ID: uc001ksp.8
GENE: SFXN3(9)
chr10:102798200-102798449+


(1)
AGO1.ip 		(2)
AGO2.ip 		(2)
AGO3.ip 		(3)
B-CELL 		(4)
BRAIN 		(7)
BREAST 		(30)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(6)
HELA 		(1)
KIDNEY 		(3)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(48)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGATCAGCAGACAGGCCTGGCTGGAGTGGAAGGGCGTGATCTGGAGGTCCCAGCCCTGTCATTGCCTTGGGAGAAAGAAAACGGCCACAGGTCTAAGGGCTCCAAGGCAAGGCTGATGGGATAGAGCTATGGTGGGTGAAATGGGGTGACAGTGAGGCAGGGGACACAAGCCGTTCCATTGTCTTTCTGTCTCTCCACAGCGCCGCCCCTGGCTGGGGGCACCCCTGCAGGTGGGACTGGTGGGCTTCTG
.............................................................................................................................................(((((.(((((.((((((((((((.......))))).))))))).))))).))))).....................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038853(GSM458536)
MELB. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189785SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532873(GSM532873)
G699N. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCACA...................................................22131.0031.003.0010.00-1.00--1.00--1.00-----1.00---------1.00---------1.00--------1.00--------2.00-1.001.00-1.00------------------1.00--------1.00----------1.00-1.001.00------1.00------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCCACAG..................................................22117.0017.003.00-1.001.00---1.001.00--1.00-2.00-------2.00------1.00----------------1.00--------2.00------------------------------------1.00----------------------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCACA...................................................23115.0015.001.00--1.001.00-2.00-----1.00--1.00------1.00-1.00--------------2.00-------------------------1.00----------------1.00-----------1.00-----------1.00-------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCCACAGA.................................................23112.0017.001.00------1.00----1.00-----1.001.00----------------1.00-------------1.002.00-------1.00---------------------1.00-----------------------1.00--------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCACT...................................................23110.004.001.00---2.00----1.00--------------------------1.00------1.00--------2.00----------1.00---------1.00----------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCACAG..................................................2319.009.002.00-----------1.00-1.00----1.00----1.00----------------2.00--------------------------1.00---------------------------------------------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCCACA...................................................2118.008.00-----------1.00-----------------------1.00------1.00-1.00-1.00---------------1.00-1.00------------------------------1.00------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCACT...................................................2216.003.00---------1.00-------3.00----1.00-----------------------------------------------1.00-------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCACAGT.................................................2416.009.00-----2.00----1.00---------1.00----------------------------------1.00------------------------------------------------------1.00---
...................................................................................................................................................................................TGTCTTTCTGTCTCTCCACAGA.................................................2215.001.00------------------------------1.00------2.00------------------1.00---------------1.00-----------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAG..........................................................................................2115.005.00---1.00-3.00-----------------------------------------1.00------------------------------------------------------------------
.................................................................................................................................................................................................................................TGCAGGTGGGACTGGTGGGCTTCTG2514.004.00-------2.00--------------------------------------------------------------------------------1.00-------1.00-----------------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCAC....................................................2214.004.00----------1.00--------1.00----------------------1.00-----------------------------------1.00-----------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCA.....................................................2014.004.00--------1.00---------1.00----------1.00---------------------------------------------1.00--------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAGG.........................................................................................2214.004.00--------------------------------1.002.00---------------------------------------------------------------------1.00----------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCACAG..................................................2414.004.001.00--2.00----------1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCATT...................................................2314.003.00------2.00----------------1.00---------------------1.00--------------------------------------------------------------------
...................................................................................................................................................................................TGTCTTTCTGTCTCTCCACAGT.................................................2213.001.001.00-----------------------------------------------------------------1.00----------------------------------1.00------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCAC....................................................2113.003.00-----------------------1.00-------------------1.00--1.00-------------------------------------------------------------------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCCACAGT.................................................2313.0017.00---1.00-1.00-------------------1.00----------------------------------------------------------------------------------------
.............................................................................................................................................TGGGGTGACAGTGAGGCAG..........................................................................................1913.003.00----------1.00------------------------------------------------------------------------------1.001.00-----------------------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCCAC....................................................2013.003.00-----------1.00------------------1.00------------------------------1.00----------------------------------------------------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCA.....................................................2113.003.00--------------------------------1.00----------------2.00----------------------------------------------------------------
................................................................................................................................................................................................................................CTGCAGGTGGGACTGGTGGGCTTC..2412.002.00--2.00---------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................GCAGGTGGGACTGGTGGGCTTCTGC252.000.00--2.00---------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCAT....................................................2212.003.00----1.00-------------------------------------------------------------------------------------------------1.00-----------
...........................................................................................................................................AATGGGGTGACAGTGAGGCA...........................................................................................2012.002.00--------1.00------------------------------------------------------------1.00--------------------------------------------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCCAGA...................................................212.000.00---------------------------2.00--------------------------------------------------------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAA..........................................................................................2112.002.00----------------------------------2.00-------------------------------------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCATT...................................................2212.004.00-------------------------1.00----------------------------------1.00-----------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCACAGA.................................................2412.009.00--1.00----------------------------1.00----------------------------------------------------------------------------------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCCACTAA.................................................2311.003.00-------------------------------1.00----------------------------------------------------------------------------------
......................................................................................................................................................AGTGAGGCAGGGGACACAGCCC..............................................................................221.000.00-------------------------------------------------------------------------------------1.00----------------------------
................CTGGCTGGAGTGGAAGGCCG......................................................................................................................................................................................................................201.000.00----1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCACAGT.................................................2511.004.00---------------1.00--------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GGGACTGGTGGGCTTCTGCCT211.000.00--------1.00---------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCACAAAA................................................2511.0031.00--------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................CCATTGTCTTTCTGTCTCTCCACAG..................................................2511.001.00--1.00---------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAGGTATT.....................................................................................2611.004.00--------------------1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GGTGGGACTGGTGGGGT....171.000.00-----------------------------------------------1.00------------------------------------------------------------------
...................................................................................................................................................................................TGTCTTTCTGTCTCTCCACAG..................................................2111.001.00-----------1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CGTTCCATTGTCTTTCTGTCTCTCCACAGC.................................................3011.001.00------------------------------------------------------------------------------------------------------------1.00-----
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCACC...................................................2311.004.00----------1.00-------------------------------------------------------------------------------------------------------
...............................................................................AACGGCCACAGGTCTC...........................................................................................................................................................161.000.00--------------------------------------------------------------------------1.00---------------------------------------
...............................................................................................................................................................................................................................CCTGCAGGTGGGACTGGTGGGC.....2211.001.001.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CCGCCCCTGGCTGGGCGCC.............................191.000.00----------------------1.00-------------------------------------------------------------------------------------------
................................................................CCTTGGGAGAAAGAAAACGGC.....................................................................................................................................................................2111.001.00--------------------------------------1.00---------------------------------------------------------------------------
......................................................................................................................................................................................................................................GTGGGACTGGTGGGCATGT.191.000.00-----------------------------------------------------------------------------------1.00------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGC............................................................................................1911.001.00---------------------------------------------------------1.00--------------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCTT....................................................211.000.00--------------------------------------------------------------------------------1.00---------------------------------
.............................................................................................................................................TGGGGTGACAGTGAGGCAGGGGAA.....................................................................................241.000.00------------------1.00-----------------------------------------------------------------------------------------------
......................................................................GAGAAAGAAAACGGCCAAA.................................................................................................................................................................191.000.00-------------------------------------------------------------------------------1.00----------------------------------
...................................................AGCCCTGTCATTGCCTTGGGAGAAAG.............................................................................................................................................................................2611.001.00-------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GTGGGACTGGTGGGCATG..181.000.00-------------------------------------------------------------------------------------------------------------1.00----
...........................................................................................................................................AATGGGGTGACAGTGAGGCAT..........................................................................................2111.002.00--------------------------------------------------1.00---------------------------------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAAT.........................................................................................2211.002.00--------------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCATTA..................................................2311.004.00----------------1.00-------------------------------------------------------------------------------------------------
.............GGCCTGGCTGGAGTGGAAGGGCGTGAT..................................................................................................................................................................................................................2711.001.00----------------------------------------------------------------------------1.00-------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAGGAA.......................................................................................2411.004.00-----------------------1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GTGGGACTGGTGGGCATT..181.000.00--------------------------------------------------------------------------------------------------------1.00---------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCCACAGTT................................................2411.0017.00----------------1.00-------------------------------------------------------------------------------------------------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCAGA...................................................2311.003.00----------------1.00-------------------------------------------------------------------------------------------------
....................CTGGAGTGGAAGGGCGTGAT..................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------1.00--------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAGGTAT......................................................................................2511.004.00--------------------------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GGGACTGGTGGGCTTCTGC191.000.00-----------------------------------------------------------------------1.00------------------------------------------
...........................................................................................................................................................................................................................CACCCCTGCAGGTGGGACTGGTGGGCTTCTGC321.000.001.00-----------------------------------------------------------------------------------------------------------------
...........................................................CATTGCCTTGGGAGAAAGAAAACGGC.....................................................................................................................................................................2611.001.00----------------------------------------1.00-------------------------------------------------------------------------
..........................................................................................................GCAAGGCTGATGGGATGAAG............................................................................................................................201.000.00------------------------------------------------------------------------------------1.00-----------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCTTT...................................................221.000.00--------------------------------------1.00---------------------------------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCAT....................................................2111.004.00---------1.00--------------------------------------------------------------------------------------------------------
.......................................................................................CAGGTCTAAGGGCTCCAAGGCAAG...........................................................................................................................................2411.001.001.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCAAG....................................................201.000.00----------------------------------------1.00-------------------------------------------------------------------------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCAAT...................................................2311.003.00------------------------1.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCACAA..................................................2311.0031.00--------------------------------------------------------------------------------------------------1.00---------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAGGA........................................................................................2311.004.00--------------------------------------------------------------------------------------------1.00---------------------
................................................................................................................................................................................CATTGTCTTTCTGTCTCTCCATGA..................................................2411.003.00-----------------------------1.00------------------------------------------------------------------------------------
.................................................................CTTGGGAGAAAGAAAACGGC.....................................................................................................................................................................2011.001.00----1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAGGATT......................................................................................2511.004.00--------------1.00---------------------------------------------------------------------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAGTAT.......................................................................................2411.005.00----------------------------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAGGCAGAA........................................................................................2311.005.00--------------------------1.00---------------------------------------------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCCAAT...................................................2211.004.00-------------------------------------------------------------------1.00----------------------------------------------
..................................................................................................................................................................................TTGTCTTTCTGTCTCTCCACCG..................................................2211.003.00---------------------1.00--------------------------------------------------------------------------------------------
...........................................................................................................................................AATGGGGTGACAGTGAG..............................................................................................1750.800.80---------------------------------------------------------------------------------------------------------------0.80--
........................AGTGGAAGGGCGTGAT..................................................................................................................................................................................................................1620.500.50----------------------------------------------------------------------------------------------------------------0.50-
...........................................................................................................................................AATGGGGTGACAGTGAGG.............................................................................................1820.500.50---------------------------------------------------------0.50--------------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTCGACA...................................................2240.250.25----------------------------0.25-------------------------------------------------------------------------------------
.................................................................................................................................................................................ATTGTCTTTCTGTCTCTC.......................................................1840.250.25---------------------------0.25--------------------------------------------------------------------------------------
........................................................................................AGGTCTAAGGGCTCC...................................................................................................................................................1540.250.25----0.25-------------------------------------------------------------------------------------------------------------
.........................GTGGAAGGGCGTGAT..................................................................................................................................................................................................................1550.200.20-----------------------------------------------------------------------------------------------------------------0.20

Antisense strand
TGATCAGCAGACAGGCCTGGCTGGAGTGGAAGGGCGTGATCTGGAGGTCCCAGCCCTGTCATTGCCTTGGGAGAAAGAAAACGGCCACAGGTCTAAGGGCTCCAAGGCAAGGCTGATGGGATAGAGCTATGGTGGGTGAAATGGGGTGACAGTGAGGCAGGGGACACAAGCCGTTCCATTGTCTTTCTGTCTCTCCACAGCGCCGCCCCTGGCTGGGGGCACCCCTGCAGGTGGGACTGGTGGGCTTCTG
.............................................................................................................................................(((((.(((((.((((((((((((.......))))).))))))).))))).))))).....................................................
......................................................................................................................................135..............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038853(GSM458536)
MELB. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029129(GSM416758)
SW480. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189785SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532873(GSM532873)
G699N. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
........................................................................GAAAGAAAACGGCCACAGGTCTCCCC........................................................................................................................................................ 262.000.00------------------------------------------------2.00-----------------------------------------------------------------
......................................................................................................................................................................AAGACAATGGAACGGCTTG................................................................. 1911.001.00--1.00---------------------------------------------------------------------------------------------------------------
.....................TGGAGTGGAAGGGCGTCA................................................................................................................................................................................................................... 181.000.00---------------------------------------------------------------------------------------------1.00--------------------