ID: uc001kkh.2_intron_3_0_chr10_97023821_r.3p
GENE: (3)
chr10:97023771-97024020-


(1)
AGO2.ip
(1)
B-CELL
(1)
BREAST
(5)
CELL-LINE
(1)
CERVIX
(4)
HEART
(2)
LIVER
(1)
OTHER
(1)
RRP40.ip
(3)
SKIN
(4)
UTERUS
(1)
XRN.ip

Sense strand
AGGTGCCCATTGTGGGAAACTTCCCCAGTCATTGCCCGTGTGTCTCAGTGGGTGTGTCAGTGTCCCTCAGCTAAAGTTTGGGTTGAACTAGGGCCATCTTAGCAGCTGGAACACCTCTCCCTGGCGCTCAGCCTGCACTGCCCATCAAGGGGTTTGCATTGGATGCCCCCCTTGATTTCTCCTCTGATCCCTGCCTGCAGGAGGTCCTGCACATAGGAAGCGCCCACAACCGAAGTGCCATGCCCTTTAC
.....................................................................................................(((((.(((.((.........(((.....)))..........(((((((((...((((...)))).)))))))))........)).)))..)).)))....................................................
..............................................................................................95.......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR040043(GSM532928)
G428T. (cervix)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
...................................................................................................TAGCAGCTGGAACACTTC.....................................................................................................................................1831.000.0013.006.007.005.00------------------
...................................................................................................TAGCAGCTGGAACACATC.....................................................................................................................................1810.000.006.002.001.001.00------------------
...................................................................................................TAGCAGCTGGAACACTT......................................................................................................................................178.000.005.003.00--------------------
...................................................................................................TAGCAGCTGGAACACTTCT....................................................................................................................................197.000.003.002.001.00-1.00-----------------
...................................................................................................TAGCAGCTGGAACACGTC.....................................................................................................................................184.000.002.001.00-1.00------------------
...................................................................................................TAGCAGCTGGAACACCTC.....................................................................................................................................1813.003.001.001.001.00-------------------
...................................................................................................TAGCAGCTGGAACACCT......................................................................................................................................1712.002.001.001.00--------------------
...................................................................................................TAGCAGCTGGAACACATCT....................................................................................................................................192.000.00---2.00------------------
..........................................................................................................................................................................................................................AGCGCCCACAACCGAAGTGCCATGCC......2612.002.00-------------1.00---1.00----
...................................................................................................TAGCAGCTGGAACACAT......................................................................................................................................172.000.001.001.00--------------------
...................................................................................................TAGCAGCTGGAACACGT......................................................................................................................................172.000.001.001.00--------------------
...................................................................................................TAGCAGCTGGAACACCTATG...................................................................................................................................2011.002.00----1.00-----------------
.................................................................................................CTTAGCAGCTGGAACACCT......................................................................................................................................1911.001.00-----1.00----------------
...................................................................................................................................................................................................................CATAGGAAGCGCCCACAACCGAAGTGC............2711.001.00------1.00---------------
............................................................................................................................................................................................................................CGCCCACAACCGAAGTGCCATG........2211.001.00---------------1.00------
...................................................................................................TAGCAGCTGGAACACTTCG....................................................................................................................................191.000.00----1.00-----------------
........................................................................................................................................................................CCCTTGATTTCTCCTCTGATCCCTGCCTGCA...................................................3111.001.00---------1.00------------
...................................................................................................TAGCAGCTGGAACACCTCTGCA.................................................................................................................................2211.001.00----1.00-----------------
.................................................................................................CTTAGCAGCTGGAACACCTCTCCCT................................................................................................................................2511.001.00-----1.00----------------
................................................................................................................................................................................................................GCACATAGGAAGCGCCCACAA.....................2121.001.00--------1.00-------------
...................................................................................................................................................................................................................................AACCGAAGTGCCATGCCCT....1911.001.00--------------1.00-------
...................................................................................................TAGCAGCTGGAACACTTGT....................................................................................................................................191.000.001.00---------------------
....................................................................................................................................................................................CCTCTGATCCCTGCCTGCAG..................................................2011.001.00------1.00---------------
...................................................................................................TAGCAGCTGGAACACCTCC....................................................................................................................................1911.003.00----1.00-----------------
...................................................................................................TAGCAGCTGGAACACTTT.....................................................................................................................................181.000.00-1.00--------------------
...................................................................................................TAGCAGCTGGAACACCTCTG...................................................................................................................................2011.001.00----1.00-----------------
...................................................................................................TAGCAGCTGGAACACCTCT....................................................................................................................................1911.001.001.00---------------------
..................................................................................................................................................................................................................................CAACCGAAGTGCCATGCCCT....2011.001.00-------1.00--------------
.....................................................................................................................................................................................................................TAGGAAGCGCCCACAACCGAAGTGCCAT.........2811.001.00-----1.00----------------
................................................................................................................................................................................................................GCACATAGGAAGCGCCCATA......................201.000.00-----1.00----------------
...............................................................................................................................................................................................................TGCACATAGGAAGCGCCC.........................1820.500.50------------------0.50---
...............................................................................................................................................................................................................TGCACATAGGAAGCGCC..........................1720.500.50---------------------0.50
.....................................................................................................................................................................................................CAGGAGGTCCTGCACATAGGAAGCGCC..........................2720.500.50-----0.50----------------
......................................................................................................................................................................................................AGGAGGTCCTGCACATAGG.................................1920.500.50--------0.50-------------
......................................................................................................................................................................................................................AGGAAGCGCCCACAACCGAA................2020.500.50-------------------0.50--
......................................................................................................................................................................................................................................CGAAGTGCCATGCCC.....1520.500.50-------0.50--------------
......................................................................................................................................................................................................................AGGAAGCGCCCACAACCGAAG...............2120.500.50--------------------0.50-

Antisense strand
AGGTGCCCATTGTGGGAAACTTCCCCAGTCATTGCCCGTGTGTCTCAGTGGGTGTGTCAGTGTCCCTCAGCTAAAGTTTGGGTTGAACTAGGGCCATCTTAGCAGCTGGAACACCTCTCCCTGGCGCTCAGCCTGCACTGCCCATCAAGGGGTTTGCATTGGATGCCCCCCTTGATTTCTCCTCTGATCCCTGCCTGCAGGAGGTCCTGCACATAGGAAGCGCCCACAACCGAAGTGCCATGCCCTTTAC
.....................................................................................................(((((.(((.((.........(((.....)))..........(((((((((...((((...)))).)))))))))........)).)))..)).)))....................................................
..............................................................................................95.......................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR040043(GSM532928)
G428T. (cervix)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
...................................................................................................................................................................................TCCTCTGATCCCTGCCTA..................................................... 181.000.00-----------1.00----------
........................................................................................................................................................................................TGATCCCTGCCTGCAGTGTA.............................................. 201.000.00----------1.00-----------
...................................................................................................................................................................................TCCTCTGATCCCTGCCTAGTA.................................................. 211.000.00------------1.00---------
....................TTCCCCAGTCATTGCTGCA................................................................................................................................................................................................................... 191.000.00----------------1.00-----