ID: uc001ivk.2_intron_3_0_chr10_30915870_r.3p
GENE: (1)
chr10:30915820-30916069-


(1)
AGO2.ip 		(1)
BRAIN 		(13)
BREAST 		(2)
CELL-LINE 		(18)
CERVIX 		(2)
OTHER 		(1)
SKIN

Sense strand
ACTGTATGGAAAAGCATTAAGGAGACAGCCTGCAGTCACATTCCTTCCCTGGACCGTAGAGTGGCCGGTTTTCCCTGATGGTGGCACTGAATGACCAAAGTGACAGGCAGCATCTAGGCAGGGCTGTGCACAGTCACCGATGCTGGATTTCGAAGTTCCTGAATCAAGATCGTCTGACCTGTTCTCCGGCTCTTTGGCAGGTTCTGTCTCCGGCAGGCTTTGAGGATGAAGGCTGCGGGCATTCTGACCC
..........................................................((.(((((((((((.(((((((.((.((((..........)))).....)).)))).))).))))))).)).)).))...................................................................................................................
.........................................................58.............................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040029(GSM532914)
G026T. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR040012(GSM532897)
G648N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		TAX577590(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040018(GSM532903)
G701N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR040019(GSM532904)
G701T. (cervix)		SRR189787SRR040016(GSM532901)
G645N. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................GGCCGGTTTTCCCTGGATT.........................................................................................................................................................................1975.000.0020.0015.0011.005.005.003.002.003.001.001.001.00-2.00--1.00---1.00---1.00--1.00-1.00-1.00------
..............................................................GGCCGGTTTTCCCTGGAAT.........................................................................................................................................................................1943.000.0014.009.005.002.004.00-1.001.001.001.00-----1.001.00----------1.00-1.00---1.00---
..............................................................GGCCGGTTTTCCCTGGGTT.........................................................................................................................................................................1915.000.005.005.002.001.00---1.00----------1.00------------------
..............................................................GGCCGGTTTTCCCTGGGAT.........................................................................................................................................................................1913.000.005.003.003.00-1.00---------------1.00----------------
..............................................................GGCCGGTTTTCCCTGGAGT.........................................................................................................................................................................1910.000.006.002.00-2.00---------------------------------
..............................................................GGCCGGTTTTCCCTGTATT.........................................................................................................................................................................1910.000.002.002.00-1.003.001.001.00------------------------------
..............................................................GGCCGGTTTTCCCTGTAAT.........................................................................................................................................................................196.000.002.001.00--1.00----1.00-----------1.00---------------
..............................................................GGCCGGTTTTCCCTGGCAT.........................................................................................................................................................................195.000.002.001.001.00-------1.00--------------------------
..............................................................GGCCGGTTTTCCCTGGAT..........................................................................................................................................................................185.000.002.001.00-----------------------------1.001.00----
..............................................................GGCCGGTTTTCCCTGGATA.........................................................................................................................................................................194.000.001.00-1.00--------2.00-------------------------
..............................................................GGCCGGTTTTCCCTGGTAT.........................................................................................................................................................................194.000.001.001.002.00----------------------------------
..............................................................GGCCGGTTTTCCCTGTGTT.........................................................................................................................................................................193.000.001.00-2.00----------------------------------
..............................................................GGCCGGTTTTCCCTGTGAT.........................................................................................................................................................................193.000.002.00---1.00--------------------------------
..............................................................GGCCGGTTTTCCCTGTAT..........................................................................................................................................................................183.000.00---3.00---------------------------------
..............................................................GGCCGGTTTTCCCTGGGTG.........................................................................................................................................................................193.000.001.00------1.00-----1.00-----------------------
..............................................................GGCCGGTTTTCCCTGGTGT.........................................................................................................................................................................193.000.001.00----1.001.00------------------------------
..............................................................GGCCGGTTTTCCCTGGGCT.........................................................................................................................................................................193.000.001.001.00---1.00-------------------------------
..............................................................GGCCGGTTTTCCCTGGATG.........................................................................................................................................................................192.000.002.00------------------------------------
..............................................................GGCCGGTTTTCCCTGGTAA.........................................................................................................................................................................192.000.00--1.00-1.00--------------------------------
..............................................................GGCCGGTTTTCCCTGGTTT.........................................................................................................................................................................192.000.00--1.00--1.00-------------------------------
..............................................................GGCCGGTTTTCCCTGTTAT.........................................................................................................................................................................192.000.001.00---------------1.00--------------------
..............................................................GGCCGGTTTTCCCTGGACT.........................................................................................................................................................................192.000.00-1.001.00----------------------------------
..............................................................GGCCGGTTTTCCCTGGCTT.........................................................................................................................................................................192.000.001.00-----1.00------------------------------
..............................................................GGCCGGTTTTCCCTGGTCT.........................................................................................................................................................................192.000.001.00----1.00-------------------------------
..............................................................GGCCGGTTTTCCCTGGGGT.........................................................................................................................................................................192.000.001.00--1.00---------------------------------
..............................................................GGCCGGTTTTCCCTGGAAG.........................................................................................................................................................................192.000.002.00------------------------------------
..............................................................GGCCGGTTTTCCCTGGCCT.........................................................................................................................................................................192.000.00---1.001.00--------------------------------
..............................................................GGCCGGTTTTCCCTGGAA..........................................................................................................................................................................182.000.00---1.00----1.00----------------------------
..............................................................GGCCGGTTTTCCCTGTCAG.........................................................................................................................................................................191.000.00---1.00---------------------------------
.............................................................TGGCCGGTTTTCCCTGGTGT.........................................................................................................................................................................201.000.00----------1.00--------------------------
............................................................................................................................................................................................................................TGAGGATGAAGGCTGCGGGATT........221.000.00-----------------1.00-------------------
..............................................................GGCCGGTTTTCCCTGGGTA.........................................................................................................................................................................191.000.00-------------1.00-----------------------
..............................................................GGCCGGTTTTCCCTGGGAG.........................................................................................................................................................................191.000.001.00------------------------------------
..............................................................GGCCGGTTTTCCCTGGAAA.........................................................................................................................................................................191.000.00-----------1.00-------------------------
..............................................................GGCCGGTTTTCCCTGTGGA.........................................................................................................................................................................191.000.001.00------------------------------------
..............................................................GGCCGGTTTTCCCTGTATG.........................................................................................................................................................................191.000.001.00------------------------------------
...................................................................................................................AGGCAGGGCTGTGCACTG.....................................................................................................................181.000.00----------------------------------1.00--
..............................................................................................................................................................................................TCTTTGGCAGGTTCTTGGG.........................................191.000.00-------------------------1.00-----------
..............................................................GGCCGGTTTTCCCTGGGA..........................................................................................................................................................................181.000.001.00------------------------------------
..............................................................GGCCGGTTTTCCCTGTAAG.........................................................................................................................................................................191.000.001.00------------------------------------
..............................................................GGCCGGTTTTCCCTGGGT..........................................................................................................................................................................181.000.001.00------------------------------------
.............................................................................................................GCATCTAGGCAGGGCTGTG..........................................................................................................................1920.500.50-----------------------------------0.50-
..............................................................................................................CATCTAGGCAGGGCTGT...........................................................................................................................1740.250.25------------------------------------0.25

Antisense strand
ACTGTATGGAAAAGCATTAAGGAGACAGCCTGCAGTCACATTCCTTCCCTGGACCGTAGAGTGGCCGGTTTTCCCTGATGGTGGCACTGAATGACCAAAGTGACAGGCAGCATCTAGGCAGGGCTGTGCACAGTCACCGATGCTGGATTTCGAAGTTCCTGAATCAAGATCGTCTGACCTGTTCTCCGGCTCTTTGGCAGGTTCTGTCTCCGGCAGGCTTTGAGGATGAAGGCTGCGGGCATTCTGACCC
..........................................................((.(((((((((((.(((((((.((.((((..........)))).....)).)))).))).))))))).)).)).))...................................................................................................................
.........................................................58.............................................................................137...............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR040029(GSM532914)
G026T. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR040012(GSM532897)
G648N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		TAX577590(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR040018(GSM532903)
G701N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR040019(GSM532904)
G701T. (cervix)		SRR189787SRR040016(GSM532901)
G645N. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR040024(GSM532909)
G613N. (cervix)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................................GCACAGTCACCGATGCTGGATAAA................................................................................................... 241.000.00----------------------1.00--------------
.................................................................................................................................ACAGTCACCGATGCTGTTTG..................................................................................................... 201.000.00--------------1.00----------------------
.....................................................................................................................GCAGGGCTGTGCACAAAAC.................................................................................................................. 191.000.00--------------1.00----------------------
.............................................................................................................................................................................CTGACCTGTTCTCCGCAG........................................................... 181.000.00------------------------1.00------------