ID: uc001kdp.2_intron_0_0_chr10_88414685_f.5p
GENE: (1)
chr10:88414635-88414884+


(4)
B-CELL
(11)
BRAIN
(11)
BREAST
(16)
CELL-LINE
(1)
FIBROBLAST
(2)
HEART
(2)
LIVER
(1)
OTHER
(4)
SKIN
(2)
UTERUS

Sense strand
CCCAGAGCAGCATCTCCAGCCTGGGCCGGCTTCCATCCATCAGTCCCACAGTAAGCCTGGGCGAGCATGTGCATGCACAGAGCCTTCCCTGACCCCTTCCTGGTCCCCTCCTGGCCACACACAGGGGCTTTGACAGGGAGATAGAAAAGGTCTGAACTCTGCTGTGGGGCCTTGAGCCATTACTGGACCTCTCTGAGCCCGCCCCTGATAAACAGGCTGATAGAGGAGGGTGCAGGCAATGTCCTTCCTC
...................................................................................................(((.((((((((((........))))))........))))..)))..........................................................................................................
...................................................................................................100.........................................................159.........................................................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR189784SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577580(Rovira)
total RNA. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577453(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
......................................................................................................................................AGGGAGATAGAAAAGGTCTTG...............................................................................................21140.002.003.003.003.003.003.00-3.002.003.00-2.00--1.001.001.00------1.001.001.001.00----1.00----1.00----1.001.001.00-1.00-1.001.00--------
......................................................................................................................................AGGGAGATAGAAAAGGTCTTGA..............................................................................................22112.002.007.001.00-1.00----1.00--------1.00----1.00---------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTTGT..............................................................................................22111.002.00-1.00-1.00-1.00------2.00------2.00-------1.00---------1.001.001.00----------------
......................................................................................................................................AGGGAGATAGAAAAGGTATTG...............................................................................................215.000.00----1.001.00-----1.00--1.00------1.00----------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTT................................................................................................2015.002.003.00------------1.00--------------------1.00---------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTTGTT.............................................................................................2315.002.00--1.00-1.00-----------1.00---------------1.00----------1.00------------
......................................................................................................................................AGGGAGATAGAAAAGGTGTTG...............................................................................................213.000.00-----1.00----1.00----------1.00----------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCT.................................................................................................1912.002.00-1.00----1.00-------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCGTGT..............................................................................................222.000.00----------------1.00---------1.00-----------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTTTTG...............................................................................................212.000.00---------------1.00--------------------------------1.00-------
......................................................................................................................................AGGGAGATAGAAAAGGACTT................................................................................................202.000.001.00-------------------1.00-----------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCGTG...............................................................................................212.000.00--1.00--1.00--------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGCG..................................................................................................181.000.00-1.00------------------------------------------------------
.......................................................................................................................................GGGAGATAGAAAAGGTCTTG...............................................................................................201.000.00-------------------------------1.00------------------------
........................................................................................................CCCCTCCTGGCCACAAAAG...............................................................................................................................191.000.00---------1.00----------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTTT...............................................................................................2111.002.00---1.00----------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTGTA..............................................................................................221.000.00-------1.00------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTTGAA.............................................................................................2311.002.001.00-------------------------------------------------------
.......................................................................................................................................GGGAGATAGAAAAGGTCTGAACTCTG.........................................................................................2611.001.00-----------------------------1.00--------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTGTGG...............................................................................................211.000.00-----------------1.00--------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTAGTG...............................................................................................211.000.00--------------------1.00-----------------------------------
.......................................................................................................................................................................................TGGACCTCTCTGAGCTCTG................................................191.000.00--------------------------------------------------1.00-----
............................................................................................................................................................................................CTCTCTGAGCCCGCCCCTG...........................................1911.001.00----------------------------1.00---------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTGTT................................................................................................201.000.001.00-------------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTAG...............................................................................................2111.002.00--1.00-----------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTTGC..............................................................................................2211.002.00-1.00------------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCATG...............................................................................................211.000.00---------------------------------------------1.00----------
......................................................................................................................................AGGGAGATAGAAAAGGTGATG...............................................................................................211.000.00--1.00-----------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTGC...............................................................................................211.000.00-----1.00--------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCTTTTT.............................................................................................2311.002.00-----------1.00--------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTTT.................................................................................................191.000.00--1.00-----------------------------------------------------
.....................................................................................................................................CAGGGAGATAGAAAAGGTTTG................................................................................................211.000.00-1.00------------------------------------------------------
..............................................................................................................................................................CTGCTGTGGGGCCTTCCCT.........................................................................191.000.00---------------------------------1.00----------------------
......................................................................................................................................AGGGAGATAGAAAAGGAATT................................................................................................201.000.00-----------1.00--------------------------------------------
.......................................................................................................................................GGGAGATAGAAAAGGTCTTGA..............................................................................................211.000.00-------1.00------------------------------------------------
......................................................................................................................................AGGGAGATAGAAAAGGTCGTT...............................................................................................211.000.00---1.00----------------------------------------------------
....................................................................................................................................................GGTCTGAACTCTGCTGTG....................................................................................1830.330.33----------------------------------------------------0.33---
.........................................................................................................................CAGGGGCTTTGACAG..................................................................................................................1570.140.14-----------------------------------------------------0.14--
...................CCTGGGCCGGCTTCC........................................................................................................................................................................................................................1590.110.11-----------------------------------------------------0.11--
................................................................................................................................TTTGACAGGGAGATA...........................................................................................................1590.110.11-------------------------------------------------------0.11

Antisense strand
CCCAGAGCAGCATCTCCAGCCTGGGCCGGCTTCCATCCATCAGTCCCACAGTAAGCCTGGGCGAGCATGTGCATGCACAGAGCCTTCCCTGACCCCTTCCTGGTCCCCTCCTGGCCACACACAGGGGCTTTGACAGGGAGATAGAAAAGGTCTGAACTCTGCTGTGGGGCCTTGAGCCATTACTGGACCTCTCTGAGCCCGCCCCTGATAAACAGGCTGATAGAGGAGGGTGCAGGCAATGTCCTTCCTC
...................................................................................................(((.((((((((((........))))))........))))..)))..........................................................................................................
...................................................................................................100.........................................................159.........................................................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR189784SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577580(Rovira)
total RNA. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577453(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
.............CTCCAGCCTGGGCCGGCTGGC........................................................................................................................................................................................................................ 212.000.00------------------2.00-------------------------------------
.............................................................................................CCCTTCCTGGTCCCCTCTA.......................................................................................................................................... 191.000.00---------1.00----------------------------------------------
...........ATCTCCAGCCTGGGCCA.............................................................................................................................................................................................................................. 171.000.00-------------------------------------------------1.00------
.......CAGCATCTCCAGCCTGTG................................................................................................................................................................................................................................. 181.000.00------------------------------------1.00-------------------
....................................CCATCAGTCCCACAGTA..................................................................................................................................................................................................... 171.000.00-----------------------1.00--------------------------------
..................................................................................................CCTGGTCCCCTCCTGTCAG..................................................................................................................................... 191.000.00---------1.00----------------------------------------------
...........................................................................................................................TCCCTGTCAAAGCCCC............................................................................................................... 1630.330.33---------------------------------------------------0.33----
......................................................................................CCAGGAAGGGGTCAGGG................................................................................................................................................... 1740.250.25------------------------------------------------------0.25-