------------1.00----
............................................................................................................................................................................................CAGAGGCAGTGCTGGGAGA..............................1911.001.00------------1.00-------------------
............................................................................................................................AAGATGGATGTGGAACACAGTGTG.........................................................................................2411.001.001.00-------------------------------
.............................................................................................................................AGATGGATGTGGAAC.................................................................................................1590.110.11-------------------------------0.11

Antisense strand
CAAGTCATGTCAGTGTGGCCCCTGCTACCCTCACCATCTTGCACCAGCAGGTAAAGAGCTGGGGTAGAAGTCGTGGCTGCGCCTTGCCATAGAGGGGAGACTGGGGGTGAGGGGAAGAGCTGCTAAGATGGATGTGGAACACAGTGTGGGGTTGGTGTTCCTTTTTAACTGAGTTCCCTCCATGCAGACAGAGGCAGTGCTGGGAGAGTGTCGGGTGCGTTTCCTCTCCTTCCTGGC
.....................................................................(((.((((.((.(((..((......((....))...))..)))......)).)))).)))...((((...))))..............................................................................................
.............................................................62.......................................................................................151....................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR343334SRR040034(GSM532919)
G001N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577745(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
.....................................................................................................................AGCTGCTAAGATGGATTCT..................................................................................................... 192.000.00---------1.00-----------1.00----------
..............................................................................................................................................................................................................................CCTCTCCTTCCTGGCCGTG 191.000.00------------------------1.00-------
...................................................................................................................................................GGGGTTGGTGTTCCTCTG........................................................................ 181.000.00-----------------1.00--------------
..............................................................................CCCTCTATGGCAAGGCGC............................................................................................................................................. 1811.001.00-----1.00--------------------------
..........................GTGCAAGATGGTGAGGGT................................................................................................................................................................................................. 1811.001.00---------------1.00----------------
............................................................................ACCCCCAGTCTCCCCTCTATGGCAAGGCGCAG................................................................................................................................. 3211.001.001.00-------------------------------
..................................................................................................................CATCTTAGCAGCTCTT........................................................................................................... 1630.330.33--------0.33-----------------------
...............................................................................................................CTTAGCAGCTCTTCCC.............................................................................................................. 1650.200.20------------------------------0.20-