ID: uc001kot.1_intron_8_0_chr10_99667905_r.3p
GENE: (3)
chr10:99667855-99668104-


(1)
AGO2.ip
(3)
BREAST
(2)
CELL-LINE
(11)
CERVIX
(2)
HEART
(2)
OTHER
(12)
SKIN

Sense strand
AGTGTTGTTACCTTCCACACAGATTCATGGAGACCATGAGCCCAGATTTAGGCTCAGGAAAGCACGGGAAGCAGAATTCCCCCCAGGCTCCTCTGAGGAGCCTCTGCTGCAGTTCCCCTCAGGCCTCAGAGGCAGCCCTGTCCTCCAGGTGGGCCTGGGGCTTGCTTCTGCCACTCACTGTGGGTCGATGTCTTTTCTAGGGGGCCGAGGCGTCAGCGTGGGCCCCATCCTCAGCAGCAGTGCCTCGGAT
.................................................................(((((((((..........(((((((.....)))))))...))))..)))))..(((((((..((((((....)).)))).....))))))).............................................................................................
.............................................................62.............................................................................................157...........................................................................................
SizePerfect hitTotal NormPerfect NormSRR040036(GSM532921)
G243N. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR040039(GSM532924)
G531T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR040034(GSM532919)
G001N. (cervix)
SRR040040(GSM532925)
G612N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343336SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343337
......................................................................................................................................GCCCTGTCCTCCAGGAGCT.................................................................................................19129.000.0039.0029.0024.0017.0010.003.00----2.00----1.00---1.00-----1.00-1.001.00---
......................................................................................................................................GCCCTGTCCTCCAGGTGCTCA...............................................................................................213.000.00--1.00-----------------1.00-----1.00-----
..................................................................GGAAGCAGAATTCCCCA.......................................................................................................................................................................173.000.00-------2.00-----------------------1.00
......................................................................................................................................GCCCTGTCCTCCAGGAGAT.................................................................................................192.000.001.00-1.00-----------------------------
...................................................................GAAGCAGAATTCCCCACG.....................................................................................................................................................................181.000.00-----------------1.00--------------
......................................................................................................................................GCCCTGTCCTCCAGGAGAA.................................................................................................191.000.001.00-------------------------------
.................................................................GGGAAGCAGAATTCCCC........................................................................................................................................................................1711.001.00-------1.00------------------------
......................................................................................................................................GCCCTGTCCTCCAGGAGCG.................................................................................................191.000.00----1.00---------------------------
......................................................................................................................................GCCCTGTCCTCCAGGTGCTAA...............................................................................................211.000.00---------1.00----------------------
......................................................................................................................................GCCCTGTCCTCCAGGAGCA.................................................................................................191.000.001.00-------------------------------

Antisense strand
AGTGTTGTTACCTTCCACACAGATTCATGGAGACCATGAGCCCAGATTTAGGCTCAGGAAAGCACGGGAAGCAGAATTCCCCCCAGGCTCCTCTGAGGAGCCTCTGCTGCAGTTCCCCTCAGGCCTCAGAGGCAGCCCTGTCCTCCAGGTGGGCCTGGGGCTTGCTTCTGCCACTCACTGTGGGTCGATGTCTTTTCTAGGGGGCCGAGGCGTCAGCGTGGGCCCCATCCTCAGCAGCAGTGCCTCGGAT
.................................................................(((((((((..........(((((((.....)))))))...))))..)))))..(((((((..((((((....)).)))).....))))))).............................................................................................
.............................................................62.............................................................................................157...........................................................................................
SizePerfect hitTotal NormPerfect NormSRR040036(GSM532921)
G243N. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR040039(GSM532924)
G531T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR040034(GSM532919)
G001N. (cervix)
SRR040040(GSM532925)
G612N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343336SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343337
...................................................................GAAGCAGAATTCCCCAC...................................................................................................................................................................... 176.000.00--------2.00---1.001.001.00-------1.00---------
...................................................................GAAGCAGAATTCCCCACAA.................................................................................................................................................................... 196.000.00------2.00----1.00----1.00-1.00-----1.00-------
...................................................................GAAGCAGAATTCCCCCAC..................................................................................................................................................................... 183.000.00------1.00--------------1.00--------1.00-
..........................................................................................................................................................................................................GGCCGAGGCGTCAGCGGG.............................. 181.000.00-----------------------1.00--------
...................................................................GAAGCAGAATTCCCCCA...................................................................................................................................................................... 171.000.00-----------1.00--------------------
.....................................................................................................................................AGCCCTGTCCTCCAGATGA.................................................................................................. 191.000.00---------1.00----------------------
....................................................................................................................................................................................................CTAGGGGGCCGAGGCC...................................... 161.000.00-----------------------------1.00--