ID: uc001lfs.2_intron_9_0_chr10_123733597_r.5p
GENE: (1)
chr10:123734189-123734438-


(1)
AGO2.ip
(16)
B-CELL
(1)
BRAIN
(14)
BREAST
(30)
CELL-LINE
(6)
CERVIX
(2)
FIBROBLAST
(2)
HEART
(3)
HELA
(7)
LIVER
(2)
OTHER
(1)
RRP40.ip
(26)
SKIN
(1)
TESTES
(3)
UTERUS
(2)
XRN.ip

Sense strand
GTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCCGTCCAACGTAAGGCGGCGCCTCCGGGCGGCGCGGGCCCGGACGGGCCGCTGTCCCCGCCCTGCGCCGGGCGCGGGGGGAGGGCACCGGAGGCAGGTGCCGGGCGGAGGCCCGGCGCGGCGTTAGTAGAGACGCGCCGGGTGCCAGCCCCTCGCCGCACCTTAAATTGTTGACAAAGTGCTCCCACTTTGTGGCTGGAGCCGTACGAC
.....................................................................((((((((((..((((((....))))))..)))).)))))).((((((((((..((((((...(((..(((((((((....))))))))).(((((......)))))))).))))))..)))))))).))...................................................
..................................................................67...................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577453(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040007(GSM532892)
G601T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR191469(GSM715579)
117genomic small RNA (size selected RNA from . (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782TAX577740(Rovira)
total RNA. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029127(GSM416756)
A549. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
...............................................................................................................................................................................CGCCGGGTGCCAGCCCCTCGC......................................................2115.005.00-2.00-----------------------------------------------------1.00------1.00--------------------------1.00--------------------------
.......................................................................GCGCGGGCCCGGACGCGCG................................................................................................................................................................192.000.00---2.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................AAAGTGCTCCCACTTTGTGTGC.............222.000.00---------------------------------------1.00-----------------------------------------1.00----------------------------------
..........................................................................................................GCCGGGCGCGGGGGGGA...............................................................................................................................172.000.00---2.00----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GGGCGGAGGCCCGGCGCGGCGTTAGTAGAGACG...........................................................................3312.002.00----------------------------2.00---------------------------------------------------------------------------------------
.........................................................................................................................................................CGGCGCGGCGTTAGTAG................................................................................1712.002.00-2.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................ACCTTAAATTGTTGACAGAG...............................201.000.001.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................AGGCAGGTGCCGGGCGGAG....................................................................................................1911.001.00---------------------------------------------1.00----------------------------------------------------------------------
..............................................................................................TCCCCGCCCTGCGCCCTCT.........................................................................................................................................191.000.00-------------------------------------------------------------------------------1.00------------------------------------
......................................................GGCGGCGCCTCCGGGCGCGAC...............................................................................................................................................................................211.000.00---------------------------------------------------------------------------1.00----------------------------------------
.......................................................................................................................................AGGTGCCGGGCGGAGGCC.................................................................................................1811.001.00---------------------1.00----------------------------------------------------------------------------------------------
............................................................................................................................................CCGGGCGGAGGCCCGGGT............................................................................................181.000.00---1.00----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GGGCGGAGGCCCGGCGCGGCGTTAGTAGA...............................................................................2911.001.00----------------------------------------------------------------------------------------------------1.00---------------
..........................................................................................................................................................GGCGCGGCGTTAGTAGCGAC............................................................................201.000.00------1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................ACTTTGTGGCTGGAGTGG......181.000.00------------------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................................................................GTTAGTAGAGACGCGCCGG.....................................................................1911.001.00-----------------------------------------------1.00--------------------------------------------------------------------
..........................................................................................................GCCGGGCGCGGGGGGAGCGG............................................................................................................................201.000.00-----------------------------------------------------------------------------------------------------1.00--------------
...................................................................................................................................................GAGGCCCGGCGCGGCAGC.....................................................................................181.000.00------------------------------------------------------------1.00-------------------------------------------------------
...............................................................................................................................................................................CGCCGGGTGCCAGCCCCTCGCC.....................................................2211.001.00---------------------------------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................................................................ACTTTGTGGCTGGAGCCCTGC...211.000.00------------------1.00-------------------------------------------------------------------------------------------------
....................AGTACCGGGCGCTCATCAACTCCGCCC...........................................................................................................................................................................................................271.000.00------------------1.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ATTGTTGACAAAGTGCGCG.........................191.000.00----------------------------------------------------------------1.00---------------------------------------------------
..............................................................................................................................................GGGCGGAGGCCCGGCGCGGCGTTAGTAGAGA.............................................................................3111.001.00-------------------------------------------------------------------------------------------------------------1.00------
.....................GTACCGGGCGCTCATCA....................................................................................................................................................................................................................1711.001.00-------------------------------------------------------------1.00------------------------------------------------------
........................................................................................................................................................................AGAGACGCGCCGGGTG..................................................................1611.001.00-------------------1.00------------------------------------------------------------------------------------------------
..................................................GTAAGGCGGCGCCTCCGGGCGGCGCGGGCC..........................................................................................................................................................................3011.001.00----------------------------------------------------------------------------------1.00---------------------------------
..............................................................................................................................................................CGGCGTTAGTAGAGACGCG.........................................................................1911.001.00-----------------------------------------------------------------------------------------------------------1.00--------
..........................................................................................................................................................GGCGCGGCGTTAGTAGAGAC............................................................................2011.001.00------1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CGGGCGGAGGCCCGGGTT...........................................................................................181.000.00----------------------------------------------------------------------------------------1.00---------------------------
.............................................................................................................................................CGGGCGGAGGCCCGGCGCGGCGTTAGTAGAG..............................................................................3111.001.00------------------------------------------------------------------------1.00-------------------------------------------
.............................................................................................................................................................................CGCGCCGGGTGCCAGCCCCT.........................................................2011.001.00---------------------------------------------------------------------------------------------1.00----------------------
..........................................................................................................GCCGGGCGCGGGGGGAGAAG............................................................................................................................201.000.00----------------------------------------------------------------------------1.00---------------------------------------
.............................................................................................................................................CGGGCGGAGGCCCGGCGCGGCGTTAGTAGA...............................................................................3011.001.00-------------------------------------------------1.00------------------------------------------------------------------
....................................................................................................CCCTGCGCCGGGCGCCA.....................................................................................................................................171.000.00------------------------------------------------------1.00-------------------------------------------------------------
.............................................................................................................GGGCGCGGGGGGAGGGA............................................................................................................................171.000.00---------------------------------------------------------------------------------------------------------1.00----------
...........................................................................................................................................GCCGGGCGGAGGCCCGGCGCGGCGTTAGTAG................................................................................3111.001.00----1.00---------------------------------------------------------------------------------------------------------------
............................................................................GGCCCGGACGGGCCGAAAT...........................................................................................................................................................191.000.00--------------------1.00-----------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TGACAAAGTGCTCCCACTTTGTGGCTGGAG.........3011.001.00----1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GGGCGGAGGCCCGGCGCGGCGTTAGTAGAGAC............................................................................3211.001.00---------------1.00----------------------------------------------------------------------------------------------------
...........................................................................................................................................GCCGGGCGGAGGCCCGGGGA...........................................................................................201.000.00---1.00----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CGCGGCGTTAGTAGAG..............................................................................1611.001.00--1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................GGGCGCGGGGGGAGGCGAA..........................................................................................................................191.000.00------------------------1.00-------------------------------------------------------------------------------------------
.......................................CTCCGTCCAACGTAAGGC.................................................................................................................................................................................................1811.001.00--1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CGCCGGGTGCCAGCCCCTCGT......................................................211.000.00--------------------------------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................CGCCGGGTGCCAGCCCC..........................................................1711.001.00-------------------------------------------------------------------------------------------------1.00------------------
..........................................................................................................GCCGGGCGCGGGGGGGTG..............................................................................................................................181.000.00--------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................CCGGGCGCGGGGGGAGGGCA...........................................................................................................................2011.001.00----------------------------------1.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................CCTTAAATTGTTGACAAAGT..............................2011.001.00---------------------------------------------------------------------------------------------------1.00----------------
................................................................................................................................CGGAGGCAGGTGCCGGGCGGAGG...................................................................................................2311.001.00-----------------------------------------------------------1.00--------------------------------------------------------
.............................................................................................................................................................................CGCGCCGGGTGCCAGCCC...........................................................1811.001.00-1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................GCCGGGCGCGGGGGGAGGGC............................................................................................................................2011.001.00-------------1.00------------------------------------------------------------------------------------------------------
................................................................CCGGGCGGCGCGGGCCCGGG......................................................................................................................................................................201.000.00---1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................CCGGGCGCGGGGGGAGGG.............................................................................................................................1820.500.50----------------------------------------------------------------------------------------------------------------0.50---
..........................................................................................................GCCGGGCGCGGGGGGAGG..............................................................................................................................1820.500.50--------------------------------------------------------------------------------------------------------------0.50-----
...............................................................................................CCCCGCCCTGCGCCGGG..........................................................................................................................................1720.500.50---------------------------------------------------------------------------------------------------------------0.50----
................................................................................................................................................................GCGTTAGTAGAGACG...........................................................................1520.500.50--------0.50-----------------------------------------------------------------------------------------------------------
............................................................................................................CGGGCGCGGGGGGAGG..............................................................................................................................1670.430.43---0.29---------------------------------------------------------------------------------------------------------------0.14
..........................................................................................................GCCGGGCGCGGGGGGA................................................................................................................................1640.250.25-----------------------------------------------------------------------------------------------------------------0.25--
..........................................................................................................GCCGGGCGCGGGGGGACGG.............................................................................................................................1940.250.25---0.25----------------------------------------------------------------------------------------------------------------
..................................................................GGGCGGCGCGGGCCCGG.......................................................................................................................................................................1740.250.25---0.25----------------------------------------------------------------------------------------------------------------
.............................................................................................................GGGCGCGGGGGGAGGGC............................................................................................................................1760.170.17--------------------------------------------0.17-----------------------------------------------------------------------

Antisense strand
GTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCCGTCCAACGTAAGGCGGCGCCTCCGGGCGGCGCGGGCCCGGACGGGCCGCTGTCCCCGCCCTGCGCCGGGCGCGGGGGGAGGGCACCGGAGGCAGGTGCCGGGCGGAGGCCCGGCGCGGCGTTAGTAGAGACGCGCCGGGTGCCAGCCCCTCGCCGCACCTTAAATTGTTGACAAAGTGCTCCCACTTTGTGGCTGGAGCCGTACGAC
.....................................................................((((((((((..((((((....))))))..)))).)))))).((((((((((..((((((...(((..(((((((((....))))))))).(((((......)))))))).))))))..)))))))).))...................................................
..................................................................67...................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577453(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040007(GSM532892)
G601T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR191469(GSM715579)
117genomic small RNA (size selected RNA from . (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782TAX577740(Rovira)
total RNA. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191541(GSM715651)
63genomic small RNA (size selected RNA from t. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029127(GSM416756)
A549. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
...................................TACGTTGGACGGAGTTGA..................................................................................................................................................................................................... 18112.0012.001.009.002.00-----------------------------------------------------------------------------------------------------------------
...........CCCGGTACTGATGGCGGA............................................................................................................................................................................................................................. 18111.0011.00-1.001.00-----1.002.00------------1.00-----------------------1.00---1.00----------------------1.00-----------1.00-1.00----------------------------
..............................TTGGACGGAGTTGATGAGC......................................................................................................................................................................................................... 1917.007.00-------7.00------------------------------------------------------------------------------------------------------------
.........CGGTACTGATGGCGGATC............................................................................................................................................................................................................................... 1817.007.00-----3.001.00--1.001.00---------1.00-----------------------------------------------------------------------------------------------
....GTACTGATGGCGGATCTGGCG................................................................................................................................................................................................................................. 2116.006.004.00-----1.00-----1.00-------------------------------------------------------------------------------------------------------
...ACTGATGGCGGATCTGGCGG................................................................................................................................................................................................................................... 2016.006.003.00---------1.00---------------------------1.00--------------------------1.00--------------------------------------------------
.......GTACTGATGGCGGATCTG................................................................................................................................................................................................................................. 1816.006.00--2.00---------1.00-----------1.00---------------1.00-------------------------------------------1.00-------------------------------
......GGTACTGATGGCGGATCTGG................................................................................................................................................................................................................................ 2016.006.004.00---------------1.00----------------------------------------------------1.00----------------------------------------------
..........CCCGGTACTGATGGCGGAT............................................................................................................................................................................................................................. 1916.006.00---------------------2.001.00---1.00--------------1.00------------------------------------------------------------1.00-------------
..............AGCGCCCGGTACTGATGGC......................................................................................................................................................................................................................... 1915.005.00-----2.00-----------2.00------------------------------------------------------------------------------------------1.00-------
......GTACTGATGGCGGATCTGG................................................................................................................................................................................................................................. 1915.005.002.00----1.00------1.00------------------------------1.00------------------------------------------------------------------------
..............................TGGACGGAGTTGATGAGC.......................................................................................................................................................................................................... 1815.005.00-5.00------------------------------------------------------------------------------------------------------------------
..............GCGCCCGGTACTGATGGC.......................................................................................................................................................................................................................... 1814.004.00-2.001.00--------------------------------------------------------------------------1.00--------------------------------------
.................ATCAGTACCGGGCGCTCATCAAT.................................................................................................................................................................................................................. 234.000.00----4.00---------------------------------------------------------------------------------------------------------------
.....ACTGATGGCGGATCTGGC................................................................................................................................................................................................................................... 1814.004.002.00-1.00-----------------------------------1.00-----------------------------------------------------------------------------
......CGGTACTGATGGCGGATCTGG............................................................................................................................................................................................................................... 2114.004.003.00---1.00---------------------------------------------------------------------------------------------------------------
.ATGGCGGATCTGGCGGCA....................................................................................................................................................................................................................................... 1813.003.00------1.00------------------1.00------------------------------1.00-----------------------------------------------------------
.......GGTACTGATGGCGGATCTG................................................................................................................................................................................................................................ 1913.003.00-----------1.00-----------1.00---------1.00----------------------------------------------------------------------------------
.GATGGCGGATCTGGCGGCA...................................................................................................................................................................................................................................... 1913.003.00-----------1.00-------------------------------1.00---------------------------1.00--------------------------------------------
........CGGTACTGATGGCGGATCT............................................................................................................................................................................................................................... 1913.003.00-------------2.00---1.00--------------------------------------------------------------------------------------------------
...............AGCGCCCGGTACTGATGG......................................................................................................................................................................................................................... 1813.003.00-----2.00----------------------------------------------------------------1.00---------------------------------------------
..................GATGAGCGCCCGGTACTGA..................................................................................................................................................................................................................... 1913.003.003.00-------------------------------------------------------------------------------------------------------------------
............................GACGGAGTTGATGAGCGC............................................................................................................................................................................................................ 1812.002.00--1.00--1.00--------------------------------------------------------------------------------------------------------------
.....CCCGGTACTGATGGCGGATCTGGC............................................................................................................................................................................................................................. 2412.002.00------------1.00----------------------------------------------------------------------------------1.00--------------------
.........................................................................................................................................................................................................................AGTGCTCCCACTTTGTCTGT............. 202.000.002.00-------------------------------------------------------------------------------------------------------------------
.............................GGACGGAGTTGATGAGCG........................................................................................................................................................................................................... 1812.002.00----------------------------------1.00---------------------------------------------------1.00-----------------------------
...............GAGCGCCCGGTACTGATGG........................................................................................................................................................................................................................ 1912.002.00-------------------------1.00-------------------------------------1.00----------------------------------------------------
..............................GTTGGACGGAGTTGATGAGC........................................................................................................................................................................................................ 2012.002.001.00----------------------------1.00--------------------------------------------------------------------------------------
.TGGCGGATCTGGCGGCA........................................................................................................................................................................................................................................ 1712.002.00-----------1.00--------1.00-----------------------------------------------------------------------------------------------
.......CCGGTACTGATGGCGGATCTG.............................................................................................................................................................................................................................. 2112.002.00-----------------------1.00--------------------------------------------------------------------------1.00-----------------
..........CCGGTACTGATGGCGGAT.............................................................................................................................................................................................................................. 1812.002.00----------------------1.00-------------1.00-------------------------------------------------------------------------------
......TACTGATGGCGGATCTGG.................................................................................................................................................................................................................................. 1812.002.00------------------------------------------------------------------1.00------------------------1.00------------------------
........ACTGATGGCGGATCT................................................................................................................................................................................................................................... 1512.002.00-------------------2.00------------------------------------------------------------------------------------------------
.........................................................................................................CGCCGGGCGCGGGGGGGC............................................................................................................................... 182.000.00---2.00----------------------------------------------------------------------------------------------------------------
........................GAGTTGATGAGCGCCCGG................................................................................................................................................................................................................ 1812.002.001.00---1.00---------------------------------------------------------------------------------------------------------------
....CGCCCGGTACTGATGGCGGATCTGGCG........................................................................................................................................................................................................................... 2712.002.00-------------------------------1.00-----1.00------------------------------------------------------------------------------
..............GAGCGCCCGGTACTGATGGC........................................................................................................................................................................................................................ 2012.002.002.00-------------------------------------------------------------------------------------------------------------------
....TGATGGCGGATCTGGCG..................................................................................................................................................................................................................................... 1712.002.00---------------------------2.00----------------------------------------------------------------------------------------
..GCCCGGTACTGATGGCGGATCTGGCGGC............................................................................................................................................................................................................................ 2812.002.00--2.00-----------------------------------------------------------------------------------------------------------------
......................GTTGATGAGCGCCCGGTA.................................................................................................................................................................................................................. 1812.002.002.00-------------------------------------------------------------------------------------------------------------------
......GCGCCCGGTACTGATGGCGGATCTGG.......................................................................................................................................................................................................................... 2612.002.00----------------2.00---------------------------------------------------------------------------------------------------
.......CGGTACTGATGGCGGATCTG............................................................................................................................................................................................................................... 2012.002.00--------------------------1.00----1.00------------------------------------------------------------------------------------
........CCCGGTACTGATGGCGGATCT............................................................................................................................................................................................................................. 2112.002.00------2.00-------------------------------------------------------------------------------------------------------------
......GAGCGCCCGGTACTGATGGCGGATCTGG........................................................................................................................................................................................................................ 2811.001.00--------------------------------------------1.00-----------------------------------------------------------------------
.............GCCCGGTACTGATGGCG............................................................................................................................................................................................................................ 1711.001.00--------------1.00-----------------------------------------------------------------------------------------------------
.............GCGCCCGGTACTGATGGCG.......................................................................................................................................................................................................................... 1911.001.00---------------------------------1.00----------------------------------------------------------------------------------
................................TCATCAACTCCGTCCAAT........................................................................................................................................................................................................ 181.000.00------------------------------------------------------------------------------------------1.00-------------------------
............................CTTACGTTGGACGGAGTTGATGAGCGC................................................................................................................................................................................................... 2711.001.00-----------1.00--------------------------------------------------------------------------------------------------------
......CCAGATCCGCCATCAGTAGGA............................................................................................................................................................................................................................... 211.000.001.00-------------------------------------------------------------------------------------------------------------------
..CTGATGGCGGATCTGGCGGC.................................................................................................................................................................................................................................... 2011.001.00-----1.00--------------------------------------------------------------------------------------------------------------
........................................................CGGCGCCTCCGGGCGGGC................................................................................................................................................................................ 181.000.00---1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................CCGGGCGCGGGGGGAGG.............................................................................................................................. 171.000.00-----------------------------------------------------------------------------------1.00--------------------------------
...............TGAGCGCCCGGTACTGATGG....................................................................................................................................................................................................................... 2011.001.00-----------------------------------------1.00--------------------------------------------------------------------------
........GTACTGATGGCGGATCT................................................................................................................................................................................................................................. 1711.001.00-----------------------------------1.00--------------------------------------------------------------------------------
.....GTACTGATGGCGGATCTGGC................................................................................................................................................................................................................................. 2011.001.00---------------1.00----------------------------------------------------------------------------------------------------
.......................AGTTGATGAGCGCCCGGT................................................................................................................................................................................................................. 1811.001.00-----------------------------------------------------1.00--------------------------------------------------------------
.......GCGCCCGGTACTGATGGCGGATCTG.......................................................................................................................................................................................................................... 2511.001.00------1.00-------------------------------------------------------------------------------------------------------------
........AGATCCGCCATCAGTACTGCG............................................................................................................................................................................................................................. 211.000.001.00-------------------------------------------------------------------------------------------------------------------
...........................TACGTTGGACGGAGTTGATGAGCGCC..................................................................................................................................................................................................... 2611.001.00--------------------------------------------------------------------------------------------1.00-----------------------
..CGCCCGGTACTGATGGCGGATCTGGCGGC........................................................................................................................................................................................................................... 2911.001.00---------------------------------------------------------1.00----------------------------------------------------------
........................CGGAGTTGATGAGCGCCCGG.............................................................................................................................................................................................................. 2011.001.001.00-------------------------------------------------------------------------------------------------------------------
.CCGGTACTGATGGCGGATCTGGCGGCA.............................................................................................................................................................................................................................. 2711.001.00------------------------------------------1.00-------------------------------------------------------------------------
............................................................................................................................................CCGGGCGGAGGCCCGGCGAGGA........................................................................................ 221.000.00---1.00----------------------------------------------------------------------------------------------------------------
.........GCGCCCGGTACTGATGGCGGATC.......................................................................................................................................................................................................................... 2311.001.00----------1.00---------------------------------------------------------------------------------------------------------
.......................................GCCTTACGTTGGACGGAG................................................................................................................................................................................................. 1811.001.00--------1.00-----------------------------------------------------------------------------------------------------------
..............ATGAGCGCCCGGTACTGATGGC...................................................................................................................................................................................................................... 2211.001.00-----------------------------1.00--------------------------------------------------------------------------------------
...............................GGACGGAGTTGATGAG........................................................................................................................................................................................................... 1611.001.00----------------------------------------------------------------------------------------------1.00---------------------
.......................ACGGAGTTGATGAGCGCCCGGT............................................................................................................................................................................................................. 2211.001.00------------------------------------------1.00-------------------------------------------------------------------------
.....TACTGATGGCGGATCTGGC.................................................................................................................................................................................................................................. 1911.001.00---------------1.00----------------------------------------------------------------------------------------------------
.............................ACGGAGTTGATGAGCG............................................................................................................................................................................................................. 1611.001.00------------------------------------------------------------------------------------------------1.00-------------------
............GCCCGGTACTGATGGCGG............................................................................................................................................................................................................................ 1811.001.00----------1.00---------------------------------------------------------------------------------------------------------
.......CAGATCCGCCATCAGTACAA............................................................................................................................................................................................................................... 201.000.00---------1.00----------------------------------------------------------------------------------------------------------
................GTTGATGAGCGCCCGGTACTGATG.................................................................................................................................................................................................................. 2411.001.00------------------------------------------------1.00-------------------------------------------------------------------
.....CGCCCGGTACTGATGGCGGATCTGGC........................................................................................................................................................................................................................... 2611.001.00----------------------------------------------------------------------------------------------------------1.00---------
..................TGATGAGCGCCCGGTACTGA.................................................................................................................................................................................................................... 2011.001.00----1.00---------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................ACAATTTAAGGTGCGGC....................................... 1711.001.00--------------1.00-----------------------------------------------------------------------------------------------------
......CGCCCGGTACTGATGGCGGATCTGG........................................................................................................................................................................................................................... 2511.001.001.00-------------------------------------------------------------------------------------------------------------------
.................................TACGTTGGACGGAGTTGATG..................................................................................................................................................................................................... 2011.001.001.00-------------------------------------------------------------------------------------------------------------------
.....GCGCCCGGTACTGATGGCGGATCTGGC.......................................................................................................................................................................................................................... 2711.001.00----------------------------------------1.00---------------------------------------------------------------------------
......CCGGTACTGATGGCGGATCTGG.............................................................................................................................................................................................................................. 2211.001.00-------------------------------------------------------------------1.00------------------------------------------------
...CCGCCAGATCCGCCATCGCG................................................................................................................................................................................................................................... 201.000.00----------------------------------------------------------1.00---------------------------------------------------------
.................GAGCGCCCGGTACTGAT........................................................................................................................................................................................................................ 1711.001.00--------------1.00-----------------------------------------------------------------------------------------------------
..GCCGCCAGATCCGCCATCAGTCCA................................................................................................................................................................................................................................ 241.000.00----------------------------------------------------1.00---------------------------------------------------------------
.............................................................................................................GGGCGCGGGGGGAGGCCGC.......................................................................................................................... 191.000.00-------------------------------------1.00------------------------------------------------------------------------------
............................................................................................TGTCCCCGCCCTGCGCAGG........................................................................................................................................... 191.000.00---------------------------------------------------1.00----------------------------------------------------------------
.........GATCCGCCATCAGTACCTG.............................................................................................................................................................................................................................. 191.000.001.00-------------------------------------------------------------------------------------------------------------------
..................GGAGTTGATGAGCGCCCGGTACTGA............................................................................................................................................................................................................... 2511.001.00------------------------------------------------------------------------------1.00-------------------------------------
......GCCCGGTACTGATGGCGGATCTGG............................................................................................................................................................................................................................ 2411.001.00--------1.00-----------------------------------------------------------------------------------------------------------
...CTGATGGCGGATCTGGCGG.................................................................................................................................................................................................................................... 1911.001.00----1.00---------------------------------------------------------------------------------------------------------------
......................................................GGCGGCGCCTCCGGGCGA.................................................................................................................................................................................. 181.000.00------------------------------1.00-------------------------------------------------------------------------------------
..................TTGATGAGCGCCCGGTACTGA................................................................................................................................................................................................................... 2111.001.00---------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................AGGCCCGGCGCGGCGGGG.................................................................................... 181.000.00------------------------------------1.00-------------------------------------------------------------------------------
..GCCGCCAGATCCGCCATC...................................................................................................................................................................................................................................... 181.000.00------------------------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................GTGCCGGGCGGAGGCGAT............................................................................................... 181.000.00-------------------------------------------------------------------------------------------------------1.00------------
.ACTGATGGCGGATCTGGCGGCA................................................................................................................................................................................................................................... 2211.001.00--------------------------------------------------------------------------------1.00-----------------------------------
...............GGAGTTGATGAGCGCCCGGTACTGATGG............................................................................................................................................................................................................... 2811.001.00--------------------------------------------------------------------1.00-----------------------------------------------
.GTACTGATGGCGGATCTGGCGGCA................................................................................................................................................................................................................................. 2411.001.00--------------------------------1.00-----------------------------------------------------------------------------------
.......CAGATCCGCCATCAGTTCT................................................................................................................................................................................................................................ 191.000.00--------------------------------------------------------------------------------------------------------1.00-----------
...............GCGCCCGGTACTGATGG.......................................................................................................................................................................................................................... 1711.001.00----1.00---------------------------------------------------------------------------------------------------------------
..........CGGTACTGATGGCGGAT............................................................................................................................................................................................................................... 1711.001.00------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................AGGCCCGGCGCGGCGGTAG................................................................................... 191.000.00--------------------------------------------------------------------------1.00-----------------------------------------
.CGGTACTGATGGCGGATCTGGCGGCA............................................................................................................................................................................................................................... 2611.001.00--------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................CCGGCGCAGGGCGGG........................................................................................................................................... 1570.430.43---------------------------------------------0.140.14-------------------------------------------------------------------0.14-
................................................................................................................................................................................GGGGCTGGCACCCGGC.......................................................... 1630.330.33--------------------------------------------------------------------------------------------------------------0.33-----