ID: uc001int.2_intron_2_0_chr10_15091765_f.3p
GENE: OLAH(3)
chr10:15098623-15098872+


(1)
AGO1.ip
(2)
AGO2.ip
(1)
BRAIN
(1)
BREAST
(14)
CELL-LINE
(1)
CERVIX
(1)
LIVER
(1)
OTHER
(2)
SKIN

Sense strand
TTCCTTCCTTTTTCTTTCTTTTCTTTTAACAGGATCTTGCTCTGTTGCCCAGGCTGGAGTACAATAGCATGATCTTGGCTCATTGCAGCCTTAACTTTTCAGCCTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGCATACACCACTATGCTCGGCTAATTTTATTTTATTTTATTTTTTTGTAGAGACAGCATCTCACCATGTTGCCAAGGCTGGTCTCAAACTCCGGCGCTCA
........................................................................................................................................(((((((......((......))......)))))))..............................................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR343335SRR189786GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTAACG...................................................2765.000.0031.0012.0014.008.00-------------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTCTTG.....................................................2541.000.0014.0015.007.005.00-------------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTTTTG.....................................................2719.009.004.005.00---------------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTTTCAG....................................................286.000.004.002.00---------------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTTTTTTAG..................................................304.000.00-2.002.00--------------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTCTTT.....................................................253.000.001.001.001.00--------------------
.........................................CTGTTGCCCAGGCTGGAGTACTCTG........................................................................................................................................................................................252.000.00-------2.00---------------
............................................................................................................................................................................AATTTTATTTTATTTTATATTG........................................................222.000.002.00----------------------
...CTTCCTTTTTCTTTCTTTTG...................................................................................................................................................................................................................................202.000.00--1.001.00-------------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTCG.....................................................252.000.00-1.001.00--------------------
...............................................................................................................ATCCTCCCACCTCAGCCTCCTGAGTAGCCGAG...........................................................................................................322.000.00------2.00----------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTCG........................................................222.000.001.001.00---------------------
........TTTTTCTTTCTTTTCTTTAAG.............................................................................................................................................................................................................................212.000.00--1.001.00-------------------
.............................................................................................................................................GGACTACAGGCATACACCACACCT.....................................................................................242.000.00---------2.00-------------
.......CTTTTTCTTTCTTTTCAAGT...............................................................................................................................................................................................................................202.000.00--------2.00--------------
............................ACAGGATCTTGCTCTGTTGCCCAGGCTCGA................................................................................................................................................................................................302.000.00-----2.00-----------------
.......CTTTTTCTTTCTTTTCTTTAAG.............................................................................................................................................................................................................................222.000.00--2.00--------------------
...........................................................................................................................................................................TAATTTTATTTTATTTTATTTTTTTG.....................................................2681.381.380.250.750.38--------------------
.............................................................................................................TGATCCTCCCACCTCAGCCTCG.......................................................................................................................221.000.00-----------1.00-----------
.......................................................................................................................ACCTCAGCCTCCTGAGTAGCTCGGG..........................................................................................................251.000.00--------------------1.00--
........TTTTTCTTTCTTTTCTTTTAAG............................................................................................................................................................................................................................221.000.00---1.00-------------------
..........................................................................................................................................CTGGGACTACAGGCATAC..............................................................................................1801.001.00----------1.00------------
.............................................................................................................................................................................ATTTTATTTTATTTTATTTTTCGGG....................................................251.000.00------1.00----------------
.TCCTTCCTTTTTCTTTCTTTTTGG.................................................................................................................................................................................................................................241.000.00------1.00----------------
.......CTTTTTCTTTCTTTTCTTTTATTTG..........................................................................................................................................................................................................................251.000.00-1.00---------------------
.......CTTTTTCTTTCTTTTCATAG...............................................................................................................................................................................................................................201.000.00--1.00--------------------
......................................................................................................................................................................TCGGCTAATTTTATTTTATTTTATTTAT........................................................281.000.00------1.00----------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTAATG.....................................................271.000.00---1.00-------------------
....TTCCTTTTTCTTTCTTAAAG..................................................................................................................................................................................................................................201.000.00--1.00--------------------
....TTCCTTTTTCTTTCTTTTCAG.................................................................................................................................................................................................................................211.000.00---1.00-------------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTAACT...................................................271.000.00-1.00---------------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTCAT......................................................261.000.00--1.00--------------------
...........................................................................................................................................TGGGACTACAGGCATAA..............................................................................................171.000.00-----------1.00-----------
......................................................................GATCTTGGCTCATTGCAGTCGT..............................................................................................................................................................221.000.00------------1.00----------
................................................................................................................................TCCTGAGTAGCTGGGACTACAGGCATTGCC............................................................................................301.000.00-------1.00---------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTTCTG.....................................................271.000.00---1.00-------------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTCCTC.....................................................251.000.00--1.00--------------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTAATG...................................................271.000.001.00----------------------
.........TTTTCTTTCTTTTCTTTTATTTG..........................................................................................................................................................................................................................231.000.00--1.00--------------------
............................................................................................................................................................................AATTTTATTTTATTTTATTCGAG.......................................................231.000.00------1.00----------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTCTTG......................................................241.000.00--1.00--------------------
..............................AGGATCTTGCTCTGTTGC..........................................................................................................................................................................................................1801.001.00---------------1.00-------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTTTTAG..................................................281.000.00--1.00--------------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTTCAG.....................................................271.000.00--1.00--------------------
......CCTTTTTCTTTCTTTTCAAG................................................................................................................................................................................................................................201.000.00--1.00--------------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTAAC....................................................261.000.00---1.00-------------------
..........................................................................................................AAGTGATCCTCCCACCTCAGCCTCCTGG....................................................................................................................281.000.00---------------------1.00-
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTTCTTG..................................................281.000.001.00----------------------
.......CTTTTTCTTTCTTTTCTTTTATTTA..........................................................................................................................................................................................................................251.000.00--1.00--------------------
..........................................................................................................................................................................CTAATTTTATTTTATTTCTA............................................................201.000.00--------1.00--------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTTTGG...................................................271.000.00-1.00---------------------
..................................................................................................................................................................................ATTTTATTTTATTTTTTTGTACG.................................................231.000.00------1.00----------------
..........................................................GTACAATAGCATGATCTCGGA...........................................................................................................................................................................211.000.00------------------1.00----
.............................................................................................................................................................................ATTTTATTTTATTTTATTTTTCTGC....................................................251.000.00------1.00----------------
..................................................................................................................................................................................................................TCACCATGTTGCCAAGGCTGGTCTCAAGC...........291.000.00-----1.00-----------------
.......................................................................................................................................................................................................................ATGTTGCCAAGGCTGGTCCGG..............211.000.00-----1.00-----------------
..............................AGGATCTTGCTCTGTTGCCCAGGCCGA.................................................................................................................................................................................................271.000.00-----1.00-----------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTCAC.....................................................251.000.00---1.00-------------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTTTAG...................................................271.000.00---1.00-------------------
...........................................................................................................................................................CACCACTATGCTCGGCTAATTTCG.......................................................................241.000.00-----1.00-----------------
...............................................CCCAGGCTGGAGTACAATACCA.....................................................................................................................................................................................221.000.00-------1.00---------------
..........................................................................................................................................................................................................................TTGCCAAGGCTGGTCTCAAACTCCGGGCTC..301.000.00------1.00----------------
......CCTTTTTCTTTCTTTTCTTATG..............................................................................................................................................................................................................................221.000.00-------------------1.00---
..............................AGGATCTTGCTCTGTTGCCCAGGCTGGAGCGG............................................................................................................................................................................................321.000.00-----1.00-----------------
............................................................................................................................................................................AATTTTATTTTATTTTATTTTTTTGTAGAGAC..............................................3211.001.00-----1.00-----------------
...................................................................................................................................TGAGTAGCTGGGACTACAGGCATTTAC............................................................................................2701.001.00-----1.00-----------------
...................................................................................................................................TGAGTAGCTGGGACTACAGGCAT................................................................................................2301.001.00----------1.00------------
...........................................................................................................................................................................TAATTTTATTTTATTTTATTTCG........................................................231.000.00--1.00--------------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTTCCAG....................................................281.000.00--1.00--------------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTTTTTAG...................................................291.000.00---1.00-------------------
..........................................................................................................................................................................CTAATTTTATTTTATTCTAT............................................................201.000.00---1.00-------------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTTCTT......................................................261.000.00---1.00-------------------
........................................................................................................................................................................................................................TGTTGCCAAGGCTGGTCTCAAACTCCGGGGC...311.000.00------1.00----------------
..........................................................................................................................................................................CTAATTTTATTTTATTTTATTTAG........................................................241.000.001.00----------------------
........................................TCTGTTGCCCAGGCTGGAGTACTCTG........................................................................................................................................................................................261.000.00-------------1.00---------

Antisense strand
TTCCTTCCTTTTTCTTTCTTTTCTTTTAACAGGATCTTGCTCTGTTGCCCAGGCTGGAGTACAATAGCATGATCTTGGCTCATTGCAGCCTTAACTTTTCAGCCTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGCATACACCACTATGCTCGGCTAATTTTATTTTATTTTATTTTTTTGTAGAGACAGCATCTCACCATGTTGCCAAGGCTGGTCTCAAACTCCGGCGCTCA
........................................................................................................................................(((((((......((......))......)))))))..............................................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR343335SRR189786GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
.................................................CAGGCTGGAGTACAATGCC...................................................................................................................................................................................... 1920.000.00----20.00------------------
...................................................GGCTGGAGTACAATAGCAGGAC................................................................................................................................................................................. 224.000.00-----4.00-----------------
.............................................................................................................................GCCTCCTGAGTAGCTGGGACTACAGGCACGC.............................................................................................. 312.000.00------2.00----------------
.................................................CAGGCTGGAGTACAATTCC...................................................................................................................................................................................... 191.000.00----1.00------------------
..CCTTCCTTTTTCTTTCTCA..................................................................................................................................................................................................................................... 191.000.00----------------1.00------
......................................................................................................................................GTAGCTGGGACTACAGGCATACAGT........................................................................................... 251.000.00-----1.00-----------------
......................................GCTCTGTTGCCCAGGCTGGAGTACG........................................................................................................................................................................................... 251.000.00------1.00----------------
....................................................................................................AGCCTCAAGTGATCCTCCCACCTAATG........................................................................................................................... 271.000.00-----1.00-----------------
.....................................TGCTCTGTTGCCCAGGCTGGAGTACACGCA....................................................................................................................................................................................... 301.000.00-----1.00-----------------
.........................................................................................................................................GCTGGGACTACAGGCATACACCCCC........................................................................................ 251.000.00--------------1.00--------
........................................................................TCTTGGCTCATTGCAGCCTGCGC........................................................................................................................................................... 231.000.00-----1.00-----------------
.................................................CAGGCTGGAGTACAATGGC...................................................................................................................................................................................... 191.000.00----1.00------------------
................................................................................................................TCCTCCCACCTCAGCCTCCTGAGTAGCTGTGG.......................................................................................................... 321.000.00-----1.00-----------------
................................................................................................................................................................................................................................AGGCTGGTCTCAAACTCCGAAA.... 221.000.00-----------------1.00-----
..........................................................................................................................................................................................................................TTGCCAAGGCTGGTCTCAGCG........... 211.000.00------1.00----------------
.........................................................................................................................................................................................................................GTTGCCAAGGCTGGTCTGGTG............ 211.000.00------1.00----------------
.................................................CAGGCTGGAGTACAATTG....................................................................................................................................................................................... 181.000.00----1.00------------------
......................................................................................................................................GTAGCTGGGACTACAGGCATACCTG........................................................................................... 251.000.00-----1.00-----------------
.............................................................................................................TGATCCTCCCACCTCAGCCTCCTAGC................................................................................................................... 261.000.00-----1.00-----------------
...........................................................................................................................................................................................AGATGCTGTCTCTACAAAAAAATA....................................... 2470.140.14----------------------0.14