ID: uc001kuo.1
GENE: NOLC1(2)
chr10:103916782-103916995+


(3)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(4)
AGO2.ip 		(1)
AGO3.ip 		(16)
B-CELL 		(12)
BRAIN 		(14)
BREAST 		(55)
CELL-LINE 		(6)
CERVIX 		(2)
FIBROBLAST 		(8)
HEART 		(5)
HELA 		(1)
KIDNEY 		(8)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(45)
SKIN 		(1)
TESTES 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
CAGGATGCCAATGCCTCTTCCCTCTTAGACATCTATAGCTTCTGGCTCAAGTAAGCCTTTCCTGTTCCATTTTGGCTATTTTCTCCCCCAAGATAGGCTGGGCTGTGTTTCTTGGTTTGGGAAGATTCCAGTCCCCTAGAAATTGGTCCAATCTACCTCAGCAGGTCTGCCAAGGTCCCAGAGCGAAAGTTACAGGCAAATGGACCAGTGGCTA
..........................................................................................((.(((..(((((((.((((((.((.((((((...))))))...)).)))))))))))))..))).))........................................................
....................................................................................85.............................................................................164................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189786SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR390723(GSM850202)
total small RNA. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR029128(GSM416757)
H520. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038862(GSM458545)
MM472. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359177(GSM359177)
hela_nucl_a. (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343335SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040015(GSM532900)
G623T. (cervix)
.........................................................................................AAGATAGGCTGGGCTGTGTTTCT......................................................................................................23178.0078.0013.00--3.001.004.002.003.001.00-3.001.003.001.001.00--2.002.004.004.00---1.00-1.00--2.001.001.00--1.00-1.002.00---1.001.00-1.00--1.001.00---1.00----1.00-1.00-1.00-----------------1.001.00---1.00-------1.00-1.00-----------1.00---1.001.00--1.001.001.00-------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTC.......................................................................................................22155.0055.0012.00-8.002.002.00-2.001.00-2.00--2.00----1.001.00---1.00-----1.001.00-1.00-1.00-----2.00-----2.001.00----2.00-----1.001.00--------1.00---1.00--1.00------------1.00-----------------1.00------------1.001.00--1.00-------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTT........................................................................................................21145.0045.004.00--5.00--1.001.00-3.001.00---1.00-2.00-----1.00---1.00-1.00---1.001.00--1.00-2.00--1.001.00---1.00--2.002.00--1.00--1.00---------1.00--1.00---1.00--1.00----1.00-1.00------------1.00-1.00-1.00------------1.00----------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTT.........................................................................................................20116.0016.00--5.00-1.001.00---------1.00--------2.00-1.00-1.00--1.00----------------1.00-------------------1.00-----------------1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTCAG.....................................................22111.0011.00-8.00---------------------------------2.00---------------------------------------------------------------------------------1.00------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCTTGG...................................................................................................2316.006.00--------4.00------1.00--------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
.......................CTTAGACATCTATAGCTTCTGGC........................................................................................................................................................................2315.005.00---------------------4.00--------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTCTT.....................................................................................................2414.004.004.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTAA......................................................................................................2314.0045.00-------------------------1.00----------------------------------------------1.00----1.00-----------------1.00----------------------------------------------------------------------------------------
........................................................................................CAAGATAGGCTGGGCTGTGTTT........................................................................................................2214.004.00---1.00---------2.00----------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
..........................................................................................AGATAGGCTGGGCTGTGTTTCT......................................................................................................2213.003.002.00-----------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTT.......................................................................................................2213.0045.00----------------------------------------------------------1.00---1.00-1.00-----------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGT..........................................................................................................1913.003.00-------------------------------------------2.00----------1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTA........................................................................................................2113.0016.00----1.00-1.00----------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTA.......................................................................................................2213.0045.00----------1.00------------1.00-------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCTTG....................................................................................................2212.002.00-1.00------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTTT......................................................................................................2312.0045.00-1.00---------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTTATG....................................................................................................2512.0045.00---------------------------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................CAAGATAGGCTGGGCTGTGTTTC.......................................................................................................2312.002.00---1.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................AGGTCCCAGAGCGAAAGTT.......................1912.002.00-------------------------------------------------------1.00--------------------------1.00-----------------------------------------------------------------------------------------------------
..........................................................................................AGATAGGCTGGGCTGTGTTT........................................................................................................2012.002.00-----------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTAA.......................................................................................................2212.0016.00-------1.00-------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
..........ATGCCTCTTCCCTCTTAGACATCTACAGC...............................................................................................................................................................................291.000.00-------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................TCTGCCAAGGTCCCAGAGCGA............................2111.001.00-----------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
...........................................................................................GATAGGCTGGGCTGTGTTTCT......................................................................................................2111.001.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................AGACATCTATAGCTTCTG..........................................................................................................................................................................1811.001.00------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................CCAAGGTCCCAGAGCGAAAGTTACAG...................2611.001.00-----------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTCAA.....................................................2211.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................AGTTACAGGCAAATGGACCAGTGGC..2511.001.00--------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGT............................................................................................................1711.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTCA......................................................2111.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTAAG.....................................................221.000.00-------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCCTGG...................................................................................................2311.001.00-----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTAA........................................................................................................2111.003.00-------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTAT......................................................................................................2311.0045.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................GATAGGCTGGGCTGTGTTTCTTG....................................................................................................2311.001.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCTTGGA..................................................................................................2411.006.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTAATG....................................................................................................2511.0045.00---------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CCAGAGCGAAAGTTACAGGCA................2111.001.00-------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
........................TTAGACATCTATAGCTTCTGGCTCAA....................................................................................................................................................................2611.001.00-------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
.......................................................................................CCAAGATAGGCTGGGCTGTGTTTC.......................................................................................................2411.001.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................GATAGGCTGGGCTGTGTTTCTT.....................................................................................................2211.001.00-------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
......................................................................................................................................................................CTGCCAAGGTCCCAGAGCGAAAGTTACAGGCAAATG............3611.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGGTT........................................................................................................211.000.00----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCTCAGA....................................................2311.0011.00-----------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTCTAA....................................................................................................2511.0078.00------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TACAGGCAAATGGACCAGTGGCT.2311.001.00----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTT........................................................................................................1811.001.00----------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
............................ACATCTATAGCTTCTGGCTCAACAG.................................................................................................................................................................251.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................AGATAGGCTGGGCTGTGTTTC.......................................................................................................2111.001.00--------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CAGAGCGAAAGTTACAGGC.................1911.001.00----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................CAAATGGACCAGTGGCTA1811.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................CAAGATAGGCTGGGCTGTGTCTC.......................................................................................................231.000.00-----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................TAGAAATTGGTCCAATCTACCT........................................................2211.001.00---------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------
..........................AGACATCTATAGCTTCTGGCTCAAGTAA................................................................................................................................................................2811.001.00----------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
...................................................................................................................................................................................................GCAAATGGACCAGTGGCT.1811.001.00--------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTCTTGGT..................................................................................................2411.001.00----------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACCAGTGGCTA2911.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAATTGGTCCAATCTACCACAC.....................................................221.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTAG......................................................................................................2011.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGGGTT.........................................................................................................201.000.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................AGATAGGCTGGGCTGTGTTTA.......................................................................................................2111.002.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGGGT..........................................................................................................191.000.00------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
.........................................................................................AAGATAGGCTGGGCTGTGTTTCC......................................................................................................2311.0055.00-----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................CTATAGCTTCTGGCTCAAGTCTGC..............................................................................................................................................................241.000.00-------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATAGGCTGGGCTGTGTTTC.......................................................................................................1911.001.00-----------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACC........2120.500.50-0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................AGTTACAGGCAAATGGACC........1920.500.50----------------------------------------------------------------------------------------------------------------------------0.50-----------------------------------------------------------
.....................................................................................................................................................................................AGCGAAAGTTACAGGCAAATGGACCA.......2620.500.50----------------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACCA.......2220.500.50--------------------------------0.50-------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GGCAAATGGACCAGTGGC..1820.500.50-----------------------------------------------------------0.50----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACCAGTG....2520.500.50-------------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CAATCTACCTCAGCAG..................................................1620.500.50---------------------------------0.50------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AAAGTTACAGGCAAATGGACCAG......2320.500.50-0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
CAGGATGCCAATGCCTCTTCCCTCTTAGACATCTATAGCTTCTGGCTCAAGTAAGCCTTTCCTGTTCCATTTTGGCTATTTTCTCCCCCAAGATAGGCTGGGCTGTGTTTCTTGGTTTGGGAAGATTCCAGTCCCCTAGAAATTGGTCCAATCTACCTCAGCAGGTCTGCCAAGGTCCCAGAGCGAAAGTTACAGGCAAATGGACCAGTGGCTA
..........................................................................................((.(((..(((((((.((((((.((.((((((...))))))...)).)))))))))))))..))).))........................................................
....................................................................................85.............................................................................164................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189786SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR390723(GSM850202)
total small RNA. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR029128(GSM416757)
H520. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038862(GSM458545)
MM472. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359177(GSM359177)
hela_nucl_a. (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343335SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040015(GSM532900)
G623T. (cervix)
.AGGATGCCAATGCCTAAG................................................................................................................................................................................................... 1814.170.00--------------0.17--------0.330.17---------0.33--------------------------0.330.331.330.17-0.17---1.00--0.17-------------------------------------------------0.83--0.500.170.330.500.50--0.170.330.500.170.33-0.170.33-0.33-0.170.17-0.170.330.17-0.170.170.17-0.17--0.170.17-0.170.17-0.170.170.170.170.17-0.170.17--0.170.17-0.17--0.17-0.170.17
.AGGCATTGGCATCCT...................................................................................................................................................................................................... 1565.505.50------------------------------------------------------------0.17----0.17-0.17--0.170.17--------------------------------------------------------0.17--0.330.330.330.17---0.33--0.33--0.170.170.330.17-0.17----0.17-0.17---0.17--0.17-----0.17--0.170.17--0.17-0.170.17----
.AGGATGCCAATGCCTAAGC.................................................................................................................................................................................................. 192.000.00------------------------------------------------------------0.17--------0.17--0.17---------------------------------------------------0.17-0.170.330.17---0.17---0.33--0.17--------------------------------------------
.................................................................................................................................................GTCCAATCTACCTCAAGTT.................................................. 192.000.00----------------------------------------2.00-----------------------------------------------------------------------------------------------------------------------------------------------
.AGGATGCCAATGCCTAA.................................................................................................................................................................................................... 171.170.00--------------------------------------------------------------------0.17----------------------------------------------------------0.17-0.17-0.17-----------0.33-------------0.17--------------------------
..............................................................TGTTCCATTTTGGCTAAT...................................................................................................................................... 181.000.00---------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
....................................................................................................................................................CAATCTACCTCAGCAAAA................................................ 181.000.00------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CAATCTACCTCAGCATA................................................. 171.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GGTCCAATCTACCTCAGCT................................................... 191.000.00-----------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................CCTTGGCAGACCTGC....................................... 1530.670.67-----------------------------------------------------------------------------------------------------------------------------0.67----------------------------------------------------------
.................................TGAGCCAGAAGCTATA..................................................................................................................................................................... 1640.250.25------------------------------------------------------------------------------------------------------------------------------------------------------0.25---------------------------------
.AGGATGCCAATGCCTAATA.................................................................................................................................................................................................. 190.170.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.17--