ID: uc001joc.2_intron_0_0_chr10_70138428_r.3p
GENE: (11)
chr10:70138378-70138627-


(1)
B-CELL 		(2)
BRAIN 		(1)
BREAST 		(8)
CELL-LINE 		(2)
LIVER 		(1)
OTHER 		(2)
SKIN 		(1)
UTERUS

Sense strand
CAACATATGTCTTTTATCATTGCTTTCTTTGAATCTACTTATGAAAAACATAACTATTAATGCTTTATTGACATGAATATTCTTTTATTGACATCCTCTTTCTTCTTTTTTCTTTTTTGTTTTCTTTATCCCCATTTTTACATTTTGGACATTTTTATTACCTTTTTCTGTCTTTGATTTCTTTCCATTCCATTATGAAGTGACAACGATTTGTTAACTCAAACTAGGACAATTGCAATGTCATTGGTGA
...................................................................................................................................(((...........)))......................................................................................................
.....................................................................................86............................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343336SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR189785GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
..........................................................................................ACATCCTCTTTCTTCTTTTTTG..........................................................................................................................................225.000.00--2.00-2.00-1.00---------------
..........................................................................................ACATCCTCTTTCTTCTTTTTTCTTTTTTG...................................................................................................................................2913.003.00----3.00-----------------
.........................................................................................................TTTTTTCTTTTTTGTTTTCTGGTG.........................................................................................................................243.000.002.001.00--------------------
..........................................................................................ACATCCTCTTTCTTCTTTTTTCTTTTTG....................................................................................................................................282.000.00----2.00-----------------
........................................................................................................CTTTTTTCTTTTTTGTTTTCTTTTTCC.......................................................................................................................272.000.002.00---------------------
..........................................................................................ACATCCTCTTTCTTCTTTTG............................................................................................................................................202.000.00--2.00-------------------
................................................................................................TCTTTCTTCTTTTTTCTTTTTTG...................................................................................................................................2331.671.67------1.00--------------0.67
.....................................................................................................CTTCTTTTTTCTTTTTTGGTG................................................................................................................................211.000.00-1.00--------------------
..............................................................................................................................................................TACCTTTTTCTGTCTTTGATTTCTTCCC................................................................281.000.00-1.00--------------------
.............................................................................................................................................ATTTTGGACATTTTTCATT..........................................................................................191.000.00-----------1.00----------
..................................................................................................TTTCTTCTTTTTTCTTTTTTGTC.................................................................................................................................231.000.00-1.00--------------------
..........................................................................................................TTTTTCTTTTTTGTTTTCTTTCATT.......................................................................................................................251.000.001.00---------------------
.........................................................................................................TTTTTTCTTTTTTGTTTTCTGCG..........................................................................................................................231.000.001.00---------------------
.......................................................................................................TCTTTTTTCTTTTTTGTTTTCTTTCCTG.......................................................................................................................281.000.001.00---------------------
...................................................................................................TTCTTCTTTTTTCTTTTTTGTTCTCT.............................................................................................................................261.000.001.00---------------------
......................................................................................................TTCTTTTTTCTTTTTTGTTTTTTCG...........................................................................................................................251.000.00-1.00--------------------
...................................................................................................TTCTTCTTTTTTCTTTTTTGAC.................................................................................................................................221.000.001.00---------------------
...................................................................................................TTCTTCTTTTTTCTTTTTTGTTTCCTT............................................................................................................................271.000.001.00---------------------
........................................................................................................CTTTTTTCTTTTTTGTTTTCTTTATCCCC.....................................................................................................................2911.001.00-1.00--------------------
.......................................................................................................TCTTTTTTCTTTTTTGTTTTCTTTT..........................................................................................................................251.000.001.00---------------------
..........................................................................................ACATCCTCTTTCTTCTTTTTTTTTG.......................................................................................................................................251.000.00--1.00-------------------
................................................................................................TCTTTCTTCTTTTTTCTTTTTTGTTC................................................................................................................................261.000.00-1.00--------------------
......................................................................................................TTCTTTTTTCTTTTTTGTTTCGTT............................................................................................................................241.000.00--------1.00-------------
................................................................................................TCTTTCTTCTTTTTTCTTTTTTTTAG................................................................................................................................261.000.00--------1.00-------------
....................................................................................................TCTTCTTTTTTCTTTTTTGGTG................................................................................................................................221.000.00-1.00--------------------
.......................................................................................................................TTTTCTTTATCCCCATTTTTACATTTGG.......................................................................................................281.000.00-1.00--------------------
..................................................................................................TTTCTTCTTTTTTCTTTTCG....................................................................................................................................201.000.00--1.00-------------------
..............................................................................................................TCTTTTTTGTTTTCTTTATCCCC.....................................................................................................................2311.001.001.00---------------------
..................................................................................................................................................................TTTTTCTGTCTTTGATTTCTTTCCATTCC...........................................................2911.001.00-------1.00--------------
.....................................................................................................CTTCTTTTTTCTTTTTTATTG................................................................................................................................211.000.00----1.00-----------------
...................................................................................................TTCTTCTTTTTTCTTTTAGCC..................................................................................................................................211.000.001.00---------------------
.......................................................................................................TCTTTTTTCTTTTTTGTTCCAG.............................................................................................................................221.000.00--1.00-------------------
................................................................................................TCTTTCTTCTTTTTTCTTTTTTGTTTTCC.............................................................................................................................291.000.00-1.00--------------------
..........................................................................................ACATCCTCTTTCTTCTTTTTTCTTTTG.....................................................................................................................................271.000.00----1.00-----------------
..................................................................................................TTTCTTCTTTTTTCTTTTTTCGGG................................................................................................................................241.000.001.00---------------------
........................................................................................................CTTTTTTCTTTTTTGTCG................................................................................................................................181.000.00--------1.00-------------
........................................................................................................CTTTTTTCTTTTTTGTTTATTT............................................................................................................................221.000.00-1.00--------------------
..........................................................................................ACATCCTCTTTCTTCTTTTTTCTTTTCTT...................................................................................................................................291.000.00--1.00-------------------
...............................................................................................CTCTTTCTTCTTTTTTCTTTTTTTG..................................................................................................................................251.000.00--1.00-------------------
.................................................................................................................................................................................................................TTTGTTAACTCAAACTAGGACAATTGCAA............2911.001.00-----------------1.00----
................................................................................................................................TCCCCATTTTTACATTTTATTT....................................................................................................221.000.00--1.00-------------------
..............................................................................................................TCTTTTTTGTTTTCTTTGGC........................................................................................................................201.000.00----------------1.00-----
..........................................................................................ACATCCTCTTTCTTCTTTTCTG..........................................................................................................................................221.000.00----1.00-----------------
................................................................................................................................................................................ATTTCTTTCCATTCCTCAG.......................................................191.000.00--1.00-------------------
..........................................................................................................TTTTTCTTTTTTGTTTTCTCATG.........................................................................................................................231.000.001.00---------------------
.............................................................................................TCCTCTTTCTTCTTTTTTCTTTTTCGTT.................................................................................................................................281.000.001.00---------------------
..........................................................................................ACATCCTCTTTCTTCTTTTTTCTTTTTTT...................................................................................................................................291.000.00------1.00---------------
....................................................................................................TCTTCTTTTTTCTTTTTTGTTGG...............................................................................................................................231.000.00------1.00---------------
.................................................................................................CTTTCTTCTTTTTTCTTTTTTAG..................................................................................................................................231.000.00--1.00-------------------
................................................................................................TCTTTCTTCTTTTTTCTTTTTTGTTTTCT.............................................................................................................................2911.001.00-1.00--------------------
.................................................................................................CTTTCTTCTTTTTTCTTTTTTCTTG................................................................................................................................251.000.00--1.00-------------------
.....................................................................................................................................................CATTTTTATTACCTTTTCA..................................................................................191.000.00--------------1.00-------
............................................................................................................TTTCTTTTTTGTTTTCTTTAGCTC......................................................................................................................241.000.001.00---------------------
.......................................................................................................TCTTTTTTCTTTTTTGTTTTCTTTCC.........................................................................................................................261.000.001.00---------------------
...............................................................................................CTCTTTCTTCTTTTTTCTTTTTTTC..................................................................................................................................251.000.001.00---------------------
......................................................................................................TTCTTTTTTCTTTTTTGTTTTCTTTACCCC......................................................................................................................301.000.00-1.00--------------------
.................................................................................................CTTTCTTCTTTTTTCTTTTTTG...................................................................................................................................2230.670.67-0.330.33-------------------
.................................................................................................................TTTTTGTTTTCTTTATCCC......................................................................................................................1930.330.33-0.33--------------------

Antisense strand
CAACATATGTCTTTTATCATTGCTTTCTTTGAATCTACTTATGAAAAACATAACTATTAATGCTTTATTGACATGAATATTCTTTTATTGACATCCTCTTTCTTCTTTTTTCTTTTTTGTTTTCTTTATCCCCATTTTTACATTTTGGACATTTTTATTACCTTTTTCTGTCTTTGATTTCTTTCCATTCCATTATGAAGTGACAACGATTTGTTAACTCAAACTAGGACAATTGCAATGTCATTGGTGA
...................................................................................................................................(((...........)))......................................................................................................
.....................................................................................86............................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343336SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR189785GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
...........................................................................................CATCCTCTTTCTTCTTCC............................................................................................................................................. 187.000.00---7.00------------------
...........................................................................................CATCCTCTTTCTTCTTCCC............................................................................................................................................ 195.000.00---1.00---2.00--2.00-----------
...........................................................................................CATCCTCTTTCTTCTTCCCT........................................................................................................................................... 205.000.00---3.00---1.00----1.00---------
..................................................................................................................................................................TTTTTCTGTCTTTGATCAA..................................................................... 195.000.00-----5.00----------------
..................................................................................................TTTCTTCTTTTTTCTTTTTTAAGG................................................................................................................................ 242.000.00---------2.00------------
.......................................................................................................................TTTTCTTTATCCCCATTAAAA.............................................................................................................. 211.000.00--------------------1.00-
...........................................................................................CATCCTCTTTCTTCTTCCA............................................................................................................................................ 191.000.00---1.00------------------
...........................................................................................CATCCTCTTTCTTCTTGTA............................................................................................................................................ 191.000.00---------------1.00------
................................................................................................TCTTTCTTCTTTTTTCTTTCAT.................................................................................................................................... 221.000.00-------------------1.00--
.............................................................................TATTCTTTTATTGACCTTT.......................................................................................................................................................... 191.000.00-------------1.00--------
...............................................................................................................................................................................GATTTCTTTCCATTCCATG........................................................ 191.000.00------------------1.00---