ID: uc001kdi.1_intron_0_0_chr10_86153699_f.5p
GENE: FAM190B(1)
chr10:86153649-86153898+


(4)
AGO2.ip
(2)
BREAST
(10)
CELL-LINE
(1)
HELA
(1)
LIVER
(2)
OTHER
(2)
SKIN

Sense strand
GGTCCTAATGTAGGTAAATAGAAATCTCAAACTGATATTGATACTTTCAGGTATGCTTTGACATTGAGTTACAAAATTTGAACGAATAGAAGGGAGCTACTCCAACTCCAGTAGTGAATCTTCCATGTACATTTAATTATCAGTATAGATCTTTTTGTCCTATTAATATAACTTTTAGGTGTGAAGAAAAGTTTAAATGTATGAAATGTAGTTGTTGTGATTCTTTAAACATAATTATATTTTTCTTCAT
...........................................................((((..(((....................(((((..((((((........))))))...)))))..(((((............)))))...)))..))))...........................................................................................
.......................................................56............................................................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189782GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
............................................................ACATTGAGTTACAAAATTTTATG.......................................................................................................................................................................23150.001.0043.003.00-1.00-2.00--------1.00---
.............................................................CATTGAGTTACAAAATTTTATG.......................................................................................................................................................................224.000.00--1.001.00----1.00---1.00-----
............................................................ACATTGAGTTACAAAATTTT..........................................................................................................................................................................2014.001.00--1.00-2.001.00------------
..............................................................ATTGAGTTACAAAATTTTA.........................................................................................................................................................................192.000.00--1.00---1.00-----------
..............................................................ATTGAGTTACAAAATTTTAT........................................................................................................................................................................202.000.00---1.00--1.00-----------
............................................................ACATTGAGTTACAAAATTT...........................................................................................................................................................................1911.001.00----1.00-------------
...........................................................................................................................................................................................................................ATTCTTTAAACATAATTATATTTTTCTTCATCC331.000.00-----------------1.00
...................................................................................................................................................................................................................................AACATAATTATATTTTTATAT..211.000.00-----------1.00------
............................................................ACATTGAGTTACAAAATTTTA.........................................................................................................................................................................2111.001.00--------1.00---------
............................................................ACATTGAGTTACAAAATT............................................................................................................................................................................1811.001.00------1.00-----------
....................................................ATGCTTTGACATTGAACC....................................................................................................................................................................................181.000.00---------1.00--------
.............................................................CATTGAGTTACAAAATTTTA.........................................................................................................................................................................201.000.00--1.00---------------
............................................................................................................................................CAGTATAGATCTTTTTGTCCTG........................................................................................221.000.00-------------1.00----
............................................................ACATTGAGTTACAAAATTTA..........................................................................................................................................................................2011.001.00-1.00----------------
................................................................TGAGTTACAAAATTTGAACGAATAGAAGGG............................................................................................................................................................3011.001.00---------------1.00--
............................................................ACATTGAGTTACAAAAT.............................................................................................................................................................................1720.500.50---0.50--------------

Antisense strand
GGTCCTAATGTAGGTAAATAGAAATCTCAAACTGATATTGATACTTTCAGGTATGCTTTGACATTGAGTTACAAAATTTGAACGAATAGAAGGGAGCTACTCCAACTCCAGTAGTGAATCTTCCATGTACATTTAATTATCAGTATAGATCTTTTTGTCCTATTAATATAACTTTTAGGTGTGAAGAAAAGTTTAAATGTATGAAATGTAGTTGTTGTGATTCTTTAAACATAATTATATTTTTCTTCAT
...........................................................((((..(((....................(((((..((((((........))))))...)))))..(((((............)))))...)))..))))...........................................................................................
.......................................................56............................................................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189782GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................ATTGATACTTTCAGGTATTT.................................................................................................................................................................................................. 201.000.00-------1.00----------
.................................................................................................TACTCCAACTCCAGTAGA....................................................................................................................................... 181.000.00----------------1.00-
.................................................................................................TACTCCAACTCCAGTACGG...................................................................................................................................... 191.000.00----------1.00-------
.................................................................................................TACTCCAACTCCAGTAG........................................................................................................................................ 171.000.00-------1.00----------