ID: uc001jro.2_intron_14_0_chr10_73056500_f.3p
GENE: (15)
chr10:73057466-73057715+


(2)
B-CELL
(2)
BRAIN
(2)
BREAST
(9)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(1)
LIVER
(2)
OTHER
(12)
SKIN
(1)
UTERUS

Sense strand
AGGCCTGAAGGGTGGCCATGCAGGCCTTGCCCTTGGGAACCGACCCTTCAAGGGAGAAGCCCCTGCCTGAACAGTGGGAGTCTGTCCAGAGGAGGTGGGAGTGACTCAAGGCTCAATGAGCTCACAGTCCAAGGGGAGGGAGGCTGGAGGGCAGATGCCCAGCACTGTGCCCCTCTCACTCTTGGCCCCCACCCTTGCAGACACCTGCTGGCTCCCTGGACACTCTCTGCTCTGCCCCTGGCAGCACTGT
.............................................................................(((((..((((.......))))...)))))..(((((...))))).....(((....))).................................................................................................................
...........................................................................76...........................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR040042(GSM532927)
G428N. (cervix)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR037937(GSM510475)
293cand2. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR189783SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR189785SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
..................................................................................................................AATGAGCTCACAGTCTATT.....................................................................................................................1928.000.0016.00---2.00----2.002.00---1.00-1.001.00--1.00-1.00--------1.00-----------
..................................................................................................................AATGAGCTCACAGTCCATTG....................................................................................................................204.000.002.00-----1.00-----1.00------------------------------
................................................................................................................TCAATGAGCTCACAGTCTAG......................................................................................................................203.000.002.001.00-----------------------------------------
.......................................................................................................................................................................................................GACACCTGCTGGCTCCCTGGA..............................2113.003.00--3.00----------------------------------------
..........................................................................................................................................................................................................ACCTGCTGGCTCCCTGGACAC...........................2112.002.00--------2.00----------------------------------
................................................................................................................................CCAAGGGGAGGGAGGC..........................................................................................................1681.121.12-----------0.12-------------------------0.380.25-0.120.120.12
................................................................................................................TCAATGAGCTCACAGTGTAT......................................................................................................................201.000.00---1.00---------------------------------------
.......................................................................................................................................................................................................................CTGGACACTCTCTGCTCTG................1911.001.00-1.00-----------------------------------------
................................................................................................................TCAATGAGCTCACAGTCTAA......................................................................................................................201.000.001.00------------------------------------------
..................................................................................................................AATGAGCTCACAGTCCATTGA...................................................................................................................211.000.00------1.00------------------------------------
................................................................................................................TCAATGAGCTCACAGTATAT......................................................................................................................201.000.001.00------------------------------------------
.............................................................................................................................................................................................................TGCTGGCTCCCTGGACACTCTCTG.....................2411.001.00-----------------------------1.00-------------
...............................................................................................................................................................................................................CTGGCTCCCTGGACACTC.........................1811.001.00-----------1.00-------------------------------
................................................................................TCTGTCCAGAGGAGGAGCC.......................................................................................................................................................191.000.00---------------1.00---------------------------
......................................................................................................................................................................................................AGACACCTGCTGGCTCCCTGGA..............................2211.001.00-----------------------1.00-------------------
................................................................................................................TCAATGAGCTCACAGCTAC.......................................................................................................................191.000.00---------------------1.00---------------------
......................................................................................................................AGCTCACAGTCCAAGGACC.................................................................................................................191.000.00-------------------1.00-----------------------
..................................................................................................................AATGAGCTCACAGTCTGAG.....................................................................................................................191.000.00----------------------------1.00--------------
.................................................................................................GGAGTGACTCAAGGCTCAATGAGC.................................................................................................................................2411.001.00-----1.00-------------------------------------
...........................................................................................................................................GAGGCTGGAGGGCAGATAA............................................................................................191.000.00---------------------------------1.00---------
..............................................................................AGTCTGTCCAGAGGAGGTGGGAGCGAC.................................................................................................................................................271.000.00------------------------1.00------------------
...................................................................................................................................AGGGGAGGGAGGCTGGATGAG..................................................................................................211.000.00-------------1.00-----------------------------
.......................................................................................................................................................................TGCCCCTCTCACTCTTGGCC...............................................................2011.001.00-------------------------1.00-----------------
.................................................................................................................CAATGAGCTCACAGTCTATT.....................................................................................................................201.000.00--------------------------1.00----------------
................................................................................................................TCAATGAGCTCACAGTCTATT.....................................................................................................................211.000.00---1.00---------------------------------------
................................................................................................................TCAATGAGCTCACAGTCTAGA.....................................................................................................................211.000.00-1.00-----------------------------------------
................................................................GCCTGAACAGTGGGAGTC........................................................................................................................................................................1820.500.50------------------------------------0.50------

Antisense strand
AGGCCTGAAGGGTGGCCATGCAGGCCTTGCCCTTGGGAACCGACCCTTCAAGGGAGAAGCCCCTGCCTGAACAGTGGGAGTCTGTCCAGAGGAGGTGGGAGTGACTCAAGGCTCAATGAGCTCACAGTCCAAGGGGAGGGAGGCTGGAGGGCAGATGCCCAGCACTGTGCCCCTCTCACTCTTGGCCCCCACCCTTGCAGACACCTGCTGGCTCCCTGGACACTCTCTGCTCTGCCCCTGGCAGCACTGT
.............................................................................(((((..((((.......))))...)))))..(((((...))))).....(((....))).................................................................................................................
...........................................................................76...........................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR040042(GSM532927)
G428N. (cervix)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR037937(GSM510475)
293cand2. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR189783SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR189785SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR189786SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................................GAGCTCACAGTCCAATG.................................................................................................................... 172.000.00------------------1.00-----------1.00------------
................................................................................................................................................................................................................TGGCTCCCTGGACACTAA........................ 181.000.00-------1.00-----------------------------------
...................................................GGGAGAAGCCCCTGCGCC..................................................................................................................................................................................... 181.000.00---------------------------1.00---------------
.................................................................................................................................................................................................................GGCTCCCTGGACACTGGA....................... 181.000.00-------1.00-----------------------------------
......................................................................................................................................................................................................................CCTGGACACTCTCTGCATAA................ 201.000.00----------------------------------1.00--------
................................................................GCCTGAACAGTGGGAGTTTGT..................................................................................................................................................................... 211.000.00-----------------------------------1.00-------
.....................................................................................................................GAGCTCACAGTCCAAGTG................................................................................................................... 181.000.00--------------------------------1.00----------
....................................................................................................................................GGGGAGGGAGGCTGGAGGATAA................................................................................................ 221.000.00-----1.00-------------------------------------
.....................................................................................................................................................................................................................CAGAGAGTGTCCAGGG..................... 1660.170.17---------------------------------------0.17---