ID: uc001kfa.2_intron_0_0_chr10_89578094_f.5p
GENE: (1)
chr10:89578044-89578293+


(1)
AGO2.ip 		(9)
B-CELL 		(1)
BRAIN 		(16)
BREAST 		(17)
CELL-LINE 		(10)
CERVIX 		(1)
FIBROBLAST 		(7)
HEART 		(3)
HELA 		(4)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(47)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CGACCCGCGGTCGCCGGCGCGGAGGGGGCGTGCTCCCAGGCTTAGAAACAGTGAGGGAGAGCAAATTCGCGCACCTGATGTCTGCTTAAGCTACCTGCTAGACTGAGACTTTCTGCGAAGCCGGCGTGTCTGCGAGCAGCACTCGCTAAGGCTCTGCGTTTAACAGACACTACCTTTGGGAAGGCGCTTATCACAAAAAGTCCCTGCCCTTCTCGCGGGCTCGGGGCGCAACCCTGACAAATCGGGCAGC
..............................................................................................(((.(((((..((.....))(((.((((((((.(((((....))).)).))))..)))).)))))))).)))....................................................................................
.........................................................................................90...........................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		GSE20417(GSM514985)
Colon and lung cancer pool. 		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR040037(GSM532922)
G243T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR191424(GSM715534)
138genomic small RNA (size selected RNA from . (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM532879(GSM532879)
G659N. (cervix)		GSM532887(GSM532887)
G761N. (cervix)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
.................................................................................................................................................CTAAGGCTCTGCGTTCAG.......................................................................................18147.005.00----1.00-2.00--3.00--2.00-2.00-2.001.001.002.001.004.00--3.00-2.00--1.002.00-1.001.001.00-1.001.00-1.00--------2.00---------1.00---1.00-------1.001.00-1.00--------1.00--------------1.00----1.00-1.00-------------1.00---
.................................................................................................................................................CTAAGGCTCTGCGTTC.........................................................................................16146.005.00------1.00-4.001.001.00-2.00-1.004.002.001.003.002.00------1.002.001.00---2.00---1.001.00-----1.001.001.002.002.00-1.00--1.002.00-2.00-----1.00--------------1.00-----------------------1.00---------------------
..............................................................................................CTGCTAGACTGAGACTTTCTGC......................................................................................................................................22120.0020.00--20.00-----------------------------------------------------------------------------------------------------------------------
................................................................................................GCTAGACTGAGACTTTCTG.......................................................................................................................................19120.0020.0017.002.00-------------------------------------------------------------------------------------------1.00----------------------------
..................................................................................................TAGACTGAGACTTTCTGCGAAGCCGGC.............................................................................................................................27110.0010.00-----10.00--------------------------------------------------------------------------------------------------------------------
................................................................................................GCTAGACTGAGACTTTCT........................................................................................................................................1818.008.008.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................AAAAGTCCCTGCCCTTTGT....................................197.000.00-------7.00------------------------------------------------------------------------------------------------------------------
.....................GAGGGGGCGTGCTCCGGC...................................................................................................................................................................................................................1826.000.50----3.00-----------------1.00---------------1.00-1.00---------------------------------------------------------------------------------
....................GGAGGGGGCGTGCTCCGGC...................................................................................................................................................................................................................195.000.001.00--------1.00-------------2.00----------1.00---------------------------------------------------------------------------------------
.................................................................................................................................................CTAAGGCTCTGCGTT..........................................................................................1515.005.00--------------------2.00-------2.00--------------------------------------------------------------------------1.00------------------
.................................................................................................................................................CTAAGGCTCTGCGTTCA........................................................................................1715.005.00---------1.00-----1.001.00---------------------------1.00--------------------------------------------------------------------1.00--------
...........................................................................................TACCTGCTAGACTGAGACTT...........................................................................................................................................2015.005.00---5.00----------------------------------------------------------------------------------------------------------------------
.....................GAGGGGGCGTGCTCCGGCG..................................................................................................................................................................................................................1925.000.50----4.00--------------------------1.00------------------------------------------------------------------------------------------
....................GGAGGGGGCGTGCTCCG.....................................................................................................................................................................................................................174.000.00------2.00---------------1.00--------------------------------------------------------------------------------------1.00------------
.......................................................................................AAGCTACCTGCTAGACTGAG...............................................................................................................................................2014.004.00-4.00------------------------------------------------------------------------------------------------------------------------
........................................................................................AGCTACCTGCTAGACTGAGA..............................................................................................................................................2014.004.00-4.00------------------------------------------------------------------------------------------------------------------------
....................GGAGGGGGCGTGCTCCGGCG..................................................................................................................................................................................................................204.000.00----1.00--------1.00--------------------------------------1.00---1.00-----------------------------------------------------------------
................................................................................................GCTAGACTGAGACTTTCTGC......................................................................................................................................2014.004.00---4.00----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGGGAGAGCAAATT.......................................................................................................................................................................................1713.003.00----------------------------------------------------------------------------------------1.00-------1.00--------------------1.00----
..................................................................................................TAGACTGAGACTTTCTGCGAAGCCGG..............................................................................................................................2613.003.00---2.00-1.00--------------------------------------------------------------------------------------------------------------------
.....................GAGGGGGCGTGCTCCGG....................................................................................................................................................................................................................1723.000.50----1.00---1.00---------------------------------------------------------------------------------------------------1.00-------------
...................CGGAGGGGGCGTGCTCCGGC...................................................................................................................................................................................................................2013.001.00----1.00------------1.00------------------------------------------------------------------------1.00-------------------------------
............................................................................................ACCTGCTAGACTGAGACTT...........................................................................................................................................1913.003.00-3.00------------------------------------------------------------------------------------------------------------------------
.................................................AGTGAGGGAGAGCAAATTCG.....................................................................................................................................................................................2013.003.00-------------------------3.00------------------------------------------------------------------------------------------------
.................................................................................................CTAGACTGAGACTTTCTGCGAAGC.................................................................................................................................2413.003.00-3.00------------------------------------------------------------------------------------------------------------------------
......................................................GGGAGAGCAAATTCGCGCACCTGATGTC........................................................................................................................................................................2812.002.00---------------------------------------1.00-------------------------1.00--------------------------------------------------------
.....................................AGGCTTAGAAACAGTGAGGGAG...............................................................................................................................................................................................2212.002.00-2.00------------------------------------------------------------------------------------------------------------------------
.................................................AGTGAGGGAGAGCAAATT.......................................................................................................................................................................................1812.002.00-------------------------------------------------------------------------------1.00---------------------1.00--------------------
.................................................................................................CTAGACTGAGACTTTCTGCGA....................................................................................................................................2112.002.00-1.00-------------------------------------------------------------1.00----------------------------------------------------------
.................................................AGTGAGGGAGAGCAAAT........................................................................................................................................................................................1712.002.00---------------------------------------------------------------------------1.00-----1.00----------------------------------------
................................................................................................GCTAGACTGAGACTTTCTGCGAAG..................................................................................................................................2412.002.00-2.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................AGACTGAGACTTTCTGCGAAG..................................................................................................................................2112.002.00---2.00----------------------------------------------------------------------------------------------------------------------
.......................................................................................AAGCTACCTGCTAGACTGA................................................................................................................................................1912.002.00---1.00-------1.00--------------------------------------------------------------------------------------------------------------
.......................................................................................................................GCCGGCGTGTCTGCGAGCA................................................................................................................1912.002.00---------------------------------------------------2.00----------------------------------------------------------------------
.................................................AGTGAGGGAGAGCAAATATTT....................................................................................................................................................................................2112.002.00-----------------------------------------2.00--------------------------------------------------------------------------------
....................GGAGGGGGCGTGCTCCGG....................................................................................................................................................................................................................182.000.00----------------------1.00----------1.00----------------------------------------------------------------------------------------
...............................................................................................TGCTAGACTGAGACTTTCTG.......................................................................................................................................2012.002.00-2.00------------------------------------------------------------------------------------------------------------------------
.................................................................................CTGCTTAAGCTACCTGCTAG.....................................................................................................................................................2012.002.00--------2.00-----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GGGCTCGGGGCGCAAAG.................171.000.001.00-------------------------------------------------------------------------------------------------------------------------
.............................................................................................CCTGCTAGACTGAGACTTT..........................................................................................................................................1911.001.00---1.00----------------------------------------------------------------------------------------------------------------------
...................CGGAGGGGGCGTGCTCCGT....................................................................................................................................................................................................................1911.001.00----1.00---------------------------------------------------------------------------------------------------------------------
..............CGGCGCGGAGGGGGCTGG..........................................................................................................................................................................................................................181.000.00------------------------------------------------------1.00-------------------------------------------------------------------
....................................................................................................................................................AGGCTCTGCGTTTAACAGA...................................................................................1911.001.00--------------------------------------------------------------------------1.00-----------------------------------------------
.....................................................................................................................................................................................................................CGCGGGCTCGGGGCGCACG..................191.000.00------------------------------------------------------------------------------1.00-------------------------------------------
.......................................................................................................................GCCGGCGTGTCTGCGAGC.................................................................................................................1811.001.00-----------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................................................CTAAGGCTCTGCGTTCTG.......................................................................................1811.005.00-------------------------------------------------1.00------------------------------------------------------------------------
.....................................................................................................ACTGAGACTTTCTGCGAAGCC................................................................................................................................2111.001.00--------------1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................CTAGACTGAGACTTTCTGCG.....................................................................................................................................2011.001.00--------------------------------------------------1.00-----------------------------------------------------------------------
....................GGAGGGGGCGTGCTCCTTC...................................................................................................................................................................................................................191.000.00-------------1.00------------------------------------------------------------------------------------------------------------
..................................................................................................TAGACTGAGACTTTCTGCGAAGCC................................................................................................................................2411.001.00------------------------------------------------------1.00-------------------------------------------------------------------
.............................................AAACAGTGAGGGAGAGCA...........................................................................................................................................................................................1811.001.00---------------------------------------------------------------------1.00----------------------------------------------------
....................GGAGGGGGCGTGCTCCCGCG..................................................................................................................................................................................................................201.000.00-------------------------------------------------------------------------------------1.00------------------------------------
............................................................................................ACCTGCTAGACTGAGACTTTCTGC......................................................................................................................................2411.001.00-----------------------------1.00--------------------------------------------------------------------------------------------
..................................................................................................TAGACTGAGACTTTCTGCGAAGCGC...............................................................................................................................2511.001.00-----1.00--------------------------------------------------------------------------------------------------------------------
......................AGGGGGCGTGCTCCCTCC..................................................................................................................................................................................................................181.000.00----------------------------------------------------------------------------------------------1.00---------------------------
......................................................................................................CTGAGACTTTCTGCGAAGCCGGC.............................................................................................................................2311.001.00-----------1.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................GAAGCCGGCGTGTCTGCGAG..................................................................................................................2011.001.00------------------------------------------1.00-------------------------------------------------------------------------------
........................................................GAGAGCAAATTCGCGCACCTGA............................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------1.00--------------------------------------------
...................CGGAGGGGGCGTGCTC.......................................................................................................................................................................................................................1611.001.00-------------------------------------------1.00------------------------------------------------------------------------------
.........................................................................................................AGACTTTCTGCGAAGCCGGCT............................................................................................................................211.000.00------------------------------------------------------------------------------------1.00-------------------------------------
.............................................................................................CCTGCTAGACTGAGACTTTC.........................................................................................................................................2011.001.00-1.00------------------------------------------------------------------------------------------------------------------------
.................................................AGTGAGGGAGAGCAAATA.......................................................................................................................................................................................1811.002.00--------------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................CTAGACTGAGACTTTCTGCGAAGCCGG..............................................................................................................................2711.001.00--------------------------------------------------1.00-----------------------------------------------------------------------
..........TCGCCGGCGCGGAGGGGGCGTG..........................................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------------------------------------------1.00----------------
...........................................................................................................ACTTTCTGCGAAGCCGGCG............................................................................................................................1911.001.00---1.00----------------------------------------------------------------------------------------------------------------------
....................GGAGGGGGCGTGCTCCCGCGG.................................................................................................................................................................................................................211.000.00-------------1.00------------------------------------------------------------------------------------------------------------
................................................................................TCTGCTTAAGCTACCTG.........................................................................................................................................................1711.001.00-----------------------------------------------------------1.00--------------------------------------------------------------
.........................................TTAGAAACAGTGAGGGAGAGC............................................................................................................................................................................................2111.001.00--------------1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................CTAGACTGAGACTTTCTGC......................................................................................................................................1911.001.00---1.00----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................TATCACAAAAAGTCCCTGCCCT........................................2211.001.00-----1.00--------------------------------------------------------------------------------------------------------------------
......................................................................................................CTGAGACTTTCTGCGAAGCCGG..............................................................................................................................2211.001.00--------------------------------------------------------------------------------------------------1.00-----------------------
....................GGAGGGGGCGTGCTCCGTCG..................................................................................................................................................................................................................201.000.00-------------1.00------------------------------------------------------------------------------------------------------------
..................................................................................................TAGACTGAGACTTTCTGCGAAGC.................................................................................................................................2311.001.00------------------------------------------------------------------------1.00-------------------------------------------------
.................................................................................................................................................CTAAGGCTCTGCGTTCAGC......................................................................................1911.005.00------1.00-------------------------------------------------------------------------------------------------------------------
....................GGAGGGGGCGTGCTCCCGCA..................................................................................................................................................................................................................201.000.00-------------1.00------------------------------------------------------------------------------------------------------------
...................................CCAGGCTTAGAAACAGTGAGGG.................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------1.00-----------------------------------
.............................................................................ATGTCTGCTTAAGCTACCTGCTAGA....................................................................................................................................................2511.001.00--------------------------------------------------------------------------------------------------------------1.00-----------
.........................................................................................GCTACCTGCTAGACTGAGACT............................................................................................................................................2111.001.00------------------------------------------------------------------1.00-------------------------------------------------------
.........GTCGCCGGCGCGGAGCCT...............................................................................................................................................................................................................................181.000.00---------------------------------------------------------1.00----------------------------------------------------------------
......GCGGTCGCCGGCGCGCC...................................................................................................................................................................................................................................171.000.00----------------------------------1.00---------------------------------------------------------------------------------------
.................................................AGTGAGGGAGAGCAAATCCGC....................................................................................................................................................................................2111.002.00----------------------------------------------------------------------------------------------------------1.00---------------
...................CGGAGGGGGCGTGCTCCG.....................................................................................................................................................................................................................1811.001.00----------------------------------------1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................................CTCGCGGGCTCGGGGGGAG....................191.000.00-----------------------------------------------------------------------------------------1.00--------------------------------
.........................................................................................................AGACTTTCTGCGAAGCCGG..............................................................................................................................1911.001.00---------------------------------------------------------------------------------------------------1.00----------------------
............................................................................................................................................ACTCGCTAAGGCTCTGCGTTTAACAG....................................................................................2611.001.00----1.00---------------------------------------------------------------------------------------------------------------------
....................................CAGGCTTAGAAACAGTGAGGGAGAG.............................................................................................................................................................................................2511.001.00---------------------------1.00----------------------------------------------------------------------------------------------
..............................................................................................CTGCTAGACTGAGACTTTCTGCGAAGCCGG..............................................................................................................................3011.001.00------------1.00-------------------------------------------------------------------------------------------------------------
..................................CCCAGGCTTAGAAACAGTGA....................................................................................................................................................................................................2011.001.00-1.00------------------------------------------------------------------------------------------------------------------------
...................CGGAGGGGGCGTGCTCC......................................................................................................................................................................................................................1711.001.00---------------------------------------------1.00----------------------------------------------------------------------------
..................................................................................................................GCGAAGCCGGCGTGTCTG......................................................................................................................1811.001.00--------------------------------------------------------------------------------1.00-----------------------------------------
........................................................................................................................CCGGCGTGTCTGCGAGCAGCA.............................................................................................................2111.001.00------------------------------------------1.00-------------------------------------------------------------------------------
....................................CAGGCTTAGAAACAGTGAGG..................................................................................................................................................................................................2011.001.00----1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................................GACTGAGACTTTCTGCG.....................................................................................................................................1711.001.00---1.00----------------------------------------------------------------------------------------------------------------------
................................................CAGTGAGGGAGAGCAAATTCG.....................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------1.00--------------------------
...................................................TGAGGGAGAGCAAATTCGC....................................................................................................................................................................................1911.001.00---------------------------------------------------------1.00----------------------------------------------------------------
..................................................................................................................................................TAAGGCTCTGCGTTTAG.......................................................................................171.000.00----------------------------------------------------------------1.00---------------------------------------------------------
................................................................................................GCTAGACTGAGACTTTCTGCGAAGC.................................................................................................................................2511.001.00-1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................GAGACTTTCTGCGAAGCCGG..............................................................................................................................2011.001.00-------------------------------1.00------------------------------------------------------------------------------------------
.......................................................................................................TGAGACTTTCTGCGAAGCCGG..............................................................................................................................2111.001.00-----------------------------1.00--------------------------------------------------------------------------------------------
......................AGGGGGCGTGCTCCCGCC..................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------------------------------------------1.00------
..........................................................................................................GACTTTCTGCGAAGCCGGCGTGTC........................................................................................................................2411.001.00------1.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................AGACTGAGACTTTCTGCGAAGCCG...............................................................................................................................2411.001.00-----------------------------------------------------------------------------------1.00--------------------------------------
.................................................................................................................................................CTAAGGCTCTGCGTTCCG.......................................................................................1811.005.00-----------------1.00--------------------------------------------------------------------------------------------------------
..............................................................................................CTGCTAGACTGAGACTTTCTG.......................................................................................................................................2111.001.00--------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................AGCTACCTGCTAGACTGA................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------------------1.00--------------
.............................................................................................................................................................................................................GCCCTTCTCGCGGGCTCGGGGCGCAA...................2611.001.00--------------------------------------------------------------------------------------------1.00-----------------------------
.......................................................................................................................GCCGGCGTGTCTGCGAGCAG...............................................................................................................2011.001.00---------------------------------------------------------------------------------------1.00----------------------------------
.............................................AAACAGTGAGGGAGAGCAAATTC......................................................................................................................................................................................2311.001.00---------------------------------------------------------------------------------------------------------------1.00----------
...............................................................................................TGCTAGACTGAGACTTTCTGCGAAGCCGGCGT...........................................................................................................................3211.001.00-----1.00--------------------------------------------------------------------------------------------------------------------
.........................................................................................................................CGGCGTGTCTGCGAGCAGCACTC..........................................................................................................2311.001.00-------------------------------------------------------------------1.00------------------------------------------------------
.................................................................................................................................................CTAAGGCTCTGCGTTCAGG......................................................................................1911.005.00----------------------------------------------------------------------------------------------------------------1.00---------
........................................................................................AGCTACCTGCTAGACTGAGACT............................................................................................................................................2211.001.00------------------------------------------------------------------------------------------------------------------1.00-------
.................................................................................................CTAGACTGAGACTTTCTGCGAAGCCG...............................................................................................................................2611.001.00-----------1.00--------------------------------------------------------------------------------------------------------------
....................GGAGGGGGCGTGCTCCCGC...................................................................................................................................................................................................................191.000.00-----------------------1.00--------------------------------------------------------------------------------------------------
..........................GGCGTGCTCCCAGGCTTAGA............................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------1.00-----------------------------------------------------
......GCGGTCGCCGGCGCGCCC..................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------------------1.00------------------------------
..............................................................................................CTGCTAGACTGAGACTT...........................................................................................................................................1711.001.00-----------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................................CTAGACTGAGACTTTCTGCGAAG..................................................................................................................................2311.001.00------------------------------------------------------------1.00-------------------------------------------------------------
.....................GAGGGGGCGTGCTCC......................................................................................................................................................................................................................1520.500.50----------------------0.50---------------------------------------------------------------------------------------------------
.............................GTGCTCCCAGGCTTAGA............................................................................................................................................................................................................1720.500.50-----------------------------------------------------------------------------------------------------------------------0.50--
............GCCGGCGCGGAGGGGG..............................................................................................................................................................................................................................1620.500.50----------0.50---------------------------------------------------------------------------------------------------------------
..............CGGCGCGGAGGGGGCG............................................................................................................................................................................................................................1630.330.33------------------------------------------------------------------------------------------------------------------------0.33-
.....CGCGGTCGCCGGCGC......................................................................................................................................................................................................................................1540.250.25----------------------------------------------------------0.25---------------------------------------------------------------
.....................................................................................................................................................................................................................CGCGGGCTCGGGGCG......................1550.200.20-------------------------------------------------------------------------------------------------------------------------0.20
..................................................................................................TAGACTGAGACTTTC.........................................................................................................................................1590.110.11-----------------------------------------------------------0.11--------------------------------------------------------------

Antisense strand
CGACCCGCGGTCGCCGGCGCGGAGGGGGCGTGCTCCCAGGCTTAGAAACAGTGAGGGAGAGCAAATTCGCGCACCTGATGTCTGCTTAAGCTACCTGCTAGACTGAGACTTTCTGCGAAGCCGGCGTGTCTGCGAGCAGCACTCGCTAAGGCTCTGCGTTTAACAGACACTACCTTTGGGAAGGCGCTTATCACAAAAAGTCCCTGCCCTTCTCGCGGGCTCGGGGCGCAACCCTGACAAATCGGGCAGC
..............................................................................................(((.(((((..((.....))(((.((((((((.(((((....))).)).))))..)))).)))))))).)))....................................................................................
.........................................................................................90...........................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		GSE20417(GSM514985)
Colon and lung cancer pool. 		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR040037(GSM532922)
G243T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577739(Rovira)
total RNA. (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR191424(GSM715534)
138genomic small RNA (size selected RNA from . (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM532879(GSM532879)
G659N. (cervix)		GSM532887(GSM532887)
G761N. (cervix)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR029131(GSM416760)
MCF7. (cell line)		SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
...........CGCCGGCGCGGAGGGG............................................................................................................................................................................................................................... 163.000.00----------2.00---------------------------------------------1.00-----------------------------------------------------------------
...............................................................................................................................................................................................................CCCGAGCCCGCGAGAAGG......................... 1812.002.00-----------------------------------2.00--------------------------------------------------------------------------------------
.........GTCGCCGGCGCGGAGGGTAT............................................................................................................................................................................................................................. 201.000.00------------------------------1.00-------------------------------------------------------------------------------------------
...........CGCCGGCGCGGAGGGT............................................................................................................................................................................................................................... 161.000.00----------1.00---------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CTCGCGGGCTCGGGGGGGG.................... 191.000.00---------------------------------1.00----------------------------------------------------------------------------------------
.............CCGGCGCGGAGGGGGGGA........................................................................................................................................................................................................................... 181.000.00----------1.00---------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CCCGATTTGTCAGGGTTGCG.... 2011.001.00---1.00----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CTCGCGGGCTCGGGGGGG..................... 181.000.00--------------------------------------------------------------------------------------------------------------------1.00-----
..........................................................................................................GACACGCCGGCTTCGCAGAAAGTC........................................................................................................................ 2411.001.00-----------1.00--------------------------------------------------------------------------------------------------------------
............................TCTAAGCCTGGGAGCACG............................................................................................................................................................................................................ 1811.001.00-------------------------------1.00------------------------------------------------------------------------------------------
..........CCCTCCGCGCCGGCGA................................................................................................................................................................................................................................ 1620.500.50----------0.50---------------------------------------------------------------------------------------------------------------