ID: uc001kxr.2_intron_26_0_chr10_105807863_r.3p
GENE: (29)
chr10:105807813-105808062-


(1)
AGO1.ip 		(1)
AGO3.ip 		(1)
B-CELL 		(7)
BREAST 		(5)
CELL-LINE 		(1)
HELA 		(2)
LIVER 		(2)
OTHER 		(47)
SKIN

Sense strand
AAAAGAGACAATTGCTGGTTTAGGAGAAGGGGCAGTGGGAGTACCGTATCCAGAGAGTGTGACAGACAGGGCTGTCCCGTGGCTGATGGCTGCGTGGGCTCCTGGGACACAATGTGCTTCAAGGCCACTGGGACAGTAGAGGGAGGAATCGCAGAAATCACTCCAGGAGCAACTGAGAGACCTTGCTTCTACTTTACCAGGTCCTGCTGGCCCAGACGGACACCAAGGCCCAAGAGGTTGGTCACTCATC
...............................................................................................................................((((...((((((((((((..((.(((...((.......))....))).))..)))).))))))))...))))..................................................
...........................................................................................................................124.........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189786SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR189787
................................................................................................................................TGGGACAGTAGAGGGAGGAAT.....................................................................................................21127.0027.00-7.00-1.002.001.00--2.00-2.00--1.001.001.001.001.00-1.002.00-1.001.00-----------------------1.00------------1.00----
....................................................................................................................................ACAGTAGAGGGAGGAATCGCAG................................................................................................22125.0025.003.001.002.00---1.002.00-2.00--3.002.00--1.00---1.001.00-----1.00--1.00-------1.00------------1.00---1.00-----1.00---
.....................................................................................................................................CAGTAGAGGGAGGAATCGCAG................................................................................................2118.008.002.00-----1.00----------1.00-----1.00-------1.00----------------------1.00-1.00--------
..................................................................................................................................................................................GACCTTGCTTCTACTTTACCAGT.................................................2318.002.00----2.00----------1.00---------2.00---1.00-----1.001.00----------------------------
....................................................................................................................................ACAGTAGAGGGAGGAATCGCA.................................................................................................2115.005.001.00------1.00----------1.00-------------1.00---------------1.00----------------
................................................................................................................................TGGGACAGTAGAGGGAGGAATC....................................................................................................2213.003.00-----1.00--------2.00--------------------------------------------------
................................................................................................................................TGGGACAGTAGAGGGAGGAA......................................................................................................2013.003.00--------1.00-----------------1.00----------1.00---------------------------
...................................................................................................................................................................................................................CCAGACGGACACCAAGGCCCAAGA...............2413.003.00-----------3.00-----------------------------------------------------
....................................................................................................................................ACAGTAGAGGGAGGAATCGC..................................................................................................2013.003.00------2.00----------1.00-----------------------------------------------
................................................................................................................................TGGGACAGTAGAGGGAGGA.......................................................................................................1913.003.00---------1.00-------------------------------1.00-----------------1.00-----
....................................................................................................................................ACAGTAGAGGGAGGAATCGCAGA...............................................................................................2313.003.001.00----1.00------------1.00----------------------------------------------
.....................................................................................................................................CAGTAGAGGGAGGAATCGCAGA...............................................................................................2213.003.00---1.00--------------------------1.00--1.00-------------------------------
................................................................................................................................TGGGACAGTAGAGGGAGGAATCA...................................................................................................2313.003.00----------------1.00--1.00--------1.00------------------------------------
.....................................................................................................................................CAGTAGAGGGAGGAATCGCAGAAG.............................................................................................2412.001.00--2.00--------------------------------------------------------------
.....................................................................................................................................CAGTAGAGGGAGGAATCGCA.................................................................................................2012.002.00-----------1.00--------------------------------1.00--------------------
...................................................................................................................................GACAGTAGAGGGAGGAATCGC..................................................................................................2112.002.00----1.00-----------------------------1.00------------------------------
....................................................................................................................................ACAGTAGAGGGAGGAATCGCAGT...............................................................................................2312.0025.00--1.00------------------------------------1.00-------------------------
....................................................................................................................................ACAGTAGAGGGAGGAATCG...................................................................................................1912.002.00---1.00----------------------------1.00--------------------------------
....................................................................................................................................ACAGTAGAGGGAGGAATCGA..................................................................................................2012.002.00-------2.00---------------------------------------------------------
..................................................................................................................................................................................GACCTTGCTTCTACTTTACCAG..................................................2212.002.00----------1.00-----------1.00------------------------------------------
.............................................................................CGTGGCTGATGGCTGCGTATGC.......................................................................................................................................................221.000.00---------------------------------------------------------1.00-------
.............................................................................................................................................................................TGAGAGACCTTGCTTCTACTTT.......................................................2211.001.00----------1.00------------------------------------------------------
................................................................................................................................TGGGACAGTAGAGGGAA.........................................................................................................171.000.00---------------------------------------------1.00-------------------
................................................................................................................................TGGGACAGTAGAGGGAGGAATTT...................................................................................................2311.0027.00---------------------------1.00-------------------------------------
..........................AAGGGGCAGTGGGAGAATC.............................................................................................................................................................................................................191.000.00----------------------------------------------1.00------------------
................................................................................................................................TGGGACAGTAGAGGGAGGAAA.....................................................................................................2111.003.00----------------------------------------------------------1.00------
................................................................................................................................TGGGACAGTAGAGGGAGGAATT....................................................................................................2211.0027.00----------------------------1.00------------------------------------
................................................................................................................................TGGGACAGTAGAGGGAGGAATAA...................................................................................................2311.0027.00--------1.00--------------------------------------------------------
.....................................................................................................................................CAGTAGAGGGAGGAATCGCAGAA..............................................................................................2311.001.00---1.00-------------------------------------------------------------
......................................................................................................................................................................................................................GACGGACACCAAGGCCCAAGAG..............2211.001.00------1.00----------------------------------------------------------
.............................................................................................................................CACTGGGACAGTAGAGG............................................................................................................1711.001.00---------------------1.00-------------------------------------------
.....................................................................................................................................CAGTAGAGGGAGGAATCG...................................................................................................1811.001.001.00----------------------------------------------------------------
..................................................................................................................................................................................GACCTTGCTTCTACTTTACCAGA.................................................2311.002.00-----------------------------------------------------1.00-----------
................................................................................................................................TGGGACAGTAGAGGGAGGAAAA....................................................................................................2211.003.00---------------1.00-------------------------------------------------
................................................................................................................................TGGGACAGTAGAGGGAGGAAGAA...................................................................................................2311.003.00------------------------1.00----------------------------------------
...............................................................AGACAGGGCTGTCCCGTGGC.......................................................................................................................................................................2011.001.00-------------------------------1.00---------------------------------
.......................................................................................GGCTGCGTGGGCTCCGC..................................................................................................................................................171.000.00------------------------------------------1.00----------------------
..............................................................................................................................................................................GAGAGACCTTGCTTCTACTTTACC....................................................2411.001.00-----1.00-----------------------------------------------------------
................................................................................................................................TGGGACAGTAGAGGGAGGAAAAAA..................................................................................................2411.003.00-----1.00-----------------------------------------------------------
.................................................................ACAGGGCTGTCCCGTGGCTGATGGC................................................................................................................................................................2511.001.00-------------------1.00---------------------------------------------
................................................................................................................................TGGGACAGTAGAGGGAAA........................................................................................................181.000.00------------------------1.00----------------------------------------
........................................................................................................................................................................................................................CGGACACCAAGGCCCAAGAGG.............2111.001.00-------------------------------------------1.00---------------------
................................................................................................................................TGGGACAGTAGAGGGAGGAATCG...................................................................................................2311.001.00------------------1.00----------------------------------------------
.............................................................................................................................CACTGGGACAGTAGAGGGAGGA.......................................................................................................2211.001.00--------------------------1.00--------------------------------------
.....................................................................................................................................CAGTAGAGGGAGGAATCGCATA...............................................................................................2211.002.001.00----------------------------------------------------------------
.....................................................................................................................................CAGTAGAGGGAGGAATCGA..................................................................................................1911.001.00---------1.00-------------------------------------------------------
......................................................................................................................................................................................................................GACGGACACCAAGGCCCAAGAGGTGAA.........271.000.00----------------------------------------------------1.00------------
.....................................................................................................................................CAGTAGAGGGAGGAATCGCAGAAT.............................................................................................2411.001.00-----------------------------1.00-----------------------------------
.....................................................................................................................................CAGTAGAGGGAGGAATCGCAGTA..............................................................................................2311.008.001.00----------------------------------------------------------------
..................................................................................................................................................................................GACCTTGCTTCTACTTTACCA...................................................2111.001.00---1.00-------------------------------------------------------------
...............................................................................TGGCTGATGGCTGCGTGGGTG......................................................................................................................................................211.000.00--------------------------------------------------1.00--------------
.....................................................................................................................................CAGTAGAGGGAGGAATCGCCG................................................................................................211.000.00---------------------------------1.00-------------------------------
............................................................................................................................................................................................................................CACCAAGGCCCAAGAG..............1650.600.60--0.60--------------------------------------------------------------
.............................................................................................................................................................................................................GCTGGCCCAGACGGA..............................1520.500.50------------0.50----------------------------------------------------
................................................................................................................................TGGGACAGTAGAGGGAGG........................................................................................................1820.500.50---------------------------------------------------------------0.50-
....................................................................................................................................ACAGTAGAGGGAGGAAT.....................................................................................................1730.330.33-----------------------------------0.33-----------------------------
........................................................................................................................................................................................................................CGGACACCAAGGCCC...................1530.330.33----------------------------------0.33------------------------------

Antisense strand
AAAAGAGACAATTGCTGGTTTAGGAGAAGGGGCAGTGGGAGTACCGTATCCAGAGAGTGTGACAGACAGGGCTGTCCCGTGGCTGATGGCTGCGTGGGCTCCTGGGACACAATGTGCTTCAAGGCCACTGGGACAGTAGAGGGAGGAATCGCAGAAATCACTCCAGGAGCAACTGAGAGACCTTGCTTCTACTTTACCAGGTCCTGCTGGCCCAGACGGACACCAAGGCCCAAGAGGTTGGTCACTCATC
...............................................................................................................................((((...((((((((((((..((.(((...((.......))....))).))..)))).))))))))...))))..................................................
...........................................................................................................................124.........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189786SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR189787
.......................................................................................................................CAAGGCCACTGGGACTGGA................................................................................................................ 191.000.00----------------------------------------1.00------------------------
.............................................................................................................................................................................TGAGAGACCTTGCTTCACC.......................................................... 191.000.00-------------------------------------------------1.00---------------
............................................................................................TCCCAGGAGCCCACG............................................................................................................................................... 1560.670.67--------------------------------------------------------------0.50-0.17
..................................................................................................................................................................TCTCTCAGTTGCTCCTGG...................................................................... 1820.500.50---------------------0.50-------------------------------------------
..........................................................................................................................................................................................CCTGGTAAAGTAGAA................................................. 1570.140.14------------------------------------0.14----------------------------