ID: uc001lhj.2_intron_8_0_chr10_125526669_r.5p
GENE: (11)
chr10:125527783-125528032-


(1)
B-CELL 		(2)
BREAST 		(19)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(1)
OTHER 		(3)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
CTGGCCCATCTCACCCAATAGGACATGGGCAGCGAGGCCCCAGCTCCAGAGTATGTCTGGCCCTAGGGCTATGCAAAATTCCACCTTCCGAGCTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTGAGTCGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTACAGTGGCGTGATCTCCGCTCACTGCAACCTCTGCCTCCTGGATTCAAGCGATTTGCCTCAGCCTCCTAAGT
.......................................................................................((((.(((........((..((..((..((......))..))..))..))......))))))).(((..((.(((.(((((.....)).)))))).))...)))...........................................................
.......................................................................................88.....................................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR343336SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532929(GSM532929)
G702N. (cervix)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR189785SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335TAX577745(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
............................................................................................CTTTATTTATTTATTTATTTATTTATTTCG................................................................................................................................3060.000.0012.006.0032.00-10.00----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTACAAG.............................................................................................................................3340.000.0011.0011.0010.00-8.00----------------------------
...........................................................................................................TATTTATTTATTTATTTATTTATTTATTTATCAG.............................................................................................................3416.000.008.004.004.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTCTAG..............................................................................................................................3215.000.008.007.00-------------------------------
....................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCAG.....................................................................................................................3312.000.004.00---4.00-4.00--------------------------
................................................................................................................ATTTATTTATTTATTTATTTATCATG................................................................................................................2612.000.006.006.00-------------------------------
.............................................................................................................TTTATTTATTTATTTATTTATTTATTTATCTCG............................................................................................................3310.000.0010.00--------------------------------
.............................................................................................................TTTATTTATTTATTTATTTATTTATTTATCCG.............................................................................................................3210.000.00--10.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTACAAG.....................................................................................................................................257.000.002.004.001.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTCTAG..................................................................................................................................286.000.002.003.00--1.00----------------------------
.............................................................................................................TTTATTTATTTATTTATTTATTTATCTGC................................................................................................................296.000.00---6.00-----------------------------
......................................................................................................................TTATTTATTTATTTATTTATTTTTTCCTA.......................................................................................................296.000.00--6.00------------------------------
..........................................................................................................TTATTTATTTATTTATTTATTTATCATG....................................................................................................................286.000.006.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATCTTG................................................................................................................................306.000.002.004.00-------------------------------
..........................................................................................................TTATTTATTTATTTATTTATTTATCTCG....................................................................................................................286.000.006.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTCTTG..............................................................................................................................326.000.003.002.001.00------------------------------
....................................................................................................ATTTATTTATTTATTTATTTATTTATCTCG........................................................................................................................305.000.00----5.00----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATTCTG............................................................................................................................345.000.003.002.00-------------------------------
...................................................................................................TATTTATTTATTTATTTATTTATTTATCTGC........................................................................................................................315.000.00---5.00-----------------------------
....................................................................................................ATTTATTTATTTATTTATTTATTTATCTGC........................................................................................................................305.000.00-----5.00---------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATTTACG...........................................................................................................................355.000.004.00---1.00----------------------------
............................................................................................................ATTTATTTATTTATTTATTTATTTATCGGT................................................................................................................305.000.00---5.00-----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTCTG................................................................................................................................304.000.002.002.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATCTTG............................................................................................................................344.000.003.001.00-------------------------------
........................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCCTG................................................................................................................344.000.004.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATTCTTG...........................................................................................................................354.000.003.001.00-------------------------------
............................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCCG.............................................................................................................334.000.00--4.00------------------------------
....................................................................................................ATTTATTTATTTATTTATTTATTTATTTATCCC.....................................................................................................................334.000.004.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTACTG..............................................................................................................................324.000.002.002.00-------------------------------
....................................................................................................................ATTTATTTATTTATTTATTTATTTTTCCAG........................................................................................................304.000.003.001.00-------------------------------
..........................................................................................................TTATTTATTTATTTATTTATTTATTTATTTATCAG.............................................................................................................354.000.004.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTAACAG.............................................................................................................................333.000.00-1.002.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATAATA............................................................................................................................343.000.001.00-1.00-1.00----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATCTCG................................................................................................................................303.000.001.002.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTAATG..................................................................................................................................283.000.001.00-2.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATTCATT...........................................................................................................................353.000.001.002.00-------------------------------
............................................................................................CTTTATTTATTTATTTCTTG..........................................................................................................................................203.000.001.002.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTACG...............................................................................................................................313.000.001.002.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTCATG.......................................................................................................................................233.000.00-3.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTCTAG...................................................................................................................................272.000.00-2.00-------------------------------
....................................................................................................................ATTTATTTATTTATTTATTTATTTTTCACG........................................................................................................302.000.002.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTCAAG..............................................................................................................................322.000.00--2.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTCCG...................................................................................................................................272.000.002.00--------------------------------
..................................................................................................................................................................TTGCCCAGGCTGGAGTACAGTGCAC...............................................................252.000.00---2.00-----------------------------
..................................................................................................................TTATTTATTTATTTATTTATTTATTTTTTCCTA.......................................................................................................332.000.00--1.00-1.00----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTCTTG...............................................................................................................................312.000.001.001.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTACTTG.................................................................................................................................292.000.00-2.00-------------------------------
.....................................................................................................................TTTATTTATTTATTTATTTATTTTTTCTAG.......................................................................................................302.000.001.001.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTCATG...............................................................................................................................312.000.002.00--------------------------------
..........................................................................................................................................TTTTTGAGTCGGAGTCTGGA............................................................................................202.000.00---2.00-----------------------------
...............................................................................................................................................................CTGTTGCCCAGGCTGGAGTACTCTG..................................................................252.000.00---------2.00-----------------------
...................................................................................................................TATTTATTTATTTATTTATTTATTTTTCCAG........................................................................................................312.000.001.001.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATCTAG............................................................................................................................342.000.001.001.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTCATG...................................................................................................................................272.000.00-2.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTCAG................................................................................................................................302.000.001.001.00-------------------------------
.............................................................................................................................................................................................ATCTCCGCTCACTGCAACCTCTGCCTCGGGT..............................312.000.00-----2.00---------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATTCATG...........................................................................................................................352.000.001.001.00-------------------------------
...........................................................................................GCTTTATTTATTTATTTATTTATTTATTTTTCG..............................................................................................................................332.000.00--2.00------------------------------
........................................................................................................................................................................................................................CTGGATTCAAGCGATTTG................1821.501.50----------------1.50----------------
............................................................................................CTTTATTTATTTATTTATTTATTTATATTG................................................................................................................................301.000.00-1.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATAATA....................................................................................................................................261.000.00--1.00------------------------------
................................................................................................................ATTTATTTATTTATTTATTTATTTATTTTTCATG........................................................................................................341.000.001.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATCAAG....................................................................................................................................261.000.00----1.00----------------------------
.........................................................................................................................................................................................................................TGGATTCAAGCGATTG.................161.000.00----------------------1.00----------
............................................................................................CTTTATTTATTTATTTATTTATTTATTCAAG...............................................................................................................................311.000.001.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTAACTG.................................................................................................................................291.000.00-1.00-------------------------------
.............................................................................................................................................................................................ATCTCCGCTCACTGCAACCTCTGCCTCCGCG..............................311.000.00---1.00-----------------------------
..........................................................................................AGCTTTATTTATTTATTTATTTATTTATCTTG................................................................................................................................321.000.00------1.00--------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTACA...............................................................................................................................311.000.00----1.00----------------------------
............................................................................................CTTTATTTATTTATTTATTTACG.......................................................................................................................................231.000.001.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATCTAG....................................................................................................................................261.000.001.00--------------------------------
...................................................................................................................TATTTATTTATTTATTTATTTATTTTTTGGGAA......................................................................................................331.000.00----1.00----------------------------
..................................................................................................................TTATTTATTTATTTATTTATTTATTTTTTCAAT.......................................................................................................331.000.001.00--------------------------------
........................................................................................................................................................................AGGCTGGAGTACAGTGGCGTGATAAAC.......................................................271.000.00--------------------------1.00------
............................................................................................CTTTATTTATTTATTTATTTATTCCG....................................................................................................................................261.000.001.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTCCCG...............................................................................................................................311.000.00-1.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTCACG...............................................................................................................................311.000.00-1.00-------------------------------
........................................................................................................................................................................................................................CTGGATTCAAGCGATTAA................181.000.00-------------1.00-------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTACTTG.............................................................................................................................331.000.00-1.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATTTCAG...........................................................................................................................351.000.00-1.00-------------------------------
......................................................................................................................................................AGTCTCCCTCTGTTGCCCAGGAGTG...........................................................................251.000.00---1.00-----------------------------
............................................................................................CTTTATTTATTTATTTATTTACAG......................................................................................................................................241.000.001.00--------------------------------
.................................................................................................................TTTATTTATTTATTTATTTATTTATTTTTTATAT.......................................................................................................341.000.00--1.00------------------------------
..................................................................................................................................TTATTTATTTTTTGAGTCGGGGTC................................................................................................241.000.00---1.00-----------------------------
.......................................................................................................................................................................CAGGCTGGAGTACAGTGGCGTGACTAC........................................................271.000.00-----1.00---------------------------
............................................................................................CTTTATTTATTTATTTATTTACTAT.....................................................................................................................................251.000.00----1.00----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTCTTA..................................................................................................................................281.000.00----1.00----------------------------
............................................................................................CTTTATTTATTTATTTATTTATCG......................................................................................................................................241.000.00--1.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATATCG....................................................................................................................................261.000.001.00--------------------------------
...................................................................................................................................................................TGCCCAGGCTGGAGTACAGGCG.................................................................221.000.00---1.00-----------------------------
............................................................................................CTTTATTTATTTATTTATTCGAG.......................................................................................................................................231.000.00---1.00-----------------------------
...................................................................................................................................................................TGCCCAGGCTGGAGTACAGTGGCG...............................................................2401.001.00------------------1.00--------------
.....................................................................................................................TTTATTTATTTATTTATTTATTTTTTGCATC......................................................................................................311.000.00-----1.00---------------------------
............................................................................................CTTTATTTATTTATTTATTTATTCTTG...................................................................................................................................271.000.001.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTACTAT.............................................................................................................................331.000.00--1.00------------------------------
....................................................................................................................ATTTATTTATTTATTTATTTATTTTTTCGCC.......................................................................................................311.000.00---1.00-----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTAG.................................................................................................................................291.000.001.00--------------------------------
.............................................................................................................................................................................................ATCTCCGCTCACTGCAACCTCTGCCTCTGGG..............................311.000.00-----1.00---------------------------
........................................................................................................................................................................AGGCTGGAGTACAGTGGCGTGATCCCCG......................................................281.000.00------1.00--------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTCCG................................................................................................................................301.000.001.00--------------------------------
...........................................................................AAATTCCACCTTCCGACTA............................................................................................................................................................191.000.00-------------------------------1.00-
....................................................................................................................ATTTATTTATTTATTTATTTATTTTTCATG........................................................................................................301.000.00-1.00-------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTATAG...............................................................................................................................311.000.00--1.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATTTCT............................................................................................................................341.000.00--1.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTAGG...............................................................................................................................311.000.00----1.00----------------------------
.............................................................................................................................................................................................ATCTCCGCTCACTGCAACCTCTGCCCAC.................................281.000.00---1.00-----------------------------
.............................................................................................................................................................................................ATCTCCGCTCACTGCAACCTCTGCCAGG.................................281.000.00---1.00-----------------------------
.............................................................................................................................................................................................ATCTCCGCTCACTGCAACCTCTGCCTCCGGGT.............................321.000.00-----1.00---------------------------
...........................................................................................GCTTTATTTATTTATTTATTTATTTATTTATCTAG............................................................................................................................351.000.001.00--------------------------------
..........................................................................................AGCTTTATTTATTTATTTATTTATCTT.....................................................................................................................................271.000.00------1.00--------------------------
...........................................................................................GCTTTATTTATTTATTTATTTATTTATTTTAG...............................................................................................................................321.000.00-1.00-------------------------------
.............................................................................................................................................TTGAGTCGGAGTCTCCCTCTGCC......................................................................................231.000.00-----1.00---------------------------
...................................................................................................................TATTTATTTATTTATTTATTTATTTTTTCCTA.......................................................................................................321.000.00----1.00----------------------------
...........................................................................................................................................................CCCTCTGTTGCCCAGGCTGGAGTACAGTGGCCC..............................................................331.000.00---------1.00-----------------------
.................................................................................................................TTTATTTATTTATTTATTTATTTATTTTTTAACT.......................................................................................................341.000.001.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATTGATG...........................................................................................................................351.000.00--1.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTCTCG...............................................................................................................................311.000.00-1.00-------------------------------
.............................................................................................................................................................................................ATCTCCGCTCACTGCAACCTCTGCCCCAG................................291.000.00---1.00-----------------------------
..................................................................................................................................................................TTGCCCAGGCTGGAGTACAGTGCGTG..............................................................261.000.00---1.00-----------------------------
........................................................................................................................ATTTATTTATTTATTTATTTTTTCCGC.......................................................................................................271.000.00---1.00-----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTCCG...............................................................................................................................311.000.001.00--------------------------------
................................................................................................................ATTTATTTATTTATTTATTTATTTATTTTTCCAG........................................................................................................341.000.001.00--------------------------------
.....................................................................................................................TTTATTTATTTATTTATTTATTTTTTCCAG.......................................................................................................301.000.00----1.00----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATATG.................................................................................................................................291.000.00----1.00----------------------------
................................................................................................................................................................................................TCCGCTCACTGCAACCTGGC......................................201.000.00---1.00-----------------------------
.......................................CCAGCTCCAGAGTATGTC.................................................................................................................................................................................................1811.001.00-----------------1.00---------------
............................................................................................CTTTATTTATTTATTTATTTATAAG.....................................................................................................................................251.000.001.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATCATA................................................................................................................................301.000.00--1.00------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTACTAG.................................................................................................................................291.000.001.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTCCAG..............................................................................................................................321.000.001.00--------------------------------
...................................................................................................................TATTTATTTATTTATTTATTTATTTTTTCCAG.......................................................................................................321.000.00----1.00----------------------------
....................................................................................................................ATTTATTTATTTATTTATTTATTTTTTCCG........................................................................................................301.000.001.00--------------------------------
......................................................................................................................TTATTTATTTATTTATTTATTTTTTCTCG.......................................................................................................291.000.001.00--------------------------------
..............................................................................................................................TTATTTATTTATTTTTTGAGTCCTGC..................................................................................................261.000.00---1.00-----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATTTAACA..........................................................................................................................361.000.00--1.00------------------------------
................................................................................................................................................................TGTTGCCCAGGCTGGAGTACAGTGCGTG..............................................................281.000.00---1.00-----------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTACG................................................................................................................................301.000.00----1.00----------------------------
.............................................................................................................................................................................................ATCTCCGCTCACTGCAACCTCTGCCTGGGC...............................301.000.00---1.00-----------------------------
............................................................................................CTTTATTTATTTATTTATTTACTTG.....................................................................................................................................251.000.00-1.00-------------------------------
..................................................................................................................................................................TTGCCCAGGCTGGAGTACAGTGCGT...............................................................251.000.00---1.00-----------------------------
............................................................................................CTTTATTTATTTATTTATTCTAG.......................................................................................................................................231.000.00-1.00-------------------------------
...........................................................................................GCTTTATTTATTTATTTATTTATTTCTAG..................................................................................................................................291.000.00------1.00--------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTTATAAG.............................................................................................................................331.000.00----1.00----------------------------
..............................................................................................................................................................................................TCTCCGCTCACTGCAACCGGC.......................................211.000.00---1.00-----------------------------
............................................................................................................................................................................TGGAGTACAGTGGCGTGATCTGTCG.....................................................251.000.00--------------------1.00------------
............................................................................................CTTTATTTATTTATTTATTTATTCTG....................................................................................................................................261.000.001.00--------------------------------
............................................................................................CTTTATTTATTTATTTATTTATTTATTATTG...............................................................................................................................311.000.00----1.00----------------------------
..............................................................................................................................................................TCTGTTGCCCAGGCTGGAGTACTCTG..................................................................261.000.00-------------------1.00-------------
............................................................................................CTTTATTTATTTATTTATTTATTTCAAG..................................................................................................................................281.000.00-1.00-------------------------------
.............................................................................................................................................................................................................ACCTCTGCCTCCTGGATTCGGGC......................231.000.00---------------------1.00-----------
................................................................................................................................ATTTATTTATTTTTTGAGTCGGAGTC................................................................................................2630.330.33-----0.33---------------------------
............................................................................................................................ATTTATTTATTTATTTTTTGAGTCG.....................................................................................................2590.110.11---0.11-----------------------------

Antisense strand
CTGGCCCATCTCACCCAATAGGACATGGGCAGCGAGGCCCCAGCTCCAGAGTATGTCTGGCCCTAGGGCTATGCAAAATTCCACCTTCCGAGCTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTGAGTCGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTACAGTGGCGTGATCTCCGCTCACTGCAACCTCTGCCTCCTGGATTCAAGCGATTTGCCTCAGCCTCCTAAGT
.......................................................................................((((.(((........((..((..((..((......))..))..))..))......))))))).(((..((.(((.(((((.....)).)))))).))...)))...........................................................
.......................................................................................88.....................................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR343336SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532929(GSM532929)
G702N. (cervix)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR189785SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335TAX577745(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................................................................................................................................................................................................CTCCTGGATTCAAGCAGGT.................. 196.000.00-------4.00----2.00--------------------
.............................................................................................................................................................................................................ACCTCTGCCTCCTGGATTCAAGATC.................... 254.000.00--------4.00------------------------
.........................................................................................................................................................................GGCTGGAGTACAGTGGCGTGGGC.......................................................... 233.000.00---3.00-----------------------------
.........................................................................................................................................................................GGCTGGAGTACAGTGGCGTGATCTGGGC..................................................... 282.000.00---2.00-----------------------------
.........................................................................................................................................................................GGCTGGAGTACAGTGGCGTGATGAG........................................................ 252.000.00---2.00-----------------------------
.........................................................................................................................................................................GGCTGGAGTACAGTGGCGTGATGGGC....................................................... 262.000.00---2.00-----------------------------
...........................................................................................................................................................................CTGGAGTACAGTGGCGTGATCTAATG..................................................... 261.000.00---1.00-----------------------------
............................................................................................................................................................................................................AATCCAGGAGGCAGAGGTT........................... 1901.001.00---------------1.00-----------------
...................................................................................................................................................CGGAGTCTCCCTCTGTTGCCCAGGCTCG........................................................................... 281.000.00---1.00-----------------------------
...................................................................................................................................................................................................................GCCTCCTGGATTCAAGCCAGG.................. 211.000.00--------------1.00------------------
....................................................................CTATGCAAAATTCCACAG.................................................................................................................................................................... 181.000.00--------------1.00------------------
...................................................................................................................................................CGGAGTCTCCCTCTGTTGCCC.................................................................................. 211.000.00-----1.00---------------------------
.....................................................................................................................................................................................................................CTCCTGGATTCAAGCGAGGT................. 201.000.00-------------------------1.00-------
.........................................................................................................................................................................................................TGCAACCTCTGCCTCCTGGATTCAAGA...................... 271.000.00--------------------------------1.00
...........................................................................................................................................................................................TGATCTCCGCTCACTGCAACCTGAGA..................................... 261.000.00-------------1.00-------------------
.........................................................................................................................................................................GGCTGGAGTACAGTGGCGTGATGGCC....................................................... 261.000.00---1.00-----------------------------
.........................................................................................................................................................................................................TGCAACCTCTGCCTCCTGGATAGAC........................ 251.000.00----------1.00----------------------
......................................................................................................................................................................................................................................TTTGCCTCAGCCTCCTGAGT 201.000.00----------------------------1.00----
.................................................................................................................................................................................................CCGCTCACTGCAACCTCTGCCTCGAG............................... 261.000.00-----1.00---------------------------
...................................................................................................................................................................................................................................CGATTTGCCTCAGCCTGTCG... 201.000.00------------------------1.00--------
.........................................................................................................................................................................................................GAATCCAGGAGGCAGAGGTTGCA.......................... 2301.001.00---------------------------1.00-----
.....................................................................................................................................................................................................................CTCCTGGATTCAAGCGAGTT................. 201.000.00----1.00----------------------------
.................................................................................................................................................................GTTGCCCAGGCTGGAGTACAGTGGCGTGATGGG........................................................ 331.000.00---1.00-----------------------------
.................................................................................................................................................................................................CCGCTCACTGCAACCTCTGCCTGCT................................ 251.000.00----------1.00----------------------
..........................................................................................................................................................................................................GCAACCTCTGCCTCCTGGATTGAG........................ 241.000.00---1.00-----------------------------
.........................................................................................................................................................................................................AATCCAGGAGGCAGAGGTTGCA........................... 2201.001.00---------------1.00-----------------
.....................................................................................................................................................................................................................ATCGCTTGAATCCAGGAG................... 1801.001.00-----------1.00---------------------
.......................................................................................................................................................................................................ACTGCAACCTCTGCCTCCTGTTT............................ 231.000.00-----------------------1.00---------
..........................................................................................................................................................................................................GCAACCTCTGCCTCCTGGATGAGC........................ 241.000.00---1.00-----------------------------
.........................................................................................................................................................................GGCTGGAGTACAGTGGCGTGATCGTG....................................................... 261.000.00---1.00-----------------------------
................................................................................................................................................................................................................TCTGCCTCCTGGATTCAAGTA..................... 211.000.00-----------------------------1.00---
....................................................................................CTTCCGAGCTTTATTTCT.................................................................................................................................................... 181.000.00------------------------------1.00--
...............................................................................................................................................................................................................TGAATCCAGGAGGCAGAG......................... 1801.001.00-----------1.00---------------------
.........................................................................................................................................................................GGCTGGAGTACAGTGGCGTGAGGGC........................................................ 251.000.00---1.00-----------------------------