| (3) B-CELL | (2) BREAST | (7) CELL-LINE | (4) LIVER | (1) OTHER | (3) SKIN | (1) XRN.ip |
| TTGAAGCAACAAAACAATATGCCTTGGGCAGAAAGAAAAATGGTGAAGAGGTCAGTGATTTCTTTTTAAATTCAATTCTATAACTATGCATTGAGTATAATGACATCAAATACTGTATTAGATGCTAGAGATGAGGAGAAAGGATACAAAAGTACTTGTTCTAATGCTTGCATAAATGTCATAGAGAACAAGATAAAATACTATATTTAGGCAGTATATCCTATAAGAACACAGAAAAGGAAAAAGTCAT .......................................................((((.((...(((.(((((((..(((....))).))))))).))).)).)))).............................................................................................................................................. .......................................................56.....................................................................127......................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | TAX577588(Rovira) total RNA. (breast) | SRR191603(GSM715713) 71genomic small RNA (size selected RNA from t. (breast) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................TCTTTTTAAATTCAATCTG........................................................................................................................................................................... | 19 | 91.00 | 0.00 | 60.00 | 22.00 | - | 4.00 | - | 3.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | |
| ............................................................TCTTTTTAAATTCAATCCG........................................................................................................................................................................... | 19 | 4.00 | 0.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................TCTTTTTAAATTCAACCTG........................................................................................................................................................................... | 19 | 3.00 | 0.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................GCCTTGGGCAGAAAGAAAAATGGTG............................................................................................................................................................................................................. | 25 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TCTTTTTAAATTCAATCTA........................................................................................................................................................................... | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................ATGCCTTGGGCAGAAAGAAAAA.................................................................................................................................................................................................................. | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TTGGGCAGAAAGAAAAATGGT.............................................................................................................................................................................................................. | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................TTGGGCAGAAAGAAAAATGGTGAA........................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................TGGGCAGAAAGAAAAATGGT.............................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................CCTTGGGCAGAAAGAAAAAAA................................................................................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ......................CTTGGGCAGAAAGAAAAATGGTGAAGA......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................TCTTTTTAAATTCAATCAG........................................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................GCCTTGGGCAGAAAGAAAAATGGTGAA........................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGACATCAAATACTGTATTAGAT............................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................AGGCAGTATATCCTATAGTT...................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................TTTCTTTTTAAATTCAATCTG........................................................................................................................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................GCCTTGGGCAGAAAGAAAAATG................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................CAGAAAGAAAAATGGTGAAGAGTAC..................................................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| ............AACAATATGCCTTGGGCAGAAAGA...................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................TCTTTTTAAATTCAATCTGG.......................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................CTTGGGCAGAAAGAAAAATGGTG............................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................TGGGCAGAAAGAAAAATGGTG............................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................AGAGATGAGGAGAAAGGAT......................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................GTATTAGATGCTAGAGATGA.................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................AGTGATTTCTTTTTAAGCAG................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| TTGAAGCAACAAAACAATATGCCTTGGGCAGAAAGAAAAATGGTGAAGAGGTCAGTGATTTCTTTTTAAATTCAATTCTATAACTATGCATTGAGTATAATGACATCAAATACTGTATTAGATGCTAGAGATGAGGAGAAAGGATACAAAAGTACTTGTTCTAATGCTTGCATAAATGTCATAGAGAACAAGATAAAATACTATATTTAGGCAGTATATCCTATAAGAACACAGAAAAGGAAAAAGTCAT .......................................................((((.((...(((.(((((((..(((....))).))))))).))).)).)))).............................................................................................................................................. .......................................................56.....................................................................127......................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | TAX577588(Rovira) total RNA. (breast) | SRR191603(GSM715713) 71genomic small RNA (size selected RNA from t. (breast) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................ATTTATGCAAGCATTAGAAC......................................................................... | 20 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................GATGAGGAGAAAGGATAT....................................................................................................... | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |