| (10) CELL-LINE | (1) CERVIX | (1) OTHER | (1) SKIN |
| GACGTGAGCCACTGTACCTGGCCTTATAAAGTATTAAATGTTCTTTAAAATGTAGAAGAGTATAAAGGAGAAAAGAAACCACCTGTCTATTGAAATACAACCACAATGTTTTGTTTTGCTTTCTTTTTTTTCTCTTTCTAATTATAGACTTAAGGGAATTCTGACACTTCTCTGAAACCCTTTTCCTCTTTCTCTCTCAGTTTGCCAGGCAGTATAGCAGGAATGAGCCCCTGACCTTTGCATGGTTACG .................................................................................................................................................(((...(((((..(((.((......)).))).)))))....)))............................................................. ...................................................................................................................116.................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR189785 | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR038856(GSM458539) D11. (cell line) | SRR040042(GSM532927) G428N. (cervix) | SRR189787 | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR189782 | SRR038859(GSM458542) MM386. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................TTCTTTTTTTTCTCTTAAAG.............................................................................................................. | 20 | 6.00 | 0.00 | - | 3.00 | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TTCTTTTTTTTCTCTTAATG.............................................................................................................. | 20 | 4.00 | 0.00 | - | 1.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TTTCTTTTTTTTCTCTTAATG.............................................................................................................. | 21 | 3.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TTTCTTTTTTTTCTCTTCCA............................................................................................................... | 20 | 3.00 | 0.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................ACCCTTTTCCTCTTTCCCAG...................................................... | 20 | 2.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | |
| .........................................................................................................ATGTTTTGTTTTGCTTTCTTTTC.......................................................................................................................... | 23 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................CTTTTTTTTCTCTTTCCAG............................................................................................................. | 19 | 2.00 | 0.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................TATTAAATGTTCTTTTGTA........................................................................................................................................................................................................ | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | |
| ....................................................................................................................TGCTTTCTTTTTTTTCGAG................................................................................................................... | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................TGCTTTCTTTTTTTTCGAGA.................................................................................................................. | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................TTGTTTTGCTTTCTTTTTGT........................................................................................................................ | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................TGTTTTGTTTTGCTTTCTGTGC.......................................................................................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................TCTTTTTTTTCTCTTTCTAGGC........................................................................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TTCTTTTTTTTCTCTTAACG.............................................................................................................. | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................AGGAATGAGCCCCTGACG.............. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ......................................................................................................................CTTTCTTTTTTTTCTCTTTCTCAG............................................................................................................ | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TTCTTTTTTTTCTCTTTAAAG............................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................CTTTCTTTTTTTTCTCAGG................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................CTTTCTTTTTTTTCTCATAG................................................................................................................ | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TTTCTTTTTTTTCTCTTTCAG.............................................................................................................. | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TTCTTTTTTTTCTCTTTCAG.............................................................................................................. | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................TTGTTTTGCTTTCTTTTTTTTTGGC................................................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................TCTTTTTTTTCTCTTTGCTC............................................................................................................. | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................CTTTCTTTTTTTTCTCTTTCTTG............................................................................................................. | 23 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................TTTTGTTTTGCTTTCTTTTTTTGGTA.................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................TTGCTTTCTTTTTTTTGAGG................................................................................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................AAGGAGAAAAGAAACTACG....................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ..............................................................................................................................TTTTTCTCTTTCTAATCTTG........................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TTCTTTTTTTTCTCTTTGGTC............................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................GTTTTGTTTTGCTTTCTGGGG.......................................................................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................TGCTTTCTTTTTTTTCTCGG.................................................................................................................. | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TTTCTTTTTTTTCTCTTTGGC.............................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................GTTTTGCTTTCTTTTTTTTTGGC................................................................................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................TTTGTTTTGCTTTCTTTTTTTTTC..................................................................................................................... | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................CTTTTTTTTCTCTTTCCCG............................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................CTTTCTTTTTTTTCTCTTTCTAATTACAG....................................................................................................... | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................TTTTGTTTTGCTTTCTTTTTTTTCCTGC.................................................................................................................. | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TTTCTTTTTTTTCTCTTCTG............................................................................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................TGTTTTGTTTTGCTTTCTTTTTTTCC...................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................TGTTTTGCTTTCTTTTTTGTTC..................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ................................................................................................................................TTTCTCTTTCTAATTTCAA....................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................TGCTTTCTTTTTTTTCTCTTTTTG.............................................................................................................. | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................TTTTGTTTTGCTTTCTTTTTTTGGGA.................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TTCTTTTTTTTCTCTTACAC.............................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TTTCTTTTTTTTCTCTTTCTAAG............................................................................................................ | 23 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................TTCTTTTTTTTCTCTTTCTTG............................................................................................................. | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................TTTTGCTTTCTTTTTTTTGTAG................................................................................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................TTTTGTTTTGCTTTCTTTTTTTCCTC.................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TTTCTTTTTTTTCTCTGGTC............................................................................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................AATTATAGACTTAAGG............................................................................................... | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |
| GACGTGAGCCACTGTACCTGGCCTTATAAAGTATTAAATGTTCTTTAAAATGTAGAAGAGTATAAAGGAGAAAAGAAACCACCTGTCTATTGAAATACAACCACAATGTTTTGTTTTGCTTTCTTTTTTTTCTCTTTCTAATTATAGACTTAAGGGAATTCTGACACTTCTCTGAAACCCTTTTCCTCTTTCTCTCTCAGTTTGCCAGGCAGTATAGCAGGAATGAGCCCCTGACCTTTGCATGGTTACG .................................................................................................................................................(((...(((((..(((.((......)).))).)))))....)))............................................................. ...................................................................................................................116.................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR189785 | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR038856(GSM458539) D11. (cell line) | SRR040042(GSM532927) G428N. (cervix) | SRR189787 | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR189782 | SRR038859(GSM458542) MM386. (cell line) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................AGAAGAGTATAAAGGAGAAGAA............................................................................................................................................................................... | 22 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................TGTAGAAGAGTATAACTTT..................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..CGTGAGCCACTGTACCTGGCCTCCGT.............................................................................................................................................................................................................................. | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................................ACCTTTGCATGGTTAAGCA | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ............................................TTAAAATGTAGAAGAGCTG........................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ............................................TTAAAATGTAGAAGAGTTTC.......................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................GGAATTCTGACACTTCTTTC............................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |