ID: uc001ldd.1_intron_1_0_chr10_119001326_f.5p
GENE: (2)
chr10:119001276-119001525+


(6)
B-CELL
(8)
BREAST
(20)
CELL-LINE
(5)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(1)
KIDNEY
(8)
LIVER
(1)
OTHER
(16)
SKIN
(2)
UTERUS

Sense strand
CATCGTGTTCCTGGCGCTGCTGCTGGACAACATGCTGCTCACTGTCGTGGGTACGTGCGGACAGGGCACCCCTGCCCCGGCACCCCAGCCCCAGCGCCCCTTCCCCGGCACTCCACTTACCCCTGCGCGGTCCCGGAGCTCCGCCAAGGCCCGGGAAAGTTGGAGAACTCGCTTTGCAAAAAAGACATCCCCTCCAGGCTGCCGCGCCGGGGCTAGGAGGAGCCGCGTTGTGTGGCTTCGCTTTCCTGAT
........................................................................................................((((((.............))).)))((((((.(((.......)))))))))...((((((......((((.....)))).......)))))).....................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR038855(GSM458538)
D10. (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037937(GSM510475)
293cand2. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189785SRR038857(GSM458540)
D20. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR040019(GSM532904)
G701T. (cervix)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR040009(GSM532894)
G727T. (cervix)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
TAX577741(Rovira)
total RNA. (breast)
GSM532884(GSM532884)
G871T. (cervix)
SRR038854(GSM458537)
MM653. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................................................................AAAAAAGACATCCCCCACA......................................................1973.000.00-7.007.00-5.004.003.004.003.004.001.001.002.001.003.003.002.00-1.00-2.002.00------1.001.00-------1.001.00---1.00-1.00-1.001.001.00---1.001.00-1.00-1.00--1.001.001.00--1.001.00-------
.....................................................................................................TCCCCGGCACTCCACCA....................................................................................................................................1722.000.003.00--4.00------1.00-------1.002.00--1.001.001.00--------1.00-----1.00-1.00--------1.00---1.00---1.001.00---1.00----------
.................................................................................................................................................................................AAAAAAGACATCCCCCATA......................................................194.000.00-----------3.00----------------------1.00---------------------------------------
.....................................................................................................TCCCCGGCACTCCACCAT...................................................................................................................................183.000.002.00----1.00--------------------------------------------------------------------
.................................................................................................................................................................................AAAAAAGACATCCCCCACC......................................................193.000.00------2.00---------1.00---------------------------------------------------------
.....................................................................................................TCCCCGGCACTCCACCATT..................................................................................................................................192.000.002.00-------------------------------------------------------------------------
.................................................................................................................................................................................AAAAAAGACATCCCCCAC.......................................................182.000.00------------1.00----1.00--------------------------------------------------------
.................................................................................................................................................................................AAAAAAGACATCCCCTACA......................................................191.000.00--------1.00-----------------------------------------------------------------
.....................................................................................................TCCCCGGCACTCCACCCA...................................................................................................................................181.000.001.00-------------------------------------------------------------------------
.........................................CTGTCGTGGGTACGTGAGCC.............................................................................................................................................................................................201.000.00-------------------------------------------1.00------------------------------
.....................................................................................................TCCCCGGCACTCCACCAGA..................................................................................................................................191.000.00---1.00----------------------------------------------------------------------
.............................................................................................................................................................................................................GCCGGGGCTAGGAGGAGAA..........................191.000.00-------------------------------------------------1.00------------------------
.................................................................................................................................................................................AAAAAAGACATCCCCAAA.......................................................181.000.00---------------------------------------------------1.00----------------------
.....................................................................................................TCCCCGGCACTCCACCAAC..................................................................................................................................191.000.001.00-------------------------------------------------------------------------
.....................................................................................................TCCCCGGCACTCCACCAA...................................................................................................................................181.000.00-----------------------------------1.00--------------------------------------
................................TGCTGCTCACTGTCGTGCTC......................................................................................................................................................................................................201.000.00------------------------------1.00-------------------------------------------
.ATCGTGTTCCTGGCGTTC.......................................................................................................................................................................................................................................181.000.00----------1.00---------------------------------------------------------------
.................................................................................................................................................................................AAAAAAGACATCCCCAACA......................................................191.000.00-------------1.00------------------------------------------------------------
.................................................................................................................................................................................AAAAAAGACATCCCCTAGA......................................................191.000.00-----------------1.00--------------------------------------------------------
.................................................................................................................................................................................AAAAAAGACATCCCCCCCC......................................................191.000.00----------1.00---------------------------------------------------------------
.................................................................................................................................................................................AAAAAAGACATCCCCTGGTC.....................................................201.000.00------------------------------------1.00-------------------------------------
...........................................GTCGTGGGTACGTGCTTG.............................................................................................................................................................................................181.000.001.00-------------------------------------------------------------------------
.....................................................................................................TCCCCGGCACTCCACCAAT..................................................................................................................................191.000.00--------------------------------------------------------1.00-----------------
.ATCGTGTTCCTGGCGCTGCTGCTGG................................................................................................................................................................................................................................2511.001.00----------------------------------------------------------------1.00---------
.....................................................................................................................................................................................................GCTGCCGCGCCGGGGC.....................................1630.330.33----------------------0.33---------------------------------------------------
.................................................................................................CCCTTCCCCGGCACT..........................................................................................................................................1540.250.25-----------------------------------------------------------------------0.25--
...............GCTGCTGCTGGACAAC...........................................................................................................................................................................................................................1650.200.20-------------------------------------------------------------------------0.20

Antisense strand
CATCGTGTTCCTGGCGCTGCTGCTGGACAACATGCTGCTCACTGTCGTGGGTACGTGCGGACAGGGCACCCCTGCCCCGGCACCCCAGCCCCAGCGCCCCTTCCCCGGCACTCCACTTACCCCTGCGCGGTCCCGGAGCTCCGCCAAGGCCCGGGAAAGTTGGAGAACTCGCTTTGCAAAAAAGACATCCCCTCCAGGCTGCCGCGCCGGGGCTAGGAGGAGCCGCGTTGTGTGGCTTCGCTTTCCTGAT
........................................................................................................((((((.............))).)))((((((.(((.......)))))))))...((((((......((((.....)))).......)))))).....................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR038855(GSM458538)
D10. (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037937(GSM510475)
293cand2. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189785SRR038857(GSM458540)
D20. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR040019(GSM532904)
G701T. (cervix)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR040009(GSM532894)
G727T. (cervix)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
TAX577741(Rovira)
total RNA. (breast)
GSM532884(GSM532884)
G871T. (cervix)
SRR038854(GSM458537)
MM653. (cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
.........................................................................................................................................CGGGCCTTGGCGGAGC................................................................................................. 1611.001.00--------------------------1.00-----------------------------------------------
..............................................................................................TGCCGGGGAAGGGGCG............................................................................................................................................ 1631.001.00-----------------------0.33---------------------------------------------0.330.33---
............GGCGCTGCTGCTGGAGAG............................................................................................................................................................................................................................ 181.000.00---------------------------------------------1.00----------------------------
.................................................................................................................................GTCCCGGAGCTCCGCCGGA...................................................................................................... 191.000.00--------------------------------1.00-----------------------------------------
....................................................................................................................TTACCCCTGCGCGGTAAA.................................................................................................................... 181.000.00-------------1.00------------------------------------------------------------
..............................................................................................................................GGCGGAGCTCCGGGACCGC......................................................................................................... 1911.001.00----------------------------------------1.00---------------------------------
.........................................................................GCCCCGGCACCCCAGCCG............................................................................................................................................................... 181.000.00-------------------------------1.00------------------------------------------
............................................................................................................................GGGCCTTGGCGGAGCTCCGGGACCGCGC.................................................................................................. 2811.001.00-------------------------1.00------------------------------------------------
........................................................................................................................CCCTGCGCGGTCCCGGAGCTCCGCCC........................................................................................................ 261.000.00---------------------------1.00----------------------------------------------
................................................................................................................................CGGAGCTCCGGGACC........................................................................................................... 1540.500.50--------------------------------------------------------------------0.50-----
..........................................................................................................................................CGGGCCTTGGCGGAG................................................................................................. 1520.500.50-------------------------------------------------------------------0.50------
...............................................................................................................................................................................................CGCGGCAGCCTGGAG............................................ 1540.250.25------------------------------------------------------------------------0.25-