ID: uc001kne.2_intron_0_0_chr10_99116954_r.5p
GENE: (8)
chr10:99118094-99118343-


(10)
BRAIN 		(8)
BREAST 		(14)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(1)
OTHER 		(4)
SKIN 		(1)
UTERUS

Sense strand
CCGGATCCCTATGCCTACATCCCCCTCAACAGAAGCAAGCTCAACCGCAGGTATGACGCTGTGCCAGGCAGGCTGGGGGCTGGAGGATGGGTGGGGATGAGGGAGCAGAGTGCTCTAAAGAAGGGAAGGCCTTATTAAACTCTCAGCTCAATTTGAGTCTCTTCCAGCTTTTTTTTTTAACATGCACCTATATCATGTAGCTGGTACCTACCTGTATTACTGACTTGAACTGCTTCTTTATTTTTTTATT
........................................................((((.((((.....(((.....)))........)))).)).))..(((((.....)))))......................................................................................................................................
..................................................51....................................................................121...............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577742(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040029(GSM532914)
G026T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029129(GSM416758)
SW480. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................GCAAGCTCAACCGCAGGAAG....................................................................................................................................................................................................209.000.009.00------------------------------------------
.................................................................................................TGAGGGAGCAGAGTGCATAG.....................................................................................................................................209.000.00-4.00-3.00-------1.00--------------------------1.00----
.................................................................................................TGAGGGAGCAGAGTGTAT.......................................................................................................................................187.000.00--2.00-1.00------1.00-1.00--------1.00----------------1.00---
.................................................................................................TGAGGGAGCAGAGTGTA........................................................................................................................................176.000.00--1.00-1.00-1.00--------------1.00-----1.00------1.00--------
.................................................................................................TGAGGGAGCAGAGTGAATA......................................................................................................................................195.000.00--2.00---1.00------1.00-----------1.00-----------------
.................................................................................................TGAGGGAGCAGAGTGTATA......................................................................................................................................195.000.00--1.00-1.001.00----1.00-1.00------------------------------
.................................................................................................TGAGGGAGCAGAGTGCATA......................................................................................................................................194.000.00-----1.00--2.00---------1.00------------------------
.................................................................................................TGAGGGAGCAGAGTGCA........................................................................................................................................173.000.00----1.00-------------------1.00----1.00-------------
.................................................................................................TGAGGGAGCAGAGTGCATAA.....................................................................................................................................202.000.00-1.00---1.00-------------------------------------
.................................................................................................TGAGGGAGCAGAGTGCACAG.....................................................................................................................................202.000.00-1.00-1.00---------------------------------------
.................................................................................................TGAGGGAGCAGAGTGAA........................................................................................................................................172.000.00----------------1.00--1.00-----------------------
..................................................GTATGACGCTGTGCCAGGCAGG..................................................................................................................................................................................2211.001.00------------------------------1.00------------
.........................................................................................................................................................................................................................................TTCTTTATTTTTTTATTCCTC211.000.00-----------------------------------------1.00-
...........................................................TGTGCCAGGCAGGCTGGAG............................................................................................................................................................................191.000.00---------1.00---------------------------------
........................................................................................................................................................................................................................................CTTCTTTATTTTTTTATTAG201.000.00----------------------------------------1.00--
.............................................................................................................................................................................TTTTTAACATGCACCTTATA.........................................................201.000.00---1.00---------------------------------------
.................................................................................................TGAGGGAGCAGAGTGTGTA......................................................................................................................................191.000.00--------------1.00----------------------------
...............................................................................CTGGAGGATGGGTGGGGA.........................................................................................................................................................1821.001.00--------------------1.00----------------------
.........................................................................................................................................................................................................TGGTACCTACCTGTATTACTGACTTGAACTGC.................3211.001.00-----------------------1.00-------------------
.................................................................................................TGAGGGAGCAGAGTGTAGT......................................................................................................................................191.000.00------------1.00------------------------------
.................................................................................................TGAGGGAGCAGAGTGTAAC......................................................................................................................................191.000.00--------------------------1.00----------------
...............................GAAGCAAGCTCAACCGCAG........................................................................................................................................................................................................1911.001.00-------------------------------------1.00-----
............GCCTACATCCCCCTCAACAGAAGCAAGC..................................................................................................................................................................................................................2811.001.00-------1.00-----------------------------------
...............................................................CCAGGCAGGCTGGGGGCTTGG......................................................................................................................................................................211.000.00----------------------------1.00--------------
.................................AGCAAGCTCAACCGCAGGAAGA...................................................................................................................................................................................................221.000.00---------------------------------1.00---------
...................................................................................................................................................................CCAGCTTTTTTTTTTAATATG..................................................................211.000.00-----------------------------------1.00-------
.............................................................................................GGGATGAGGGAGCAGAAAA..........................................................................................................................................191.000.00-----------------1.00-------------------------
.................................................................................................TGAGGGAGCAGAGTGCAAGG.....................................................................................................................................201.000.00-1.00-----------------------------------------
................................................................................................................CTCTAAAGAAGGGAAGGC........................................................................................................................1811.001.00--------------------------------1.00----------
.................................................................................................TGAGGGAGCAGAGTGGATA......................................................................................................................................191.000.00--1.00----------------------------------------
..................................................................................................GAGGGAGCAGAGTGCATAG.....................................................................................................................................191.000.00-1.00-----------------------------------------
..................................GCAAGCTCAACCGCAGGCAA....................................................................................................................................................................................................201.000.001.00------------------------------------------
..............................................................................................................................................................................................TATCATGTAGCTGGTAATA.........................................191.000.00---1.00---------------------------------------
...................TCCCCCTCAACAGAAGCAAGC..................................................................................................................................................................................................................2111.001.00-------1.00-----------------------------------
.................................................................................................TGAGGGAGCAGAGTGTAG.......................................................................................................................................181.000.00-----1.00-------------------------------------
.................................................................................................TGAGGGAGCAGAGTGAAAG......................................................................................................................................191.000.00-1.00-----------------------------------------
.................................................................................................TGAGGGAGCAGAGTGAAT.......................................................................................................................................181.000.00---------------1.00---------------------------
.................................................................................................TGAGGGAGCAGAGTGTAAT......................................................................................................................................191.000.00----------1.00--------------------------------
.................................................................................................TGAGGGAGCAGAGTGCT........................................................................................................................................1720.500.50--0.50----------------------------------------
.................................................................................................TGAGGGAGCAGAGTGCTTTG.....................................................................................................................................2020.500.50--------------0.50----------------------------
.................................................................................................TGAGGGAGCAGAGTGCTTAGT....................................................................................................................................2120.500.50---------------0.50---------------------------

Antisense strand
CCGGATCCCTATGCCTACATCCCCCTCAACAGAAGCAAGCTCAACCGCAGGTATGACGCTGTGCCAGGCAGGCTGGGGGCTGGAGGATGGGTGGGGATGAGGGAGCAGAGTGCTCTAAAGAAGGGAAGGCCTTATTAAACTCTCAGCTCAATTTGAGTCTCTTCCAGCTTTTTTTTTTAACATGCACCTATATCATGTAGCTGGTACCTACCTGTATTACTGACTTGAACTGCTTCTTTATTTTTTTATT
........................................................((((.((((.....(((.....)))........)))).)).))..(((((.....)))))......................................................................................................................................
..................................................51....................................................................121...............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577742(Rovira)
total RNA. (breast)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040029(GSM532914)
G026T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029129(GSM416758)
SW480. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............CTACATCCCCCTCAACAGATA....................................................................................................................................................................................................................... 211.000.00-------------------------------1.00-----------
.................................................................................................................................................................TTCCAGCTTTTTTTTTCTCC..................................................................... 201.000.00---------1.00---------------------------------
..........................................................................................................................................................AAGCTGGAAGAGACTC................................................................................ 1670.140.14------------------------------------------0.14