ID: uc001jom.1_intron_0_0_chr10_70481040_f.5p
GENE: CCAR1(1)
chr10:70480990-70481239+


(15)
B-CELL 		(1)
BRAIN 		(13)
BREAST 		(43)
CELL-LINE 		(10)
CERVIX 		(1)
FIBROBLAST 		(5)
HEART 		(5)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(3)
OTHER 		(2)
RRP40.ip 		(21)
SKIN 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
AAAGCTGACGGGTTTGAAATGGCTTCGATGTTAGCCGGGACCCGACTCAGGTGAAGGTCTGGTCCCCGTAGTTGGAGCAGTGGGCGGCCAAGCCGGGTCTCTTAACATCTTGTCGAATCTGTGGAAGGGCCGGGAGCGATCTTTTGGGTAGCCCGGCGGCCCCGGGCGGCGACGGTGGGGCTCTTGTGGGACTGGGACGGGAGGGACGCGGTCCCTTTTGTGCGGGTCGGAGCAGGCCCGGCGCGGCCAG
...........................................................(((((((((..((....))..)))).)))))...(((((.((...((.....)).))))))).................................................................................................................................
...........................................................60...............................................................125...........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR040030(GSM532915)
G013N. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
..........GGTTTGAAATGGCTTCGATGTTAGCC......................................................................................................................................................................................................................26123.0023.00--22.00-----------------------------------------------------------------------------------------------------1.00--------------------
..........GGTTTGAAATGGCTTCGATG............................................................................................................................................................................................................................2018.008.00--------4.00----4.00---------------------------------------------------------------------------------------------------------------
......GACGGGTTTGAAATGGCTT.................................................................................................................................................................................................................................1918.008.00----2.001.00-------------------------------------1.00------------------------1.00------------------------------------1.00--1.00--------1.00-------
....CTGACGGGTTTGAAATGG....................................................................................................................................................................................................................................1815.005.00---1.00--3.00--------------------------------------------------------------------------------------------1.00-------------------------
................................................................CCCGTAGTTGGAGCAGTGGGCG....................................................................................................................................................................2215.005.00----------------1.00--1.00-----------------1.00-----1.00----1.00----------------------------------------------------------------------------
......................CTTCGATGTTAGCCGGGACC................................................................................................................................................................................................................2015.005.00----1.00-1.00-------------------------------------------1.00------1.00-------------1.00-----------------------------------------------------
...............................TAGCCGGGACCCGACTCAGG.......................................................................................................................................................................................................2014.004.00---3.001.00------------------------------------------------------------------------------------------------------------------------
...........GTTTGAAATGGCTTCGATGTTAGCCGG....................................................................................................................................................................................................................2714.004.00--3.00-----------------------------------------------------------------------------1.00--------------------------------------------
.....TGACGGGTTTGAAATGGCTTCGATGTTAG........................................................................................................................................................................................................................2914.004.00--4.00--------------------------------------------------------------------------------------------------------------------------
....CTGACGGGTTTGAAATGGCT..................................................................................................................................................................................................................................2014.004.00---3.00-----------------------1.00-------------------------------------------------------------------------------------------------
................................................AGGTGAAGGTCTGGTCCCCG......................................................................................................................................................................................2014.004.00----1.00---------1.00------------------------------------------------------------------------------1.00------------------------1.00------
..........................GATGTTAGCCGGGACCCGACTCAGG.......................................................................................................................................................................................................2514.004.00----------4.00------------------------------------------------------------------------------------------------------------------
...................................CGGGACCCGACTCAGGTGAAG..................................................................................................................................................................................................2113.003.00---1.00------------------------------1.00-----------------------------------------1.00------------------------------------------------
.......ACGGGTTTGAAATGGCTT.................................................................................................................................................................................................................................1813.003.00-----------1.00----------1.00------------------------1.00-----------------------------------------------------------------------------
.......................TTCGATGTTAGCCGGGACCC...............................................................................................................................................................................................................2013.003.00---------------------------------------1.00--------------1.00------------------------------------------1.00---------------------------
......GACGGGTTTGAAATGGCTTCG...............................................................................................................................................................................................................................2113.003.00--------------------2.00-----1.00--------------------------------------------------------------------------------------------------
......GACGGGTTTGAAATGGCT..................................................................................................................................................................................................................................1813.003.00----1.00---------------------1.00--------------------------------------------------------------1.00-----------------------------------
....CTGACGGGTTTGAAATGGCTTCG...............................................................................................................................................................................................................................2313.003.00---------------1.00-1.00--------------------------------------1.00--------------------------------------------------------------------
...........................................................................................................................................................................................GGGACTGGGACGGGAGGGAC...........................................2013.003.00------3.00----------------------------------------------------------------------------------------------------------------------
...................................CGGGACCCGACTCAGGTGAAGGT................................................................................................................................................................................................2313.003.00---------------------------------------------------------------------------------1.00----1.00---1.00----------------------------------
........................................................................................................ACATCTTGTCGAATCTG.................................................................................................................................1713.003.00-------3.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GTCCCTTTTGTGCGGGTCGGAGC.................2313.003.00---3.00-------------------------------------------------------------------------------------------------------------------------
....................................GGGACCCGACTCAGGTGAAGG.................................................................................................................................................................................................2113.003.00----3.00------------------------------------------------------------------------------------------------------------------------
....CTGACGGGTTTGAAATGGCTTCGA..............................................................................................................................................................................................................................2413.003.00----2.001.00-----------------------------------------------------------------------------------------------------------------------
..........GGTTTGAAATGGCTTCGATGTTAGCCG.....................................................................................................................................................................................................................2713.003.00------------------------3.00----------------------------------------------------------------------------------------------------
.......................TTCGATGTTAGCCGGGAC.................................................................................................................................................................................................................1813.003.00-------2.00-------------------1.00-------------------------------------------------------------------------------------------------
......GACGGGTTTGAAATGGCTTC................................................................................................................................................................................................................................2013.003.00----------------2.00------------------------------------------------------------------------------------------------------1.00-----
................................................AGGTGAAGGTCTGGTCCC........................................................................................................................................................................................1813.003.00--------------------------1.00--------------2.00-----------------------------------------------------------------------------------
................................................AGGTGAAGGTCTGGTCC.........................................................................................................................................................................................1712.002.00-----------2.00-----------------------------------------------------------------------------------------------------------------
......GACGGGTTTGAAATGGCTTCGATG............................................................................................................................................................................................................................2412.002.00---2.00-------------------------------------------------------------------------------------------------------------------------
...GCTGACGGGTTTGAAATGG....................................................................................................................................................................................................................................1912.002.00---------------------------1.00-----------------------------------------1.00-------------------------------------------------------
...............................................................CCCCGTAGTTGGAGCAGTGGG......................................................................................................................................................................2112.002.00---2.00-------------------------------------------------------------------------------------------------------------------------
........................................CCCGACTCAGGTGAAGGTCTG.............................................................................................................................................................................................2112.002.00-----------------------------1.00--------------------1.00--------------------------------------------------------------------------
..............................................................................................................................................................................................ACTGGGACGGGAGGGACGCG........................................2012.002.00--------------------------------2.00--------------------------------------------------------------------------------------------
...............................................................CCCCGTAGTTGGAGCAGTGGGCG....................................................................................................................................................................2312.002.00---------------------------------1.00------------------1.00------------------------------------------------------------------------
........................TCGATGTTAGCCGGGACC................................................................................................................................................................................................................1812.002.00-----------------------------------------------------------------------------------------------1.00----------------1.00------------
...................................................................GTAGTTGGAGCAGTGGG......................................................................................................................................................................1712.002.00----2.00------------------------------------------------------------------------------------------------------------------------
................................................................CCCGTAGTTGGAGCAGTGGG......................................................................................................................................................................2012.002.00----1.00----------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................GTGGAAGGGCCGGGAGCGA...............................................................................................................1912.002.00---2.00-------------------------------------------------------------------------------------------------------------------------
......GACGGGTTTGAAATGGCTTCGATGTTAGCCGGGA..................................................................................................................................................................................................................3412.002.00-----------------------------------------------------------------1.00------------------------------------------------------1.00----
.........................................................................................................................................................................................GTGGGACTGGGACGGGAGGG.............................................2012.002.00-------------------------------------------------------------------------1.00-----------------------------------1.00---------------
.....................GCTTCGATGTTAGCCGGGACC................................................................................................................................................................................................................2112.002.00----------------------------------------------1.00------------------------------------------------------------------1.00-----------
...................................................................................................................AATCTGTGGAAGGGCCGGGAGCGATC.............................................................................................................2612.002.00---2.00-------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GTGGGACTGGGACGGGAGGGA............................................2112.002.00--------------------------------------------2.00--------------------------------------------------------------------------------
.......................TTCGATGTTAGCCGGGACCCG..............................................................................................................................................................................................................2112.002.00---------------------------------------------1.00----------------------------------------------------------------------------1.00--
.........................CGATGTTAGCCGGGACCCGACTCAGGTGAAGGT................................................................................................................................................................................................3312.002.00-----2.00-----------------------------------------------------------------------------------------------------------------------
........................................CCCGACTCAGGTGAAGGT................................................................................................................................................................................................1812.002.00--------------------------------------------------------------------------------------------1.00-----1.00--------------------------
..........................GATGTTAGCCGGGACCCGACTCAGGT......................................................................................................................................................................................................2612.002.00-----------------2.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................GCCCCGGGCGGCGACGTCGC........................................................................202.000.001.001.00---------------------------------------------------------------------------------------------------------------------------
......GACGGGTTTGAAATGGCTTT................................................................................................................................................................................................................................2012.008.00----------------------------------------2.00------------------------------------------------------------------------------------
....................................................................TAGTTGGAGCAGTGGGCGGCCAAGCCGGGTCCC.....................................................................................................................................................331.000.00---------------------1.00-------------------------------------------------------------------------------------------------------
.....................GCTTCGATGTTAGCCGG....................................................................................................................................................................................................................1711.001.00-------------------------------------------------------------------------------------------------------1.00---------------------
..........................................................CTGGTCCCCGTAGTTGGAG.............................................................................................................................................................................1911.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................CTGTGGAAGGGCCGGGAGCGA...............................................................................................................2111.001.00---------------1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................TAACATCTTGTCGAATCTGTGGAAGGGCCGGG....................................................................................................................3211.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------
......................................................................GTTGGAGCAGTGGGCGGCCAAGCCGGGTCTCTTAAC................................................................................................................................................3611.001.00-------------------------------------------------------------------------------------------------------------------------1.00---
...................................................................GTAGTTGGAGCAGTGGGCGT...................................................................................................................................................................2011.001.00------------------------------------------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................GCGGCCCCGGGCGGCCGCG............................................................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------
.........................CGATGTTAGCCGGGACCCGACT...........................................................................................................................................................................................................2211.001.00------1.00----------------------------------------------------------------------------------------------------------------------
.......................TTCGATGTTAGCCGGGA..................................................................................................................................................................................................................1711.001.00-------------------------------------------------------------------------------------------------------------------1.00---------
...................................................................GTAGTTGGAGCAGTGGGCG....................................................................................................................................................................1911.001.00----------------------------------------------------------1.00------------------------------------------------------------------
.....................................................................................................................TCTGTGGAAGGGCCGGGAGCGATC.............................................................................................................2411.001.00------------------------------------------------------------------------------------1.00----------------------------------------
.......................TTCGATGTTAGCCGGGACC................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------1.00---------------------------------------------------------------
........CGGGTTTGAAATGGCTTCGAT.............................................................................................................................................................................................................................2111.001.00---------------------------------------------------1.00-------------------------------------------------------------------------
..............................TTAGCCGGGACCCGACTCAGGT......................................................................................................................................................................................................2211.001.00----------------------------------1.00------------------------------------------------------------------------------------------
...........GTTTGAAATGGCTTCGATG............................................................................................................................................................................................................................1911.001.00---1.00-------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CTGGGACGGGAGGGACGCGGAA.....................................2211.001.00-------------------------------1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GTGGGACTGGGACGGGAG...............................................1811.001.00--------------1.00--------------------------------------------------------------------------------------------------------------
.............................................CTCAGGTGAAGGTCTGGTC..........................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------1.00---------------------------------------------
.....................................................................................................TTAACATCTTGTCGAATCTGTGG..............................................................................................................................2311.001.00-----------------------1.00-----------------------------------------------------------------------------------------------------
..........GGTTTGAAATGGCTTCGA..............................................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------1.00---------------------------------------------------------
................................................AGGTGAAGGTCTGGTCCCCGTAG...................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------------1.00---------------------------------
..........GGTTTGAAATGGCTTCGATGTTAGC.......................................................................................................................................................................................................................2511.001.00-------------------------1.00---------------------------------------------------------------------------------------------------
......................CTTCGATGTTAGCCGGGAC.................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------------1.00---------------------------------------
.........................CGATGTTAGCCGGGACCC...............................................................................................................................................................................................................1811.001.00-----------------------------------1.00-----------------------------------------------------------------------------------------
.............................GTTAGCCGGGACCCGACTCAG........................................................................................................................................................................................................2111.001.00-------------------------------------1.00---------------------------------------------------------------------------------------
......................CTTCGATGTTAGCCGGGACCCA..............................................................................................................................................................................................................221.000.00---------------------------------------------------------------------------------------1.00-------------------------------------
...........................ATGTTAGCCGGGACCCGAC............................................................................................................................................................................................................1911.001.00----------------------------------------------------1.00------------------------------------------------------------------------
..................ATGGCTTCGATGTTAGCCGGGAC.................................................................................................................................................................................................................2311.001.00-----------------------------------------------------------------------------------1.00-----------------------------------------
.......................................................................................................................................................................................TTGTGGGACTGGGACGGGAGGGACGCGCCCC....................................311.000.00------------1.00----------------------------------------------------------------------------------------------------------------
.....................................GGACCCGACTCAGGTGAAGGT................................................................................................................................................................................................2111.001.00----1.00------------------------------------------------------------------------------------------------------------------------
.................................GCCGGGACCCGACTCAG........................................................................................................................................................................................................1711.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------
............................................................................................................................AAGGGCCGGGAGCGATCTTT..........................................................................................................2011.001.00--------------------------------------1.00--------------------------------------------------------------------------------------
.......................................................................................................................................................................................TTGTGGGACTGGGACGGGAGGGACGCGGCCCC...................................321.000.00---------------------1.00-------------------------------------------------------------------------------------------------------
...................................................................................................................AATCTGTGGAAGGGCCGGGAGCGATCTT...........................................................................................................2811.001.00----1.00------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CTTGTGGGACTGGGACGGGAG...............................................2111.001.00-----------------------------------------------------------------------------------------------------1.00-----------------------
.....................................................................AGTTGGAGCAGTGGGCGGCCAAGCCGGGCC.......................................................................................................................................................301.000.00------------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................AGTTGGAGCAGTGGGCGGCCAAGCCGGGCCTC.....................................................................................................................................................321.000.00------------1.00----------------------------------------------------------------------------------------------------------------
...GCTGACGGGTTTGAAATGGCA..................................................................................................................................................................................................................................211.000.00------------------------------------------------------------------------------------------------1.00----------------------------
...............................................................................................................................................................................................CTGGGACGGGAGGGACGCGG.......................................2011.001.00---------------------------------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................CGGGCGGCGACGGTGGG.......................................................................1711.001.00------------------------------------------------------------------------------------------------------1.00----------------------
....................................................................................................................................................................................CTCTTGTGGGACTGGGACGGGAGG..............................................2411.001.00-------------------------1.00---------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CTGGGACGGGAGGGACGCGGT......................................2111.001.00---------------------------------------------1.00-------------------------------------------------------------------------------
..........................................................................................................ATCTTGTCGAATCTGTGGAAGGGCCGGG....................................................................................................................2811.001.00----1.00------------------------------------------------------------------------------------------------------------------------
..........GGTTTGAAATGGCTTCGATGTTAGCCGG....................................................................................................................................................................................................................2811.001.00----------------------------1.00------------------------------------------------------------------------------------------------
....................................................................................................................ATCTGTGGAAGGGCCGGGAG..................................................................................................................2011.001.00----1.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GCTCTTGTGGGACTGGGA.....................................................1811.001.00-------1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGGAGCGATCTTTTGG.......................................................................................................1711.001.00-----------------------------------------------------------------------------1.00-----------------------------------------------
..............................................TCAGGTGAAGGTCTGGTCCC........................................................................................................................................................................................2011.001.00----------------------------------------------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................CTGGGACGGGAGGGACGCGGTA.....................................2211.001.00-------------------------------------------------------1.00---------------------------------------------------------------------
..........GGTTTGAAATGGCTTCGAGG............................................................................................................................................................................................................................2011.001.00--------1.00--------------------------------------------------------------------------------------------------------------------
.....................GCTTCGATGTTAGCCGGGAC.................................................................................................................................................................................................................2011.001.00-----------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................TAGTTGGAGCAGTGGGCG....................................................................................................................................................................1811.001.00-----------------------------------------------------1.00-----------------------------------------------------------------------
................................................................................................................................................TGGGTAGCCCGGCGGG..........................................................................................161.000.00-------------------------------1.00---------------------------------------------------------------------------------------------
...GCTGACGGGTTTGAAATGGCTTCGATGTTAG........................................................................................................................................................................................................................3111.001.00----------------------------------------------------------------------------------------1.00------------------------------------
.............................................................................CAGTGGGCGGCCAAGCCGG..........................................................................................................................................................1911.001.00-------------------------------------------------------1.00---------------------------------------------------------------------
...............................................................................................................GTCGAATCTGTGGAAGGGCCG......................................................................................................................2111.001.00---1.00-------------------------------------------------------------------------------------------------------------------------
......................CTTCGATGTTAGCCGGGA..................................................................................................................................................................................................................1811.001.00------------------------------------------------------1.00----------------------------------------------------------------------
..........GGTTTGAAATGGCTTCGATGTTATCC......................................................................................................................................................................................................................261.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................GTAGTTGGAGCAGTGGGCGG...................................................................................................................................................................2011.001.00-------------------1.00---------------------------------------------------------------------------------------------------------
.....TGACGGGTTTGAAATGGCT..................................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------1.00-----------------------------------------------------------------
.......................TTCGATGTTAGCCGGGACCCGACTCAGGTGAAG..................................................................................................................................................................................................3311.001.00-----------------------1.00-----------------------------------------------------------------------------------------------------
.....................................................................AGTTGGAGCAGTGGGCGGCCAAGCCGGGGCCC.....................................................................................................................................................321.000.00---------------------1.00-------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GACTGGGACGGGAGGGACG..........................................1911.001.00---1.00-------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGGGACGGGAGGGACGCGG.......................................1911.001.00---------------------------------------------------------------------------------------------------------------------------1.00-
......GACGGGTTTGAAATGGCTTA................................................................................................................................................................................................................................2011.008.00-----------------------------1.00-----------------------------------------------------------------------------------------------
..................ATGGCTTCGATGTTAGCCGGGACCCGACTCAGG.......................................................................................................................................................................................................3311.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------
......................CTTCGATGTTAGCCGG....................................................................................................................................................................................................................1611.001.00---------------------------------------------------------------------------1.00-------------------------------------------------
.......................TTCGATGTTAGCCGGGACCCGA.............................................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------1.00----------------------------------------------
.........................................CCGACTCAGGTGAAGGT................................................................................................................................................................................................1711.001.00----------------------1.00------------------------------------------------------------------------------------------------------
..............................................................................................................TGTCGAATCTGTGGAAGGGCCGG.....................................................................................................................2311.001.00---------1.00-------------------------------------------------------------------------------------------------------------------
...............................TAGCCGGGACCCGACTC..........................................................................................................................................................................................................1711.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------
.........................CGATGTTAGCCGGGACC................................................................................................................................................................................................................1711.001.00----------------------------------------------------------------------------------------------------1.00------------------------
...........................ATGTTAGCCGGGACCCGA.............................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------1.00--------------------------------------------------
.AAGCTGACGGGTTTGAAATGGCTT.................................................................................................................................................................................................................................2411.001.00------------------------------------------------1.00----------------------------------------------------------------------------
....................GGCTTCGATGTTAGCCG.....................................................................................................................................................................................................................1711.001.00------------------------------1.00----------------------------------------------------------------------------------------------
.........................CGATGTTAGCCGGGACCCG..............................................................................................................................................................................................................1911.001.00---------------------------------------------------------------------------------------------------------------1.00-------------
..........................GATGTTAGCCGGGACCCGAC............................................................................................................................................................................................................2011.001.00---1.00-------------------------------------------------------------------------------------------------------------------------
.........................CGATGTTAGCCGGGACCCGACTC..........................................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------------------------------1.00--------
...................................................................GTAGTTGGAGCAGTGGGC.....................................................................................................................................................................1811.001.00--------------------1.00--------------------------------------------------------------------------------------------------------
..AGCTGACGGGTTTGAAATGGATT.................................................................................................................................................................................................................................231.000.00------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................................TCTCTTAACATCTTGTATCT.....................................................................................................................................201.000.00------------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................CATCTTGTCGAATCTGTGGAAGGGC........................................................................................................................2511.001.00-----------------------------------------------1.00-----------------------------------------------------------------------------
.......................................................................................................AACATCTTGTCGAATCTG.................................................................................................................................1811.001.00---------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................CCCCGTAGTTGGAGCAG..........................................................................................................................................................................1711.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------
...................TGGCTTCGATGTTAGCCGGGACCCG..............................................................................................................................................................................................................2511.001.00-------------------------------------------------1.00---------------------------------------------------------------------------
...............................................................CCCCGTAGTTGGAGCAGTGGGC.....................................................................................................................................................................2211.001.00------------------------------------1.00----------------------------------------------------------------------------------------
..........................................................CTGGTCCCCGTAGTTGG...............................................................................................................................................................................1711.001.00----------------------1.00------------------------------------------------------------------------------------------------------
...............................................................................................................................................................CCCCGGGCGGCGACGACC.........................................................................181.000.00---------------------------------------------------------------1.00-------------------------------------------------------------
...GCTGACGGGTTTGAAAT......................................................................................................................................................................................................................................1711.001.00------------------------------1.00----------------------------------------------------------------------------------------------
...........................ATGTTAGCCGGGACCCGACTCAGG.......................................................................................................................................................................................................2411.001.00----------------------------------------------------------------------1.00------------------------------------------------------
.......................TTCGATGTTAGCCGG....................................................................................................................................................................................................................1511.001.00------------------------------------------------------------------------1.00----------------------------------------------------
.................................GCCGGGACCCGACTCAGGTGAAGG.................................................................................................................................................................................................2411.001.00--------------------------------------1.00--------------------------------------------------------------------------------------
........CGGGTTTGAAATGGCTTC................................................................................................................................................................................................................................1821.001.00-------0.50---------------------0.50-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TCTTGTGGGACTGGGACG...................................................1811.001.00--------------------------------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................................GCCCGGCGGCCCCGGGCG..................................................................................1811.001.00-1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................GCGGCGACGGTGGGGGT....................................................................171.000.00------------------------------------------------------------------1.00----------------------------------------------------------
......GACGGGTTTGAAATGGC...................................................................................................................................................................................................................................1711.001.00----------------------------------------------------------------------------------1.00------------------------------------------
....................................GGGACCCGACTCAGGTGAAGGT................................................................................................................................................................................................2211.001.00----1.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................TGGGACTGGGACGGGAGGG.............................................1911.001.00----------------------------1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GTGGGACTGGGACGGGAGG..............................................1911.001.00------------------------------------------------------------------------------------------------------------------1.00----------
......GACGGGTTTGAAATGGCTTCGATGTT..........................................................................................................................................................................................................................2611.001.00----------------------------------------------------------------------------------------------------------1.00------------------
...............................TAGCCGGGACCCGACTCAGGTGAAGGT................................................................................................................................................................................................2711.001.00-------------------------------------------------1.00---------------------------------------------------------------------------
...........................................................................................................................................................................................................................GTGCGGGTCGGAGCAGGCCCGGC........2311.001.00--------------------------------------------------------------------------------------------------------------1.00--------------
......................CTTCGATGTTAGCCGGGACCCGACTC..........................................................................................................................................................................................................2611.001.00------------------------------------------------------------1.00----------------------------------------------------------------
.........................................................................................................................................................................................GTGGGACTGGGACGGGAGGGAC...........................................2211.001.00---------------------------------------------------1.00-------------------------------------------------------------------------
...GCTGACGGGTTTGAAATGGCT..................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------1.00-----------------------------------------------------------------------
.......ACGGGTTTGAAATGGCTTCG...............................................................................................................................................................................................................................2011.001.00---------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CTGGGACGGGAGGGACGCGGTC.....................................2211.001.00-------------------------1.00---------------------------------------------------------------------------------------------------
......................................................................................................................................AGCGATCTTTTGGGTAG...................................................................................................1711.001.00-------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................TCTCTTAACATCTTGTATAT.....................................................................................................................................201.000.00------------------1.00----------------------------------------------------------------------------------------------------------
.AAGCTGACGGGTTTGAAAAGG....................................................................................................................................................................................................................................211.000.00------1.00----------------------------------------------------------------------------------------------------------------------
................................................................................................................TCGAATCTGTGGAAGGGC........................................................................................................................1811.001.00------------------------------------1.00----------------------------------------------------------------------------------------
.......ACGGGTTTGAAATGGCTTC................................................................................................................................................................................................................................1911.001.00-------------------1.00---------------------------------------------------------------------------------------------------------
..................................CCGGGACCCGACTCAGA.......................................................................................................................................................................................................171.000.00-----------------------1.00-----------------------------------------------------------------------------------------------------
................................................................................TGGGCGGCCAAGCCGGGTCTCTCAAC................................................................................................................................................261.000.00------------1.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................TGTGGAAGGGCCGGGA...................................................................................................................1640.500.50------------------------------0.25---------------------------------------------------------------------------------------------0.25
.......ACGGGTTTGAAATGG....................................................................................................................................................................................................................................1520.500.50----------------------------0.50------------------------------------------------------------------------------------------------
..................................................GTGAAGGTCTGGTCCC........................................................................................................................................................................................1640.250.25---------0.25-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CTGGGACGGGAGGGA............................................1570.140.14------------------------------0.14----------------------------------------------------------------------------------------------

Antisense strand
AAAGCTGACGGGTTTGAAATGGCTTCGATGTTAGCCGGGACCCGACTCAGGTGAAGGTCTGGTCCCCGTAGTTGGAGCAGTGGGCGGCCAAGCCGGGTCTCTTAACATCTTGTCGAATCTGTGGAAGGGCCGGGAGCGATCTTTTGGGTAGCCCGGCGGCCCCGGGCGGCGACGGTGGGGCTCTTGTGGGACTGGGACGGGAGGGACGCGGTCCCTTTTGTGCGGGTCGGAGCAGGCCCGGCGCGGCCAG
...........................................................(((((((((..((....))..)))).)))))...(((((.((...((.....)).))))))).................................................................................................................................
...........................................................60...............................................................125...........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR040030(GSM532915)
G013N. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR040022(GSM532907)
G575N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
......................................................................................................................................................GCCCGGCGGCCCCGGGCG.................................................................................. 1874.000.0043.0031.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................TCCGACCCGCACAAAAGGGACC................... 2212.002.00----2.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................GGCGACGGTGGGGCTTGA................................................................. 181.000.00---------1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................CCGGCGGCCCCGGGCGC................................................................................. 171.000.00---------------------------------------1.00-------------------------------------------------------------------------------------
...................................................................................GCGGCCAAGCCGGGTAG...................................................................................................................................................... 171.000.00------------------1.00----------------------------------------------------------------------------------------------------------
.................................GCCGGGACCCGACTCGGAG...................................................................................................................................................................................................... 191.000.00----------------------------------------------------------------------------------------------1.00------------------------------
........................................................................................................................................................CCGGCGGCCCCGGGCCCG................................................................................ 181.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................CGGGCTACCCAAAAGATCGCTCCCGGC............................................................................................... 2711.001.00----------------------------------------------------------------1.00------------------------------------------------------------
.............................................................................................AGATTCGACAAGATGTTAAGAGACCCG.................................................................................................................................. 2711.001.00--------------1.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CCCACCGTCGCCGCCCGGGGCC....................................................................... 2211.001.00-----------------------------------------------------------------------------------------------------------1.00-----------------
.....................................................................................................................................................................................................................CCTTTTGTGCGGGTCGGACACC............... 221.000.00----1.00------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................GCCCGGGGCCGCCGGGC................................................................................... 1720.500.500.50----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CCCGGGGCCGCCGGGC.................................................................................... 1640.250.250.25----------------------------------------------------------------------------------------------------------------------------