ID: uc001imx.1_intron_2_0_chr10_14572515_r.5p
GENE: FAM107B(1)
chr10:14590239-14590488-


(2)
AGO2.ip
(14)
B-CELL
(14)
BRAIN
(12)
BREAST
(42)
CELL-LINE
(4)
CERVIX
(5)
FIBROBLAST
(8)
HEART
(4)
HELA
(1)
KIDNEY
(4)
LIVER
(1)
OTHER
(36)
SKIN
(1)
TESTES
(4)
UTERUS
(1)
XRN.ip

Sense strand
TCTCGTGTGAACTGCAGAGGAGCCCTGCGCTTCCAGCTACTTGCAGCCAGGTGCTGTTACCTACGCCCCACGCACCCTCACAGACCTGTGTACAAGGGCACAAGTACCTCCCCTGGAGCTGGCAGGAGGTGCAGTCGGAAGAGCATCTGGTCCCTGAGGCCTCCCTGTGCCTCCCCCTGGACCCCCAGGGTGTCCGTGTTCCCAGTTGTTGACCCTCGGGTGCGTCTGTCGCGTCTGCTCTCTTCTCCTC
................................................................................................(((.((.((((((((((.......))..))))))))..((....)).....)))))..................................................................................................
................................................................................................97.......................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
TAX577743(Rovira)
total RNA. (breast)
TAX577740(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189785SRR038855(GSM458538)
D10. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532883(GSM532883)
G871N. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR343336SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040025(GSM532910)
G613T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
...................................................................................................................................CAGTCGGAAGAGCATCAGA....................................................................................................19170.0042.0010.00--3.00-3.00--1.00--1.00---2.003.001.001.001.00-----2.001.001.00-2.00--1.002.00-3.00-2.003.00-2.00-1.00-2.00-2.00-2.00----1.00--1.001.00-----1.00-------1.00-1.00-----2.00--1.00-------1.00---1.00-1.00-------------1.00---1.001.00----------1.00--------------------1.00-1.00---
....................................................................................................................................AGTCGGAAGAGCATCAGA....................................................................................................18159.0011.004.001.00-2.00-----1.002.00--1.002.00-1.001.001.00-----2.004.001.00---4.00-2.001.00---1.00-2.00--2.00-----1.00-1.00--1.002.001.00----1.00----------1.00-1.00-2.00-1.00--1.001.00----1.00-----------1.00---1.00----------1.00--1.00---1.001.00----------1.00-----1.00-1.00------------
....................................................................................................................................AGTCGGAAGAGCATCAGAC...................................................................................................19148.0011.00---1.00-3.00---3.004.00---1.00-1.00-3.00----1.002.00-1.001.002.001.001.00-2.001.004.00-1.00-----1.00--1.00-----1.00--1.001.00----------1.00--------------1.001.00------1.00---------1.00-1.00-------1.00-1.00-------------1.00-------------------------1.00-
...................................................................................................................................CAGTCGGAAGAGCATC.......................................................................................................16142.0042.003.00-------4.00--------5.001.00---5.00----2.00---------1.00--2.003.00-2.00---------1.00--1.001.001.001.001.002.00---2.00--------------1.00-----------------------1.00-----------------------1.00------------1.00-----------
...................................................................................................................................CAGTCGGAAGAGCATCA......................................................................................................17134.0042.003.003.003.00-2.00-4.002.00-1.001.001.002.001.00---------2.00------------1.00-------------1.00-----1.00-----1.00----1.00----------2.00---------------------1.00--------------------------------1.00-------------------
...................................................................................................................................CAGTCGGAAGAGCATGG......................................................................................................17129.002.00--3.00-5.00-1.003.001.00--2.003.001.00-1.00-------2.00------------2.00------------1.00--2.00--------------1.00----------------------------------------------------------------------------------1.00--
...................................................................................................................................CAGTCGGAAGAGCATCAG.....................................................................................................18125.0042.00---2.001.002.001.00------3.001.00-----6.00---1.00--------------1.00------1.00---------------------1.00---------------1.00-------1.00------------------------1.00-----------1.00----1.00------------------
...................................................................................................................................CAGTCGGAAGAGCATCAGAC...................................................................................................20122.0042.002.001.00-2.00-1.00-1.00-1.00---------2.00--------1.00------------1.00-1.00--------1.00--1.00----------1.00-----2.00---1.00--------------------------1.00------------------1.00----------------1.00-------------
...................................................................................................................................CAGTCGGAAGAGCATGGGA....................................................................................................19114.002.00-1.00---1.00---1.00-----------------1.00-2.00--------1.00------2.00---------------------------------------1.00--------------------1.00-1.00---1.00---------------------------------1.00------
...................................................................................................................................CAGTCGGAAGAGCATGA......................................................................................................17114.002.00--2.00-1.00-1.00-2.00--2.002.00--------1.00---------------------------1.00--------1.00------------------------------------------------------------------------------1.00---------------
...................................................................................................................................CAGTCGGAAGAGCATGGG.....................................................................................................18113.002.00--1.00-1.001.00---------1.00---1.00-2.00-1.00--1.00------1.001.00-----------------------------------------1.00------------------------------------------------------------------1.00---------
....................................................................................................................................AGTCGGAAGAGCATC.......................................................................................................15111.0011.002.00--2.00--------------1.00---1.00----------------1.00---1.001.00--------------1.00--1.00------------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCAG.....................................................................................................17110.0011.00------1.00--1.00-2.001.00-------------------------------------1.00-----------------1.002.00---------------------------------------------------------------------------1.00-------
...................................................................................................................................CAGTCGGAAGAGCATG.......................................................................................................1618.002.00-------------------1.00-----------------------------1.00--------------1.00----------------------1.00---------1.00---------1.00----------------1.00------1.00---------------------
...................................................................................................................................CAGTCGGAAGAGCATAA......................................................................................................1715.002.00-2.00--1.00--1.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATGAGA....................................................................................................1915.002.00-2.00-------------1.00-----1.00-------------------------1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCAGAA...................................................................................................1915.0011.00-------------1.00-------------------------------------1.00----------------------1.00------------------------------1.00------------------------------------1.00----------
...................................................................................................................................CAGTCGGAAGAGCATGAG.....................................................................................................1815.002.00--------1.00----------2.00------2.00------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCAAAC...................................................................................................1913.0011.00----------------------------1.00------1.00----------------------------------1.00----------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATGGGG....................................................................................................1913.002.00-1.00--1.00-----------------------------------------------------------------1.00----------------------------------------------------------------------------------
..TCGTGTGAACTGCAGGAC......................................................................................................................................................................................................................................183.000.00-------------------------------3.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCAAA....................................................................................................1913.0042.00-1.00-----1.00------------------------------------------------------------------1.00------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCC......................................................................................................1712.0042.00--1.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................GTCCGTGTTCCCAGTTGTTGA......................................2112.002.00---------------2.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCCGAC...................................................................................................2012.0042.00--------------1.00-------------1.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATTAGA....................................................................................................1912.002.00------1.001.00-------------------------------------------------------------------------------------------------------------------------------------------------
..TCGTGTGAACTGCAGGACA.....................................................................................................................................................................................................................................192.000.00-------------------------------2.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCAGAA...................................................................................................2012.0042.00-1.00--------------------------------------------------------------------------------------1.00----------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCAT........................................................................................................1512.002.001.00-------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................GTCGGAAGAGCATCTGGT...................................................................................................1812.002.00-----------------------------------------------2.00---------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATAAGA....................................................................................................1912.002.00--------------1.00-1.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATGC......................................................................................................1712.002.00------1.001.00-------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................AGTACCTCCCCTGGAGCTGGCAGGAGGTGC......................................................................................................................3011.001.00-----------------------------------------------------------------------------------------------------------------------1.00---------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCAGC....................................................................................................1911.0042.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATAAG.....................................................................................................1811.002.00----------------1.00----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCGGAC...................................................................................................1911.0011.00---------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATGAGT....................................................................................................1911.002.00-----------1.00---------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCA......................................................................................................1611.0011.00----------------------------------------------------------------1.00----------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCAA.....................................................................................................1811.0042.00---------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCTGAC...................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
....................................................................................................................................AGTCGGAAGAGCATCAAC....................................................................................................1811.0011.00-----------------------------------------------------------------------------1.00---------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCTGGT...................................................................................................2011.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCACAC...................................................................................................1911.0011.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................AAGTACCTCCCCTGGAGCTCAG...............................................................................................................................221.000.00---------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
...................................................................................................................................CAGTCGGAAGAGCATCAGT....................................................................................................1911.0042.00---------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCATAC...................................................................................................2011.0042.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CCAGGGTGTCCGTGTTCCCAGTTGTTGA......................................2811.001.00----------------------------------------------------------------------------------------------------------------------------------1.00----------------------
....................................................................................................................................AGTCGGAAGAGCATCAGTC...................................................................................................1911.0011.00-----------------------------------------------------------------------------------1.00---------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATGAAA....................................................................................................1911.002.00---------------------------------------------------------------------------------------------------------------------------------------1.00-----------------
....................................................................................................................................AGTCGGAAGAGCATCACA....................................................................................................1811.0011.00----------------------------------------------------------------------------------------------------------------------1.00----------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCCGG....................................................................................................1911.0042.00-----------------------------------1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCGG.....................................................................................................1711.0011.00----------1.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATGGTA....................................................................................................1911.002.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCCAA....................................................................................................1811.0011.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................AGGAGGTGCAGTCGGAGCT............................................................................................................191.000.00----------------------------------------------------------------------------------------------------------------------------------------------------1.00----
....................................................................................................................................AGTCGGAAGAGCATCAATC...................................................................................................1911.0011.00------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCATCG...................................................................................................2011.0042.00---------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATGGGC....................................................................................................1911.002.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCTGTT...................................................................................................201.000.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCAC.....................................................................................................1811.0042.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGTCGGAAGAGCATCGGCC...................................................................................................1911.0011.00------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCG......................................................................................................1711.0042.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CAGTCGGAAGAGCATCATA....................................................................................................1911.0042.00-------------------------------------------------------------------------------------------1.00-------------------------------------------------------------
....................................................................................................................................................................................................TGTTCCCAGTTGTTGA......................................1640.250.25-------------------------------------------------------------------------------------0.25-------------------------------------------------------------------

Antisense strand
TCTCGTGTGAACTGCAGAGGAGCCCTGCGCTTCCAGCTACTTGCAGCCAGGTGCTGTTACCTACGCCCCACGCACCCTCACAGACCTGTGTACAAGGGCACAAGTACCTCCCCTGGAGCTGGCAGGAGGTGCAGTCGGAAGAGCATCTGGTCCCTGAGGCCTCCCTGTGCCTCCCCCTGGACCCCCAGGGTGTCCGTGTTCCCAGTTGTTGACCCTCGGGTGCGTCTGTCGCGTCTGCTCTCTTCTCCTC
................................................................................................(((.((.((((((((((.......))..))))))))..((....)).....)))))..................................................................................................
................................................................................................97.......................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
TAX577743(Rovira)
total RNA. (breast)
TAX577740(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189785SRR038855(GSM458538)
D10. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038856(GSM458539)
D11. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532883(GSM532883)
G871N. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR343336SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040025(GSM532910)
G613T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR029127(GSM416756)
A549. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029132(GSM416761)
MB-MDA231. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
.............................................................................TCACAGACCTGTGTATGC........................................................................................................................................................... 181.000.00-----------------------------------------------------------------------------------------------1.00---------------------------------------------------------
.......................CCTGCGCTTCCAGCTACTTGCGG............................................................................................................................................................................................................ 231.000.00----------------------------------------------------------------------------------------------------------------------------------------1.00----------------
............................................................................................................................................................................................CCGAGGGTCAACAACTGGGAACACGGACACC............................... 3111.001.00----------1.00----------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CTGGACCCCCAGGGTCGGC....................................................... 191.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGCATCTGGTCCCTGGCCG.......................................................................................... 191.000.00------------------------------------------------------------------------------------------------------------------------------------------------1.00--------
..........................................................................CCCTCACAGACCTGTGCA.............................................................................................................................................................. 180.250.00-----------------------------------------------------------------------------------0.25---------------------------------------------------------------------
..........................................................................CCCTCACAGACCTGTGC............................................................................................................................................................... 170.250.00--------------------------------------------------------------------------------------------------------------------------------------------------------0.25
..........................................................................ACAGGTCTGTGAGGG................................................................................................................................................................. 1540.250.25------------------------------------------------------------------------------------0.25--------------------------------------------------------------------