ID: uc001ldp.1_intron_0_0_chr10_120354763_r
GENE: PRLHR(1)
chr10:120354713-120355077-


(1)
B-CELL 		(2)
BRAIN 		(4)
BREAST 		(5)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(1)
HELA 		(2)
OTHER 		(17)
SKIN

Sense strand
TGCCCCTTCTTCCCGCGAGTGCTTTCCCGCTCTCCAAACCCCACTCCCAGGTAGGATCGCGCTCCTGAGTCTGCCTGCGTGGACTGCGAGGACCGTAAATAGAGGCGGAAGCGTTTAAATAAACCGTATGTTCTAACCGTGCTTAGGTTTATTTTACAGAGGTGAGAGGACAACACTTTTTGCTACTTTTGCTGTTGTTCTGTGGCCGGTTATTCCCAAGGGAGGACTCAGGCGATGGGGGAGGGGCGCGGCTGGTGTAGGAGGTCGGATGGAGTATGGCAAGGGAAGTGACGGACTTTGATTACCTTTGAACAGGTGGCCATGGCCTCATCGACCACTCGGGGCCCCAGGGTTTCTGACTTATT
...................................................................................................((((.((....)).)))).....(((...((..(((.((((((((...........((((.((..((((..(((......)))...))))..)).))))(((((.(((((((.((((....))))))))..))).)))))....)))))))).)))..))...)))....................................................................................................
...................................................................................................100.....................................................................................................................................................................267................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR189782TAX577738(Rovira)
total RNA. (breast)		SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
.....................................................................................................................................................................................................................................................GCGCGGCTGGTGTAG.........................................................................................................15116.0016.004.00-1.00-2.001.00-1.00-------1.001.00---1.00---1.00---1.00------1.001.00---
.....................................................................................................................................................................................................................................................GCGCGGCTGGTGTAGTGG......................................................................................................1819.0016.001.00--2.00---1.001.00-1.00---------------1.00----1.001.00-------
........................................................................................................GCGGAAGCGTTTAAACTGT..................................................................................................................................................................................................................................................196.000.00-6.00--------------------------------------
.....................................................................................................................................................................................................................................................GCGCGGCTGGTGTAGT........................................................................................................1616.0016.003.00-------1.00------------1.00------------1.00-----
.....................................................................................................................................................................................................................................................GCGCGGCTGGTGTAGTG.......................................................................................................1715.0016.001.00----1.00-----------1.00---------1.00-1.00----------
.....................................................................................................................................................................................................................................................GCGCGGCTGGTGTAGTGGT.....................................................................................................1912.0016.00---1.00-----------------------------1.00------
..CCCCTTCTTCCCGCGC...........................................................................................................................................................................................................................................................................................................................................................162.000.00------------1.001.00--------------------------
............................................................................................................................................................................................................................................................TGGTGTAGGAGGTCGTTTT..............................................................................................191.000.00------1.00---------------------------------
.......................TTCCCGCTCTCCAAAACGA...................................................................................................................................................................................................................................................................................................................................191.000.00--1.00-------------------------------------
.........................................................................................................................................................................................................................................................GGCTGGTGTAGGAGGAGAA.................................................................................................191.000.00------------------------------1.00---------
.....................................................................................................................................................................................................................................................GCGCGGCTGGTGTAGGGG......................................................................................................181.000.00-----------------------1.00----------------
.......................................................................................................................................................................................................................................................GCGGCTGGTGTAGGACGG....................................................................................................181.000.00-------------------------1.00--------------
.....................................................................................................................................................................................................................................................GCGCGGCTGGTGTAGAGG......................................................................................................1811.0016.00----------1.00-----------------------------
........................................................................................................................................................................................................................................................CGGCTGGTGTAGGAGGGT...................................................................................................181.000.00--------------1.00-------------------------
..........................................................................................................................................................................................................................................................................................................TGATTACCTTTGAACTCTG................................................191.000.00-------------------1.00--------------------
........................................................................................................GCGGAAGCGTTTAAACGGT..................................................................................................................................................................................................................................................191.000.00-1.00--------------------------------------
..CCCCTTCTTCCCGCGCCC.........................................................................................................................................................................................................................................................................................................................................................181.000.001.00---------------------------------------
...................................................................................................................................................................................................................................TCAGGCGATGGGGGAAGT........................................................................................................................181.000.00------------------1.00---------------------
...............................................CAGGTAGGATCGCGC...............................................................................................................................................................................................................................................................................................................1520.500.50--------------------------------------0.50-

Antisense strand
TGCCCCTTCTTCCCGCGAGTGCTTTCCCGCTCTCCAAACCCCACTCCCAGGTAGGATCGCGCTCCTGAGTCTGCCTGCGTGGACTGCGAGGACCGTAAATAGAGGCGGAAGCGTTTAAATAAACCGTATGTTCTAACCGTGCTTAGGTTTATTTTACAGAGGTGAGAGGACAACACTTTTTGCTACTTTTGCTGTTGTTCTGTGGCCGGTTATTCCCAAGGGAGGACTCAGGCGATGGGGGAGGGGCGCGGCTGGTGTAGGAGGTCGGATGGAGTATGGCAAGGGAAGTGACGGACTTTGATTACCTTTGAACAGGTGGCCATGGCCTCATCGACCACTCGGGGCCCCAGGGTTTCTGACTTATT
...................................................................................................((((.((....)).)))).....(((...((..(((.((((((((...........((((.((..((((..(((......)))...))))..)).))))(((((.(((((((.((((....))))))))..))).)))))....)))))))).)))..))...)))....................................................................................................
...................................................................................................100.....................................................................................................................................................................267................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR189782TAX577738(Rovira)
total RNA. (breast)		SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
.........................................................................................................................................................................................................................................CCGCGCCCCTCCCCCATC.................................................................................................................. 1812.002.00---------2.00------------------------------
...............................................................................................TAAATAGAGGCGGAAT.............................................................................................................................................................................................................................................................. 161.000.00-----------1.00----------------------------
..CCCCTTCTTCCCGCGAGT......................................................................................................................................................................................................................................................................................................................................................... 181.000.00----------------------1.00-----------------
.............................................................................................................................................................................................................................................GGGGAGGGGCGCGGCGATC............................................................................................................. 191.000.00-------------------------------------1.00--
..............................................................................................................................................................................................................................................................................................AGTGACGGACTTTGACTCG............................................................ 191.000.00--1.00-------------------------------------
..................................CAAACCCCACTCCCATATA........................................................................................................................................................................................................................................................................................................................ 191.000.00------1.00---------------------------------
..............................................................................................GTAAATAGAGGCGGATTC............................................................................................................................................................................................................................................................. 181.000.00-----------1.00----------------------------
......................................................................................................................................................................................................................................................................................TCCGTCACTTCCCTTGC...................................................................... 1720.500.50------------0.50---------------------------
...............................................................................................................................................................................................................................................................................................................................................CCCTGGGGCCCCGAGTG............. 1740.250.25---------------------------------------0.25