ID: uc001kng.1_intron_2_0_chr10_99185497_r
GENE: LOC644215(1)
chr10:99185447-99185829-


(6)
AGO2.ip
(8)
B-CELL
(1)
BRAIN
(10)
BREAST
(27)
CELL-LINE
(7)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(2)
HELA
(1)
KIDNEY
(6)
LIVER
(2)
OTHER
(41)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
GCGTCCTCCCTCTCCAGTCCCGCGTCGGTCGCCGCAGTCACGGAGCGCACGTAAGCACGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGCGGGCGGCGGGCGGCGGGTTGTGGGGGCGGCCCCAATTCGCTGGCTGCCGCGCTGCTCCGGAGCAGCTCGGCCAGATTAAGTGGCCCTTATCACTGGAACCGCTCCCATCCCCACGCAGAGATTGATTCACGGACCTGTGTTCGAGTCTTCACTCGTACATTCTACTTGCTTTGTGTCTTTGGGCAGGTCGGGAAACCTCTCAGCCTCATCTGTAAAATGTGATCATAAATACCGGG
.........................................................................................................................................((((((.((((((((((((.((((((((((.(((.....))))))))))))).)))))))((((((....))))))..(((((.......))))).............)))))))).)))..((((((................))))))................................................................................................
.........................................................................................................................................138...................................................................................................................................................288.............................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189782SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577589(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
GSM956925PAZD5GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGCGGGGCGG.......................................................................................................................................................................................................................27041.001.0024.00-1.00----------------3.00---2.00--1.002.00----1.00------------1.00------1.00-1.00-1.00-----------1.00----------1.00---1.00----------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGGC..............................................................................................................................................................................................................................19020.0020.00---10.009.00-------1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGCGGGGCG........................................................................................................................................................................................................................26015.001.009.00-2.00----------------1.00-----1.00----------------1.001.00--------------------------------------------------------------------
........................................................................................................................................................................................................................................................................GAGATTGATTCACGGACCTG...................................................................................................20115.0015.00-8.00---6.00------------------------------------------------------------1.00---------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGCGGGGGGG.......................................................................................................................................................................................................................27011.001.007.00--1.00------------------1.00-------------------------------------1.00-------------1.00-------------------------------------
........................................................................GCGGAGGGCGGAGGGTGAC....................................................................................................................................................................................................................................................................................................1911.000.00------11.00---------------------------------------------------------------------------------------------------------
..........................................................................GGAGGGCGGAGGGCGGAGCGTT...............................................................................................................................................................................................................................................................................................2210.000.00-------10.00--------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGGCGGGCGGCGGGTCGGG......................................................................................................................................................................................................................1910.000.00----------------------2.001.00-----------------------1.00-------1.00---------------1.00------------1.00---------1.00--1.001.00-------------
..................................................................................GAGGGCGGAGGGCGGAGGGCA........................................................................................................................................................................................................................................................................................2110.000.00--------10.00-------------------------------------------------------------------------------------------------------
...............................................................................................................AGGGCGGAGGGCGGAGAAG.............................................................................................................................................................................................................................................................1910.000.00---------10.00------------------------------------------------------------------------------------------------------
.....................................................................................................CGGAGGGCGGAGGGCGGAGGGCGGAAA...............................................................................................................................................................................................................................................................279.000.00-----------9.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGC..............................................................................................................................................................................................................................2008.008.00--7.00-----------------------------------------------------------------------------1.00-------------------------------
...............................................................................................................................................CGGCGGGCGGCGGGCGGC..............................................................................................................................................................................................................................1807.007.00---1.001.00-------3.00-----1.00--------------------------------------------------1.00------------------------------------------
...................................................................................................................................................................................................GCGCTGCTCCGGAGCAGCT.........................................................................................................................................................................1917.007.00----------7.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGGCG.............................................................................................................................................................................................................................2007.007.00---2.003.00-------2.00---------------------------------------------------------------------------------------------------
...............................................................................................................................................CGGCGGGCGGCGGGCGGCG.............................................................................................................................................................................................................................1905.005.00--1.002.00--------1.00-----1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCG................................................................................................................................................................................................................................1805.005.00--5.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................CGGCGGGCGGCGGGCGGCGG............................................................................................................................................................................................................................2005.005.00---1.002.00-------1.00-----1.00---------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGTCG.............................................................................................................................................................................................................................205.000.00-------------3.00--2.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................AGATTGATTCACGGACCTG...................................................................................................1915.005.00-5.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGCGGGGGG........................................................................................................................................................................................................................2603.001.002.00-------------------------------------------------1.00-------------------------------------------------------------
..................................................................................................................................................................................................................................................................CACGCAGAGATTGATTCACGGACCTG...................................................................................................2613.003.00------------------------------------1.00-----------------------------------------1.00----------------1.00----------------
.........................................................................................................................................................................................................................................................................AGATTGATTCACGGACCTGT..................................................................................................2013.003.00-3.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CGGGCGGCGGGCGGCGGTCGG........................................................................................................................................................................................................................2102.001.00----1.00-----------------------------------------------------------------1.00-----------------------------------------
..............................................................................................................................................................................................................................................ACTGGAACCGCTCCCATCCC.............................................................................................................................2012.002.00-2.00--------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGGCGG............................................................................................................................................................................................................................2102.002.00---2.00------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................AGAGATTGATTCACGGACCTG...................................................................................................2112.002.00-2.00--------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................CCCACGCAGAGATTGATTCACGGACCTG...................................................................................................2812.002.00-----2.00----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GATTGATTCACGGACCTG...................................................................................................1812.002.00--------------------------------------------------------------1.00------------------1.00------------------------------
........................................................................................................................................................................................................GCTCCGGAGCAGCTCGGC.....................................................................................................................................................................1812.002.00---------------------1.00------------------------------------------1.00-----------------------------------------------
............................................................................................................................................GGGCGGCGGGCGGCGGG..................................................................................................................................................................................................................................1702.002.00---------------2.00------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................CTCCGGAGCAGCTCGGCCAGATTA..............................................................................................................................................................2412.002.00----------------------------------2.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................CTGCTCCGGAGCAGCTCGGC.....................................................................................................................................................................2012.002.00----------1.00------------------1.00----------------------------------------------------------------------------------
......................................CACGGAGCGCACGTAAGCACGCGGAG...............................................................................................................................................................................................................................................................................................................................2612.002.00-------------------------------------2.00--------------------------------------------------------------------------
...........................................................................................................................................................................................................CCGGAGCAGCTCGGCCAGA.................................................................................................................................................................1912.002.00-----1.00----------------------------------------------------1.00-----------------------------------------------------
..............................................................................................................................................................................................................................................................TCCCCACGCAGAGATTGATT.............................................................................................................2012.002.00------------------------2.00---------------------------------------------------------------------------------------
...............AGTCCCGCGTCGGTCGCCG.............................................................................................................................................................................................................................................................................................................................................................1912.002.00--------------------2.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................GTGTCTTTGGGCAGGTCGGG............................................2012.002.00-2.00--------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CCGGAGCAGCTCGGCCTA..................................................................................................................................................................181.000.00--------------------1.00-------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGGCGGTG..........................................................................................................................................................................................................................2301.002.00-----------------1.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................CTGGCTGCCGCGCTGCTCCGG................................................................................................................................................................................2111.001.00-----1.00----------------------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGGAG.............................................................................................................................................................................................................................201.000.00---------------------------------------1.00------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TCTTTGGGCAGGTCGGGAAACC.......................................2211.001.00-----------------------------------1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................GATTCACGGACCTGTGT................................................................................................1711.001.00--------------------------------------------1.00-------------------------------------------------------------------
........................................................................................................................................CGGAGGGCGGCGGGCGGCGG...................................................................................................................................................................................................................................2021.001.00----------------------------------------------------------------------------------------------------0.50-0.50---------
................................................................................................................................................................CGGGTTGTGGGGGCG................................................................................................................................................................................................................1511.001.00--------------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................AGATTGATTCACGGACCTGTG.................................................................................................2111.001.00-----1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................CGCAGAGATTGATTCACGGACCTG...................................................................................................2411.001.00-1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................GCGCTGCTCCGGAGCAGGT.........................................................................................................................................................................191.000.00----------1.00-----------------------------------------------------------------------------------------------------
................................................................................................................................................GGCGGGCGGCGGGCGGTCG............................................................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................................CGGAGGGCGGAGGGCGGCGGGGG.......................................................................................................................................................................................................................................231.000.00-----------------------------------------1.00----------------------------------------------------------------------
......................................................................................................................................GGCGGAGGGCGGCGGCGGA......................................................................................................................................................................................................................................191.000.00--------------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................GGGCGGCGGGCGGCGGGCGAATA............................................................................................................................................................................................................................231.000.00------------------------------------------------1.00---------------------------------------------------------------
....................................................................................................................................AGGGCGGAGGGCGGCGGGGTGA.....................................................................................................................................................................................................................................221.000.00---------------------------------------------------------------------------------------1.00------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGCG.............................................................................................................................................................................................................................2101.001.00---------------1.00------------------------------------------------------------------------------------------------
................................................................................................................................................GGCGGGCGGCGGGCGGCGGAG..........................................................................................................................................................................................................................2101.001.00---------------------------------1.00------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GATTGATTCACGGACCT....................................................................................................1711.001.00---------------------------------------------------------------------------------------------1.00------------------
......................................................................................................................................................CGGCGGGCGGCGGGTGGGA......................................................................................................................................................................................................................191.000.00--------------1.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................CGGCGGGCGGCGGGTTTA.......................................................................................................................................................................................................................181.000.00------------------------------------------------------------------------1.00---------------------------------------
........................................................................................................................................................GCGGGCGGCGGGTTGTGGGGGCGGCCCC...........................................................................................................................................................................................................2811.001.00-----------------------------------1.00----------------------------------------------------------------------------
....................................................................................................................................AGGGCGGAGGGCGGCGGGCAC......................................................................................................................................................................................................................................211.000.00-----------------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGCCGA............................................................................................................................................................................................................................211.000.00-------------1.00--------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................ATCTGTAAAATGTGAGCT...........181.000.00--------------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................GCGGCGGGCGGCGGGTGGAG......................................................................................................................................................................................................................201.000.00------1.00---------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................CCACGCAGAGATTGATTCA...........................................................................................................1911.001.00----------------------------------------------------------------------------------1.00-----------------------------
..................................................................................................................................................CGGGCGGCGGGCGGCGG............................................................................................................................................................................................................................1701.001.00---------------1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGCGGGGTGG.......................................................................................................................................................................................................................2701.001.001.00---------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGTTTT...........................................................................................................................................................................................................................231.000.00------------------------1.00---------------------------------------------------------------------------------------
............................................................................................................................GAGGGCGGAGGGCGGAGGGCGGCGGGCTGC.....................................................................................................................................................................................................................................301.000.00-------------------------------------------------1.00--------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGCCC.............................................................................................................................................................................................................................201.000.00-----------------1.00----------------------------------------------------------------------------------------------
.......................................................................................................................................................GGCGGGCGGCGGGTTTT.......................................................................................................................................................................................................................171.000.00-----------------------------------------------------1.00----------------------------------------------------------
................................................................................................................................................GGCGGGCGGCGGGCGGCGGG...........................................................................................................................................................................................................................2001.001.00---------------1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TTATCACTGGAACCGCTCCCATCCCCACGCA.......................................................................................................................3111.001.00--------------------------------------------------------------------------------------1.00-------------------------
................GTCCCGCGTCGGTCGCCA.............................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------------1.00--------------------------
............................................................................................................................................................................................................CGGAGCAGCTCGGCCAGA.................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------1.00----------------------
........................................................................................................................................CGGAGGGCGGCGGGCGGGGG...................................................................................................................................................................................................................................201.000.00--------------------------------------1.00-------------------------------------------------------------------------
...........................................................................................................................................AGGGCGGCGGGCGGCGGAGGG...............................................................................................................................................................................................................................211.000.00---------------------------------1.00------------------------------------------------------------------------------
......................................................................................................................................GGCGGAGGGCGGCGGCGT.......................................................................................................................................................................................................................................181.000.00----------------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................................................CGGCGGGCGGCGGGTCGT.......................................................................................................................................................................................................................181.000.00-------------1.00--------------------------------------------------------------------------------------------------
.........................CGGTCGCCGCAGTCACGGAGCGCACG............................................................................................................................................................................................................................................................................................................................................2611.001.00---------------------------------------------------1.00------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGTTT.............................................................................................................................................................................................................................201.000.00-------------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CAATTCGCTGGCTGCCGCGCTGT.....................................................................................................................................................................................231.000.00------------------------------------------------------------------------------------------------1.00---------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGCGGG...........................................................................................................................................................................................................................2301.001.00------------------1.00---------------------------------------------------------------------------------------------
...................................AGTCACGGAGCGCACGTAAG........................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------1.00------------------------------------------------
................................................................................................................................................GGCGGGCGGCGGGCGGAGG............................................................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------------
...........................GTCGCCGCAGTCACGGAGCG................................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------------1.00---------------------
..................................................................................................................................................................................CCAATTCGCTGGCTGCCGCGCT.......................................................................................................................................................................................2211.001.00-------------------------------------------------------------------------1.00--------------------------------------
............................................................................................................................................................................................................CGGAGCAGCTCGGCCAGATT...............................................................................................................................................................2011.001.00---------------------1.00------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGCGGCGGGCGGCGGT..................................................................................................................................................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................CTGGAACCGCTCCCATCCCCACGC........................................................................................................................2411.001.00-----1.00----------------------------------------------------------------------------------------------------------
..................................CAGTCACGGAGCGCACGT...........................................................................................................................................................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------------------------1.00-------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGACG.............................................................................................................................................................................................................................2101.005.00--1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGCGGAACG........................................................................................................................................................................................................................2601.001.00------------1.00---------------------------------------------------------------------------------------------------
...................CCGCGTCGGTCGCCGCAGTCACGGAGCG................................................................................................................................................................................................................................................................................................................................................2811.001.00--------------------------------------1.00-------------------------------------------------------------------------
..........................................................................................................................................GAGGGCGGCGGGCGGCGGGCGGCGGGCTA........................................................................................................................................................................................................................291.000.00---------------------------------------------------------------------------1.00------------------------------------
...........................................................................................................................................AGGGCGGCGGGCGGCGGCGG................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------1.00----------------------------------------------------
..........................................................................................................................................................................................................TCCGGAGCAGCTCGGCCAGA.................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------------1.00--------------------
..........................................................................................................................................GAGGGCGGCGGGCGGCGGGCA................................................................................................................................................................................................................................211.000.00----------------------------------------------------------------------------------------1.00-----------------------
................................................................................................................................GCGGAGGGCGGAGGGCGGCGGGGTG......................................................................................................................................................................................................................................251.000.00-------------------------------------------------------------1.00--------------------------------------------------
....................................................................................................................................................................................................CGCTGCTCCGGAGCAGAC.........................................................................................................................................................................181.000.00-----------------------------------------------------------------------------1.00----------------------------------
....................................................................................................................................................................................................................CTCGGCCAGATTAAGTGG.........................................................................................................................................................1811.001.00---------------------------------------------------------1.00------------------------------------------------------
....................................................................................................................................................GGCGGCGGGCGGCGGGTGGGG......................................................................................................................................................................................................................211.000.00----------------------------------------1.00-----------------------------------------------------------------------
......................................................................................................................................................CGGCGGGCGGCGGGTTGTGGGGGCGG...............................................................................................................................................................................................................2611.001.00--------------1.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................GAGATTGATTCACGGACCTGTGTT...............................................................................................2411.001.00-----1.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CTTATCACTGGAACCGCTCC...................................................................................................................................2011.001.00-----1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................CGGGCGGCGGGTTGTCTGG...................................................................................................................................................................................................................191.000.00-------------------------------1.00--------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................CCTTATCACTGGAACCG.......................................................................................................................................1711.001.00------------------------------------1.00---------------------------------------------------------------------------
.....................................................................................................................................................GCGGCGGGCGGCGGGTGTCG......................................................................................................................................................................................................................201.000.00-----------------1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCGGCGG............................................................................................................................................................................................................................2201.001.00--1.00-------------------------------------------------------------------------------------------------------------
........................TCGGTCGCCGCAGTCACGGAGC.................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------1.00--------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGTGG.............................................................................................................................................................................................................................201.000.00-------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................AGGGCGGAGGGCGGCGGGCGTT.....................................................................................................................................................................................................................................221.000.00-------------------------------------------------------------------1.00--------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGTAGG............................................................................................................................................................................................................................211.000.00----------------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGCGGGCGGCGGGCGTCGG............................................................................................................................................................................................................................211.000.00-------------1.00--------------------------------------------------------------------------------------------------
....................CGCGTCGGTCGCCGCAGT.........................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------1.00----------------------------------------------
.....................................................................................................................................GGGCGGAGGGCGGCGGGAGGC.....................................................................................................................................................................................................................................211.000.00-------------------------------1.00--------------------------------------------------------------------------------
................................................................................................................................................GGCGGGCGGCGGGCGGCGG............................................................................................................................................................................................................................1901.001.00---------------1.00------------------------------------------------------------------------------------------------
................................................................................................................................................................CGGGTTGTGGGGGCGGT..............................................................................................................................................................................................................171.000.00--------------1.00-------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................TCCGGAGCAGCTCGGCCA...................................................................................................................................................................1811.001.00---------------------1.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................TCCGGAGCAGCTCGGCCAGAT................................................................................................................................................................2111.001.00-----------------------------1.00----------------------------------------------------------------------------------
......................................CACGGAGCGCACGTAAGCACGCG..................................................................................................................................................................................................................................................................................................................................2311.001.00----------------------------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................GGCGGCGGGCGGCGGGCTT...............................................................................................................................................................................................................................191.000.00--------------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CAATTCGCTGGCTGCCGCG.........................................................................................................................................................................................1911.001.00--------------------------------1.00-------------------------------------------------------------------------------
...........................GTCGCCGCAGTCACGGAG..................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------1.00-----------------------------------
................................................................................................................................................GGCGGGCGGCGGGCGGTA.............................................................................................................................................................................................................................181.000.001.00---------------------------------------------------------------------------------------------------------------
................................................................................................GAGGGCGGAGGGCGGAGGGCGGAGGGCGGA.................................................................................................................................................................................................................................................................3090.890.89---------------------------------------------------------------------------------------------------0.89------------
........................................................................................................................................CGGAGGGCGGCGGGCG.......................................................................................................................................................................................................................................1650.600.60-----------------------------------------0.20--------------------------------------------------------------0.40-------
............................................................................................................................................................................................................CGGAGCAGCTCGGCCAG..................................................................................................................................................................1720.500.50---------------------------------------0.50------------------------------------------------------------------------
.................................................................................................................................CGGAGGGCGGAGGGCGGC............................................................................................................................................................................................................................................1840.500.50-----------------------------------------------------------------------------------------------------------0.250.25---
............................................................................................................................................................................................................CGGAGCAGCTCGGCC....................................................................................................................................................................1550.400.40-------------------------------------------------------------------------------------------------------0.40--------
.......................................................................................................................................GCGGAGGGCGGCGGGCG.......................................................................................................................................................................................................................................1730.330.33----------------------------------------0.33-----------------------------------------------------------------------
.................................................................................................................................CGGAGGGCGGAGGGCGGCGG..........................................................................................................................................................................................................................................2030.330.33-------------------------0.33--------------------------------------------------------------------------------------
...........................................................................................................................................AGGGCGGCGGGCGGCGGG..................................................................................................................................................................................................................................1860.330.33------------------------------------------0.170.17--------------------------------------------------------------------
............................................................................................................................GAGGGCGGAGGGCGGAGGGCGGC............................................................................................................................................................................................................................................2330.330.33---------------------------------------------------------------------------------------------------------0.33------
................................................................................................................................GCGGAGGGCGGAGGGCGGCG...........................................................................................................................................................................................................................................2040.250.25----------------0.25-----------------------------------------------------------------------------------------------
.........................................................................................................................................GGAGGGCGGCGGGCGGCGGGCGGC..............................................................................................................................................................................................................................2440.250.25----------------------------------------------------------------------------------------------------------0.25-----
.........................................................................................................................................GGAGGGCGGCGGGCGGC.....................................................................................................................................................................................................................................1760.170.17-------------------------------------------------------------------------------------------------------------0.17--
...................................................................................................................................GAGGGCGGAGGGCGGCG...........................................................................................................................................................................................................................................1780.120.12--------------------------------------------------------------------------------------------------------------0.12-
..................................................................................................................................GGAGGGCGGAGGGCGGC............................................................................................................................................................................................................................................1780.120.12---------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GCGTCCTCCCTCTCCAGTCCCGCGTCGGTCGCCGCAGTCACGGAGCGCACGTAAGCACGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGAGGGCGGCGGGCGGCGGGCGGCGGGTTGTGGGGGCGGCCCCAATTCGCTGGCTGCCGCGCTGCTCCGGAGCAGCTCGGCCAGATTAAGTGGCCCTTATCACTGGAACCGCTCCCATCCCCACGCAGAGATTGATTCACGGACCTGTGTTCGAGTCTTCACTCGTACATTCTACTTGCTTTGTGTCTTTGGGCAGGTCGGGAAACCTCTCAGCCTCATCTGTAAAATGTGATCATAAATACCGGG
.........................................................................................................................................((((((.((((((((((((.((((((((((.(((.....))))))))))))).)))))))((((((....))))))..(((((.......))))).............)))))))).)))..((((((................))))))................................................................................................
.........................................................................................................................................138...................................................................................................................................................288.............................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189782SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577589(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
GSM956925PAZD5GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
TAX577590(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................................................CGGCGGGCGGCGGGCAAAA............................................................................................................................................................................................................................. 192.000.00------------------------------2.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................CACAAAGCAAGTAGAATG............................................................. 1821.501.50-----1.00-----------------------------------------------------------------------------------------------0.50----------
.....................................................................................................................................................................................ATTCGCTGGCTGCCGACTG....................................................................................................................................................................................... 191.000.00----------------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................GCTGCCGCGCTGCTCATTG............................................................................................................................................................................... 191.000.00----------------------------1.00-----------------------------------------------------------------------------------