ID: uc001ksc.2_intron_0_0_chr10_102746330_r
GENE: (3)
chr10:102746280-102746555-


(1)
AGO2.ip 		(1)
B-CELL 		(1)
BRAIN 		(4)
BREAST 		(8)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(2)
HELA 		(4)
LIVER 		(1)
OTHER 		(14)
SKIN 		(1)
TESTES

Sense strand
CGTTCCGCGGGCTACGCCCCCGAGAGGTTCAGGATCCTGCCCCAGCCCAGGTGCAAGCACAGTGAAGAGTTGCCCCACCAACTGCAGCCCCAGGCTTTGGACTGTTACTCCGGTAAAGGTGGTTCTTCCCCTTTGGGATTCCAAGCCCAGGCAAATGGAACCCATCAATGGGCAAGTTGACAGAGGTTCTGCTTGGGATAATGAAGAGCTGCCTGTTTCTTTCCAGTGCCTGCTTCTGGGGGCAGTGACCTTGTGAACCACTCATTTTTATGCAAG
..........................................................................................(((((((((.(((.((((....)))).)))....(((.(((..((((.(((((.((....))...))))))))).....))).)))....)))))..)))).....................................................................................
.........................................................................................90......................................................................................................194................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................................CTTTGGACTGTTACTCCGG...................................................................................................................................................................1918.008.00-8.00-----------------------------------------
.........................................................................................................................................................................GGGCAAGTTGACAGAGGTTCT......................................................................................2113.003.00-----3.00-------------------------------------
........................................CCCAGCCCAGGTGCAAGCACAGTGAAGA................................................................................................................................................................................................................2812.002.00-------2.00-----------------------------------
........................................................................................................................................................................................................................TTCTTTCCAGTGCCTGCTTCTGG.....................................2312.002.00----------2.00--------------------------------
................................................................................................................................................................................................................................................GGCAGTGACCTTGTGAACCAC...............2112.002.00---2.00---------------------------------------
................................................................................................TTGGACTGTTACTCCGGTAAAGGTGG..........................................................................................................................................................2612.002.002.00------------------------------------------
...........................................................................................AGGCTTTGGACTGTTACTCCGG...................................................................................................................................................................2211.001.00---------1.00---------------------------------
..................................................................................................................................................................................................................................................CAGTGACCTTGTGAACCAC...............1911.001.00-------------------1.00-----------------------
........................................................................................................................................................................................................ATGAAGAGCTGCCTGGCG..........................................................181.000.00----------------------------1.00--------------
..............................................................................................................................................................................AGTTGACAGAGGTTCTGCTTGGGAT.............................................................................2511.001.00--1.00----------------------------------------
.....................................................................TTGCCCCACCAACTGCAGCCCCAGGCC....................................................................................................................................................................................2711.001.00--1.00----------------------------------------
............................................................................................................................................................................................................AGAGCTGCCTGTTTCTTTCCAGTGCC..............................................2611.001.00-----------------------1.00-------------------
...........................................................CAGTGAAGAGTTGCCCC........................................................................................................................................................................................................1711.001.00------------1.00------------------------------
...............................................................................................TTTGGACTGTTACTCCGGTAAAGGTG...........................................................................................................................................................2611.001.001.00------------------------------------------
.......................................................................................................................................................................................................AATGAAGAGCTGCCTGTTT..........................................................1911.001.00-----------------1.00-------------------------
.......................................................AGCACAGTGAAGAGTTGCCCCACCAAC..................................................................................................................................................................................................2711.001.00---1.00---------------------------------------
....................................................GCAAGCACAGTGAAGAGTTGCC..........................................................................................................................................................................................................2211.001.00------1.00------------------------------------
......................................................................................................................................................................................GAGGTTCTGCTTGGGATAATG.........................................................................2111.001.00------1.00------------------------------------
..................................TCCTGCCCCAGCCCAGGTGCAAGCA.........................................................................................................................................................................................................................2511.001.00----------------------------------------1.00--
.................................................................................................................................................................................................TGGGATAATGAAGAGCTGCCTGTTT..........................................................2511.001.001.00------------------------------------------
...................................................................................................................................................................................ACAGAGGTTCTGCTTGA................................................................................171.000.00-------------------------------1.00-----------
.................................................................................................TGGACTGTTACTCCGGTAAAGGTGGTT........................................................................................................................................................2711.001.001.00------------------------------------------
................................................................................................................................................................................................TTGGGATAATGAAGAGCTGCCTGTTT..........................................................2611.001.001.00------------------------------------------
..................................................................................................................................................................................................GGGATAATGAAGAGCTGCCTGTTT..........................................................2411.001.00-----------------------------------1.00-------
.................................................................................................TGGACTGTTACTCCGGTAAAG..............................................................................................................................................................2111.001.00--------1.00----------------------------------
.......................................CCCCAGCCCAGGTGCAAGC..........................................................................................................................................................................................................................1911.001.00---------------------1.00---------------------
..........................................................................................................................................................................................................................................TCTGGGGGCAGTGACCTTGTGAACCACCC.............291.000.00--1.00----------------------------------------
...........................................................................................AGGCTTTGGACTGTTACTCCGGTAAAG..............................................................................................................................................................2711.001.001.00------------------------------------------
.....................................................................................................................................................................................................................................................TGACCTTGTGAACCACTCATTTTTATGC...2811.001.001.00------------------------------------------
.......................................................................................................................................................................ATGGGCAAGTTGACAGAGGTTCTGCT...................................................................................2611.001.00---1.00---------------------------------------
.....................................................CAAGCACAGTGAAGAGTTG............................................................................................................................................................................................................1911.001.00---1.00---------------------------------------
...................CCGAGAGGTTCAGGATCCTGCCC..........................................................................................................................................................................................................................................2311.001.00----1.00--------------------------------------
.............................................................................................................................................................................................TGCTTGGGATAATGAAG......................................................................1711.001.001.00------------------------------------------
................CCCCCGAGAGGTTCAGGATCCTGC............................................................................................................................................................................................................................................2411.001.00---------------1.00---------------------------
..........................................................................................................................................................................................................................................TCTGGGGGCAGTGACCTTGTGAACCACTC.............2911.001.00--------------------1.00----------------------
........................................................................................................................................................................TGGGCAAGTTGACAGAGGTTCTGC....................................................................................2411.001.00----------------1.00--------------------------
.................................................................................................TGGACTGTTACTCCGGTAAAGGTGGT.........................................................................................................................................................2611.001.001.00------------------------------------------
......................................................................................GCCCCAGGCTTTGGACTG............................................................................................................................................................................1811.001.00----1.00--------------------------------------
................................................................................................TTGGACTGTTACTCCGGTAAAGGTGGT.........................................................................................................................................................2711.001.001.00------------------------------------------
............................TCAGGATCCTGCCCCAGCCCAGGCGC..............................................................................................................................................................................................................................261.000.00--1.00----------------------------------------
..TTCCGCGGGCTACGCCCCCGAGAGG.........................................................................................................................................................................................................................................................2511.001.00---------1.00---------------------------------
...................................................................................................................................................................................ACAGAGGTTCTGCTTGGGATAACG.........................................................................241.000.00--------------------------------1.00----------
...............................................................................................TTTGGACTGTTACTCCGGTAAAG..............................................................................................................................................................2311.001.00------------------------------------1.00------
..............................................................................................................................................................................AGTTGACAGAGGTTCTGCTTGGG...............................................................................2311.001.00--1.00----------------------------------------
....................................................................................................................................................................................CAGAGGTTCTGCTTGGGATAATGAAGAGCT..................................................................3011.001.00--------------------------------------1.00----
................................................................................................TTGGACTGTTACTCCGGTAAAGGTGT..........................................................................................................................................................261.000.001.00------------------------------------------
.......................................................................................................................................................................ATGGGCAAGTTGACAGAGGTTCT......................................................................................2311.001.00----1.00--------------------------------------
.................................................................................................................................................................................................TGGGATAATGAAGAGCTG.................................................................1811.001.00-------------------------------------1.00-----
..................................................................................................................................................................................................................................................CAGTGACCTTGTGAACC.................1711.001.00---------------------------------------1.00---
.....................................................................TTGCCCCACCAACTGCAGCCCCAGGC.....................................................................................................................................................................................2611.001.001.00------------------------------------------
..............................................................................................CTTTGGACTGTTACTCCG....................................................................................................................................................................1811.001.00--------1.00----------------------------------
..............................................................................................................................................AAGCCCAGGCAAATGGAACCCAT...............................................................................................................2311.001.00----------------------------------1.00--------
................................................................................................................................................................CCCATCAATGGGCAAGTTGACAGAGGTT........................................................................................2811.001.00---------------------------------1.00---------
..............................................................................CAACTGCAGCCCCAGGCTTTGGA...............................................................................................................................................................................2311.001.00------1.00------------------------------------
......................AGAGGTTCAGGATCCTGCCCCAGCC.....................................................................................................................................................................................................................................2511.001.00----1.00--------------------------------------
........................................................................................................................................................................TGGGCAAGTTGACAGAGG..........................................................................................1811.001.00------------------1.00------------------------
........................................CCCAGCCCAGGTGCAAGCCCA.......................................................................................................................................................................................................................211.000.00----------------------1.00--------------------
...........................................................CAGTGAAGAGTTGCCCCACCAACTGC...............................................................................................................................................................................................2611.001.001.00------------------------------------------

Antisense strand
CGTTCCGCGGGCTACGCCCCCGAGAGGTTCAGGATCCTGCCCCAGCCCAGGTGCAAGCACAGTGAAGAGTTGCCCCACCAACTGCAGCCCCAGGCTTTGGACTGTTACTCCGGTAAAGGTGGTTCTTCCCCTTTGGGATTCCAAGCCCAGGCAAATGGAACCCATCAATGGGCAAGTTGACAGAGGTTCTGCTTGGGATAATGAAGAGCTGCCTGTTTCTTTCCAGTGCCTGCTTCTGGGGGCAGTGACCTTGTGAACCACTCATTTTTATGCAAG
..........................................................................................(((((((((.(((.((((....)))).)))....(((.(((..((((.(((((.((....))...))))))))).....))).)))....)))))..)))).....................................................................................
.........................................................................................90......................................................................................................194................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................................................................................................................................CAGAGGTTCTGCTTGGAA.............................................................................. 182.000.00--------------1.00------------1.00---------------
..........................................................................CCACCAACTGCAGCCCCA........................................................................................................................................................................................ 181.000.00-----------1.00-------------------------------
................................................................................................................................................................................ATCCCAAGCAGAACCTCTGTCAA............................................................................. 2311.001.00------------------------------1.00------------
.................................................GGTGCAAGCACAGTGGCA................................................................................................................................................................................................................. 181.000.00------------------------1.00------------------
............................................................................................................................................................................................................................................CAAGGTCACTGCCCCCA....................... 1711.001.00-----------------------------1.00-------------
.............................................CCCAGGTGCAAGCACAGGGA................................................................................................................................................................................................................... 201.000.00--------------------------1.00----------------
.......................................................................................................................................................................................................................................CACAAGGTCACTGCCCCCAGAAGC..................... 2411.001.00-------------------------1.00-----------------
.................................ATCCTGCCCCAGCCCATTTG............................................................................................................................................................................................................................... 201.000.00-----------1.00-------------------------------
....CCGCGGGCTACGCCCCCG.............................................................................................................................................................................................................................................................. 181.000.00-------------1.00-----------------------------
.............................................................................................................................................................................................................................................................AAAAATGAGTGGTTCA....... 1670.140.14-----------------------------------------0.14-
....................................................................................................................................................................................CAAGCAGAACCTCTG................................................................................. 1570.140.14------------------------------------------0.14