ID: uc001lxt.2_intron_1_0_chr11_3382019_r.5p
GENE: (4)
chr11:3382773-3383022-


(1)
BRAIN
(6)
CELL-LINE
(1)
HEART
(1)
OTHER
(4)
SKIN

Sense strand
GAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGGTAATCTCCTAAGAGCATGTACCTTGCTTTTCACTTGCTGCTTTCAGGATTCTTTTCTCCTTTGACTTTGGAAACTGTGGTTATAATGTGTCTTATGTCCCTTTTTGTTTATACTAGTTGATGTGTTGAGCTTCTTGATTTTTTTGTATTTTTTTCTTACTTTTGAGAATTTCTCAGTAATTATTTCCTTTCATACCTCA
...........................................................................((((..(((..((((.....((((........))))..(((...(((.((............)).)))...)))...............))))....)))..)))).....................................................................
........................................................................73.............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343335SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................TTTTCACTTGCTGCTTCTAT.........................................................................................................................................................2010.000.007.00--2.00---------1.00----
.............................................................................TTTTCACTTGCTGCTTCT...........................................................................................................................................................187.000.006.00--1.00--------------
..............................................................................TTTCACTTGCTGCTTCTAT.........................................................................................................................................................197.000.007.00-----------------
............................................................................................................................................................................................TTTTTTTGTATTTTTTTCTTACTTTTGAG.................................2914.004.00-4.00----------------
.............................................................................TTTTCACTTGCTGCTCCT...........................................................................................................................................................184.000.004.00-----------------
..................................................................................................................................................................................AGCTTCTTGATTTTTTTGTATTTTTTTCTT..........................................3013.003.00-1.002.00---------------
.............................................................................TTTTCACTTGCTGCTTCCAT.........................................................................................................................................................203.000.001.00----1.00---------1.00--
..............................................................................TTTCACTTGCTGCTTCT...........................................................................................................................................................173.000.002.00--1.00--------------
..........................................................................................................................................................................ATGTGTTGAGCTTCTTGATTTTT.........................................................2312.002.00--2.00---------------
....................................................................................................................................................................................CTTCTTGATTTTTTTGTATTTTTTTCTT..........................................2812.002.00-2.00----------------
...............................................................................................................................................................................TTGAGCTTCTTGATTTCT.........................................................182.000.00-2.00----------------
..............................................................................................................................................................................GTTGAGCTTCTTGATTTTT.........................................................1912.002.00----2.00-------------
..................................................................................................................................................................................AGCTTCTTGATTTTTTTGTATTTTTTTCTC..........................................302.000.00-1.001.00---------------
..................................................................................................................................................................................................................................GTAATTATTTCCTTTCATACCTCA2411.001.00----------1.00-------
.....................................................................................................................TTGGAAACTGTGGTTATAAT.................................................................................................................2011.001.00--------------1.00---
................................................................................................................................................................................TGAGCTTCTTGATTTTT.........................................................1721.001.00-0.50--0.50-------------
.............................................................................TTTTCACTTGCTGCTTCTA..........................................................................................................................................................191.000.001.00-----------------
...........................................................................................................................................................................................ATTTTTTTGTATTTTTTTCTTACTTTCGAG.................................301.000.00--1.00---------------
.........................................................................................................................AAACTGTGGTTATAATGTGTC............................................................................................................2111.001.00--------1.00---------
...........................................................................................................................................................................TGTGTTGAGCTTCTTGATTTCT.........................................................221.000.00--1.00---------------
................................................................................................................................................................................TGAGCTTCTTGATTTTTTTGTATTTTTTCT............................................301.000.00--1.00---------------
..................................................................................................................................................................................AGCTTCTTGATTTTTTTGTATTTTTTCCT...........................................291.000.00--1.00---------------
.....................................................................................................................................................................................................ATTTTTTTCTTACTTTTGAGCTTT.............................241.000.00--1.00---------------
..................................................................................................................................................................................AGCTTCTTGATTTTTTTGTATTCTTT..............................................261.000.00-1.00----------------
...............................................................................................................................................................................TTGAGCTTCTTGATTTTT.........................................................1821.001.00-0.500.50---------------
................................................................................................................................................................................TGAGCTTCTTGATTTTTTTGTATTTTTTTC............................................3011.001.00--1.00---------------
.....................................................................................................................................................................................................ATTTTTTTCTTACTTTCCAG.................................201.000.00-----------------1.00
.............................................................................................................................................................................TGTTGAGCTTCTTGATTTTT.........................................................2011.001.00-1.00----------------
....................................................................................................................................................................................CTTCTTGATTTTTTTGTATTTTTTTCTCAC........................................301.000.00-1.00----------------
...............................................................................................................................................................................TTGAGCTTCTTGATTCTT.........................................................181.000.00-1.00----------------
...................................................................................................................................................................................................................TTTGAGAATTTCTCAATCG....................191.000.00-----1.00------------
.............................................................................TTTTCACTTGCTGCTTCTAC.........................................................................................................................................................201.000.001.00-----------------
..................................................................................................ATTCTTTTCTCCTTTGCCCC....................................................................................................................................201.000.00--1.00---------------
....................................................................................................................................................................................CTTCTTGATTTTTTTGTATTTTTTTCC...........................................271.000.00--1.00---------------
...............................................................................................................................................................................TTGAGCTTCTTGATTTTTTTGTATTTTTTTC............................................3111.001.00--1.00---------------
.......................TCAATGTTTCTGTGGAC..................................................................................................................................................................................................................1711.001.00------1.00-----------
..................................................................................................................................................................................AGCTTCTTGATTTTTTTGTATTTTTCTC............................................281.000.00-1.00----------------
........................CAATGTTTCTGTGGAC..................................................................................................................................................................................................................1620.500.50------0.50-----------
............................................................................CTTTTCACTTGCTGCTTTCA..........................................................................................................................................................2040.250.250.25-----------------

Antisense strand
GAACCACCGTGCCCAGCCAGGCCTCAATGTTTCTGTGGACAAATTCACTGGTAATCTCCTAAGAGCATGTACCTTGCTTTTCACTTGCTGCTTTCAGGATTCTTTTCTCCTTTGACTTTGGAAACTGTGGTTATAATGTGTCTTATGTCCCTTTTTGTTTATACTAGTTGATGTGTTGAGCTTCTTGATTTTTTTGTATTTTTTTCTTACTTTTGAGAATTTCTCAGTAATTATTTCCTTTCATACCTCA
...........................................................................((((..(((..((((.....((((........))))..(((...(((.((............)).)))...)))...............))))....)))..)))).....................................................................
........................................................................73.............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343335SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
........................................................................................................................................................................................TTGATTTTTTTGTATTTTAT.............................................. 201.000.00----1.00-------------
..............................TTCTGTGGACAAATTCC........................................................................................................................................................................................................... 171.000.00---------1.00--------
.......................................................................CCTTGCTTTTCACTTGAGGT............................................................................................................................................................... 201.000.00----------------1.00-
.....................................GACAAATTCACTGGTGAT................................................................................................................................................................................................... 181.000.00------------1.00-----
..............................TTCTGTGGACAAATTCCC.......................................................................................................................................................................................................... 181.000.00-------1.00----------
..............................................................................TTTCACTTGCTGCTTGTGG......................................................................................................................................................... 191.000.00-----------1.00------
............................................................................................................................................AAAAAGGGACATAAGA.............................................................................................. 1690.220.22-------0.22----------