ID: uc001ima.2_intron_0_0_chr10_13203607_f.3p
GENE: (1)
chr10:13205928-13206177+


(2)
B-CELL
(1)
BREAST
(13)
CELL-LINE
(3)
CERVIX
(2)
HEART
(1)
HELA
(1)
LIVER
(2)
OTHER
(53)
SKIN

Sense strand
CACAAGTAAAAGTGAGCTGCTACATCCAAGGAAGGAGATGGCATTGGCGGTGTGGAGAGAGGAGGTGAGAAATGGTCAGATTCTGGATGAATTCTGAGGTTAGAGCCCATAGGAGTGGTAGGATTCTGGGTTTGTTGGATGTGTGTTGTGAGAGAAAGAGAAGAATTGAAAGTGACATTTCTAATATTGCTTTCACACAGCCAAGATTCTACATTGCTCATCTGGGCATCTGAGCCTCCTTCGAAGTTTC
...........................................................((((..(((.......)))..))))....((((((((..........((((....))))))))))))............................................................................................................................
..................................................51.........................................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189785SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR038860(GSM458543)
MM426. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532885(GSM532885)
G850N. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
...................CTACATCCAAGGAAGG.......................................................................................................................................................................................................................16137.0037.00--4.004.001.004.002.00---3.001.003.00-1.001.00----2.001.001.00--1.001.00-1.00-1.001.00-1.00-----1.00----------------1.00-1.00-----------------------
...........................................................AGGAGGTGAGAAATGGCAGA...........................................................................................................................................................................2021.000.0016.003.00------2.00-------------------------------------------------------------------------
...........................................................AGGAGGTGAGAAATGGCA.............................................................................................................................................................................1818.000.0010.005.00-----3.00--------------------------------------------------------------------------
...................CTACATCCAAGGAAGGCAGC...................................................................................................................................................................................................................20112.0037.00------2.00--1.00---3.00---1.00------1.00-------------------1.00--1.00--1.00----------1.00--------------------
...................CTACATCCAAGGAAGGCAG....................................................................................................................................................................................................................19110.0037.00---------1.00----1.00---1.00---1.00------2.00--1.00----1.00-----1.00----------1.00---------------------------
...................CTACATCCAAGGAAGGC......................................................................................................................................................................................................................17110.0037.00----1.00----2.00------1.00-----------1.00-------------1.00--1.001.00-1.00---1.00-----------------------------
....................TACATCCAAGGAAGG.......................................................................................................................................................................................................................1588.008.00--0.880.751.380.620.50---0.25-----0.12-------------0.880.380.120.25------------------------------0.120.50---0.380.25-0.120.12---0.120.120.12--
...................CTACATCCAAGGAAGGCA.....................................................................................................................................................................................................................1814.0037.00----1.00-----------1.00----1.00----------------1.00-------------------------------------------
..................GCTACATCCAAGGAAGGCA.....................................................................................................................................................................................................................1913.001.00-----------------1.00------1.00-----------1.00---------------------------------------------
...............................................................................................................................GGGTTTGTTGGATGTGTGTTGTGAGAGAAAGAGAAGAATTGAAAGTGACATTTCTAATATTGCTTTCACACAG..................................................7312.002.00---------------------------2.00------------------------------------------------------
............................................................GGAGGTGAGAAATGGCAGA...........................................................................................................................................................................192.000.00-1.00------1.00-------------------------------------------------------------------------
.................................................................................................................AGTGGTAGGATTCTGTCT.......................................................................................................................181.000.00----------------------------------------1.00-----------------------------------------
..........................................................................................................................................................................................................AAGATTCTACATTGCTCATCTGGG........................2411.001.00--------------------------1.00-------------------------------------------------------
..................GCTACATCCAAGGAAGG.......................................................................................................................................................................................................................1711.001.00-------------------------------------------------------1.00--------------------------
..............................................................................................................AGGAGTGGTAGGATTCTG..........................................................................................................................1821.001.00----------------------------------------------------------------0.50-0.50---------------
..................................................................................................................GTGGTAGGATTCTGGCC.......................................................................................................................171.000.00---------------------------------------------------------1.00------------------------
.................................................................................................................AGTGGTAGGATTCTGCG........................................................................................................................171.000.00-----------------------------------1.00----------------------------------------------
.....................ACATCCAAGGAAGGAGCAG..................................................................................................................................................................................................................191.000.00-----------------------------------------------------------1.00----------------------
.................................................................................................................AGTGGTAGGATTCTGGTT.......................................................................................................................181.000.00-----------------------------------------1.00----------------------------------------
...........................................................AGGAGGTGAGAAATGGCAGT...........................................................................................................................................................................201.000.00--------1.00-------------------------------------------------------------------------
......................CATCCAAGGAAGGAGGCAG.................................................................................................................................................................................................................191.000.00------------------1.00---------------------------------------------------------------
...................CTACATCCAAGGAAGGAA.....................................................................................................................................................................................................................181.000.00---------------------------------------------------------------1.00------------------
............................AGGAAGGAGATGGCATTGGCGGTG......................................................................................................................................................................................................2411.001.00-------------------------------------------------1.00--------------------------------
...........................................................AGGAGGTGAGAAATGGCAG............................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------
..................GCTACATCCAAGGAAGGCAG....................................................................................................................................................................................................................2011.001.00---------------1.00------------------------------------------------------------------
..................GCTACATCCAAGGAAGGC......................................................................................................................................................................................................................1811.001.00----------------------------------1.00-----------------------------------------------
..................................................................................................................GTGGTAGGATTCTGGCCT......................................................................................................................181.000.00------------------------------------------------------------1.00---------------------
...........................................................AGGAGGTGAGAAATGGCAGC...........................................................................................................................................................................201.000.001.00---------------------------------------------------------------------------------
...........................................................................TCAGATTCTGGATGAAGGCA...........................................................................................................................................................201.000.00--------------------------------------------------------------1.00-------------------
.....................ACATCCAAGGAAGGAGCAGG.................................................................................................................................................................................................................201.000.00-------------------------1.00--------------------------------------------------------
........................................................................................................................................................AGAAAGAGAAGAATTT..................................................................................161.000.00-------1.00--------------------------------------------------------------------------
....................TACATCCAAGGAAGGCAGC...................................................................................................................................................................................................................1980.758.00----0.12-----------------------------0.25-0.120.12---------------------------0.12----------------
....................TACATCCAAGGAAGGCAG....................................................................................................................................................................................................................1880.758.00--------------0.25--0.12--------------------------------------------------------0.12-0.12----0.12
....................TACATCCAAGGAAGGC......................................................................................................................................................................................................................1680.628.00--0.12------------0.25----------------0.12-----------------------------------------------0.12-
.................................................................................................................AGTGGTAGGATTCTGGGT.......................................................................................................................1820.500.50--------------------------------------------------------------------0.50-------------
........................................................GAGAGGAGGTGAGAAATG................................................................................................................................................................................1820.500.50-------------------------------------------------------------------0.50--------------
....................TACATCCAAGGAAGGCA.....................................................................................................................................................................................................................1780.258.00-----------------------------------0.12---------------------------------------0.12------
....................................................................................................................GGTAGGATTCTGGGT.......................................................................................................................1580.250.25-----------------------------------------------------------------------0.25----------
...................CTACATCCAAGGAAG........................................................................................................................................................................................................................1580.120.12--------------------------------------0.12-------------------------------------------
....................TACATCCAAGGAAGGCGGT...................................................................................................................................................................................................................1980.128.00----0.12-----------------------------------------------------------------------------

Antisense strand
CACAAGTAAAAGTGAGCTGCTACATCCAAGGAAGGAGATGGCATTGGCGGTGTGGAGAGAGGAGGTGAGAAATGGTCAGATTCTGGATGAATTCTGAGGTTAGAGCCCATAGGAGTGGTAGGATTCTGGGTTTGTTGGATGTGTGTTGTGAGAGAAAGAGAAGAATTGAAAGTGACATTTCTAATATTGCTTTCACACAGCCAAGATTCTACATTGCTCATCTGGGCATCTGAGCCTCCTTCGAAGTTTC
...........................................................((((..(((.......)))..))))....((((((((..........((((....))))))))))))............................................................................................................................
..................................................51.........................................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189785SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR038860(GSM458543)
MM426. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532885(GSM532885)
G850N. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
.............................................................................................................TAGGAGTGGTAGGATCCA........................................................................................................................... 182.000.00-----------------------2.00----------------------------------------------------------
.....................ACATCCAAGGAAGGACTGA.................................................................................................................................................................................................................. 192.000.00-------------------1.00-------------------------------1.00------------------------------
................................................GGTGTGGAGAGAGGAATG........................................................................................................................................................................................ 181.000.00-----------------------------------------------------1.00----------------------------
...................CTACATCCAAGGAAGGAA..................................................................................................................................................................................................................... 181.000.00-------------------1.00--------------------------------------------------------------
...........................................................................................................................................................................................................AGATTCTACATTGCTCCT............................. 181.000.00-----------1.00----------------------------------------------------------------------
...........................................................................................................................................................................................................AGATTCTACATTGCTCC.............................. 171.000.00-----------1.00----------------------------------------------------------------------
...................CTTCCTTGGATGTAG........................................................................................................................................................................................................................ 1580.120.12--------------------------------0.12-------------------------------------------------