ID: uc001ihh.1_intron_2_0_chr10_4875659_f.3p
GENE: AKR1E2(3)
chr10:4877667-4877916+


(1)
BREAST 		(7)
CELL-LINE 		(5)
CERVIX 		(1)
FIBROBLAST 		(2)
LIVER 		(1)
OTHER 		(1)
SKIN

Sense strand
GGCTGGCAGAGGCTTTGCCAGCCATCCAGTCCACCAGCCATTCATCTTTTCTTAGAAAGGTGAAGACTGGGCCTGGTCACATGGCCAGGCTGGGGTTGCTTAGTGACAGGGCTGTGGCTTGGATGCAGGTCTCCTGACACATGGTTTTTTTTGTTTTGTTTTGTTTTGTTTTCACACATCTCAACTCTCCTTCTTCGCAGCCTCCTCATCCAGAATGGATCATGAGCTGCAGTGAACTTTCCTTCTGCCT
......................................................................((((((((....)))))))).((((..(((..(((.(((((....((((((....))))))))))).)))..)))..))))...................................................................................................
......................................................................71....................................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTGCTG.................................................................................2524.000.007.0016.001.00-----------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGCTG.................................................................................2621.000.0015.005.001.00-----------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTTTTCGAG..........................................................................3117.000.009.006.002.00-----------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTGTCG.................................................................................2510.000.006.004.00------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGTCG.................................................................................2610.000.007.003.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCTTG............................................................................309.000.006.002.00------------1.00-----
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGCTG.................................................................................248.000.003.005.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTGTC..................................................................................246.000.004.002.00------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCAAGG.........................................................................315.000.002.003.00------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGCT..................................................................................255.000.003.002.00------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCTCCC.........................................................................315.000.00-5.00------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCACC..........................................................................305.000.003.002.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCTTC............................................................................305.000.003.002.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTCTCG...............................................................................275.000.001.003.001.00-----------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGTCG.................................................................................245.000.003.002.00------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTCTG..................................................................................275.000.001.004.00------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTTGTTTTGTTTCCC............................................................................324.000.004.00-------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGTC..................................................................................254.000.003.001.00------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTTGTTGCTG.................................................................................274.000.003.001.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTTCG............................................................................304.000.002.001.001.00-----------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCTCC............................................................................304.000.004.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCGC.............................................................................293.000.003.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCAATG.........................................................................313.000.001.00-2.00-----------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGGTC....................................................................................253.000.002.001.00------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTTGTTTCAC.................................................................................273.000.003.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTCGT..................................................................................273.000.00-3.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTCTGG...........................................................................313.000.002.001.00------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTTCTTC................................................................................272.000.002.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCCCC............................................................................302.000.002.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTCTTC.................................................................................242.000.00-2.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCTCT.................................................................................252.000.00-1.001.00-----------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTTTTCGAGA.........................................................................322.000.002.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGGGC...............................................................................262.000.001.001.00------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCGTC..........................................................................302.000.002.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTCCGT...............................................................................272.000.002.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTCTGC.............................................................................292.000.002.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTCTGC...............................................................................272.000.002.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTCTC............................................................................302.000.002.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCGTG............................................................................302.000.002.00-------------------
...........................................................................GTCACATGGCCAGGCTTTTC...........................................................................................................................................................202.000.00--------1.00----1.00------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTTCTGC................................................................................272.000.002.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTTGC..................................................................................272.000.002.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCGAGG.........................................................................312.000.001.001.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCCG.............................................................................292.000.001.00-1.00-----------------
.......................................................................................................................................................TGTTTTGTTTTGTTTTGTTTTCGGTC.........................................................................262.000.001.001.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCCAG............................................................................302.000.002.00-------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGC...................................................................................242.000.002.00-------------------
.......................................................................................................................................................TGTTTTGTTTTGTTTTGTTTTCGGCC.........................................................................262.000.002.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTTGCC.................................................................................282.000.001.001.00------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTCGAG.............................................................................282.000.001.001.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTCGG............................................................................302.000.001.001.00------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCTGC..........................................................................302.000.00-2.00------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTTGCG.................................................................................282.000.00-2.00------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTTTGTTGC..............................................................................291.000.001.00-------------------
...............................CACCAGCCATTCATCTTTTAAAA....................................................................................................................................................................................................231.000.00-----------1.00--------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTCGT..............................................................................261.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCTC.............................................................................291.000.00-1.00------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTTTCG.................................................................................281.000.001.00-------------------
...................................................................................................................................................TTTTTGTTTTGTTTTGTTTTGTTTTCAGGAG........................................................................311.000.001.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTGCTG.................................................................................231.000.00-1.00------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGGTG.................................................................................241.000.001.00-------------------
.....................................................................................................................................................TTTGTTTTGTTTTGTTTTGTTTTCGGCC.........................................................................281.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCTTC.................................................................................251.000.001.00-------------------
.......................................ATTCATCTTTTCTTAATTG................................................................................................................................................................................................191.000.00------------------1.00-
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTCGC..............................................................................261.000.001.00-------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTTCGC.................................................................................261.000.001.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTCTCC.............................................................................281.000.001.00-------------------
...................................................................................................................................................TTTTTGTTTTGTTTTGTTTTGTTTTCTAGC.........................................................................301.000.00-1.00------------------
...........................................................................GTCACATGGCCAGGCATT.............................................................................................................................................................181.000.00------1.00-------------
...........................................................................................................................................................................................................................TCATGAGCTGCAGTGAACTTTCC........2311.001.00----------1.00---------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTATGG...............................................................................271.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTCTC.......................................................................................221.000.001.00-------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTTTCCGG...............................................................................281.000.001.00-------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTTGTTCCT..................................................................................261.000.00-1.00------------------
............................................................................................................................................ATGGTTTTTTTTGTTTTGTTTCT.......................................................................................231.000.00-1.00------------------
............................................................................................................................................ATGGTTTTTTTTGTTTTGTTTTGTTTCGT.................................................................................291.000.001.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCTATC.........................................................................311.000.001.00-------------------
...................................................................................................................................................TTTTTGTTTTGTTTTGTTTTGTTTTCGTCG.........................................................................301.000.00--1.00-----------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCG..............................................................................281.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCCTG............................................................................301.000.00--1.00-----------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTGTTG.................................................................................281.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTTCAAG..........................................................................321.000.00--1.00-----------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTCTG..................................................................................251.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTGTT..................................................................................271.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCGCC.................................................................................251.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCG...................................................................................231.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTATTC.............................................................................291.000.001.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTTTATG............................................................................291.000.00--1.00-----------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTTTTCGTT..........................................................................311.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGCGTG..............................................................................281.000.00-1.00------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTTTTCGAGG.........................................................................321.000.001.00-------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTTTGTTGTC.............................................................................301.000.001.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTCGGG.................................................................................241.000.001.00-------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTCG...................................................................................241.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTCTTG...........................................................................311.000.001.00-------------------
...........................................................................GTCACATGGCCAGGCTGTTAC..........................................................................................................................................................211.000.00----1.00---------------
.........................................................................................................................................................TTTTGTTTTGTTTTGTTTTCGGTC.........................................................................241.000.00-1.00------------------
..........................................................................................................................................................TTTGTTTTGTTTTGTTTTCGGTC.........................................................................231.000.001.00-------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTCTG........................................................................................201.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTCGT...................................................................................261.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCTTT............................................................................301.000.00--1.00-----------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTTCAC...........................................................................3111.001.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTTCGG...........................................................................311.000.00-1.00------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTACG.................................................................................241.000.00--1.00-----------------
............................................................................................................................................ATGGTTTTTTTTGTTTCTGC..........................................................................................201.000.001.00-------------------
...................................................................................................................................................TTTTTGTTTTGTTTTGTTTTGTTTTCGGAG.........................................................................301.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTCCT..............................................................................281.000.001.00-------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTCGT........................................................................................191.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTGTC..................................................................................271.000.00-1.00------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTCGG......................................................................................211.000.00-1.00------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGTC..................................................................................231.000.00-1.00------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTTTCGAG...............................................................................301.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCGT.............................................................................291.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTCGC...........................................................................................181.000.001.00-------------------
.....................................................................................................................................................TTTGTTTTGTTTTGTTTTGTTTTCGTCC.........................................................................281.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTTGCGT................................................................................291.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCGG.............................................................................291.000.001.00-------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTCGCC.................................................................................261.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTCTAC.....................................................................................241.000.00-1.00------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTCGG......................................................................................221.000.001.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCTGGC.........................................................................311.000.001.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTGGC.............................................................................271.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCGTT.................................................................................251.000.00-1.00------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTTGTTTCT..................................................................................261.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTCTTG..................................................................................271.000.00-1.00------------------
....................................................................................................................................................TTTTGTTTTGTTTTGTTTTGTTTTCGGTC.........................................................................291.000.001.00-------------------
............................................................................................................................................ATGGTTTTTTTTGTTTTGTTGCTT......................................................................................241.000.00-1.00------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTGTGG.................................................................................281.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTCCG..............................................................................281.000.001.00-------------------
..........................................................................................................................................................TTTGTTTTGTTTTGTTTTCACCGG........................................................................241.000.001.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTTGC..............................................................................271.000.001.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGGGTC..............................................................................271.000.00-1.00------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCTAAG.........................................................................311.000.00--1.00-----------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTCTCG.............................................................................271.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTGTCG.................................................................................281.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTCGAG....................................................................................251.000.001.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTTTTCAAGC.........................................................................321.000.001.00-------------------
............................................................................TCACATGGCCAGGCTGGGCTCC........................................................................................................................................................221.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTAACT................................................................................261.000.001.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCTGGG.........................................................................311.000.00-1.00------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTTTTCAATG.........................................................................321.000.00--1.00-----------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTTCGAG..........................................................................321.000.00--1.00-----------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTTTGGCT...............................................................................281.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCTGG.................................................................................251.000.00-1.00------------------
...............................CACCAGCCATTCATCTCTTG.......................................................................................................................................................................................................201.000.00----1.00---------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTGATG.................................................................................281.000.00-1.00------------------
...........................................................................................................................................................TTGTTTTGTTTTGTTTTCGTCC.........................................................................221.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTATC................................................................................261.000.001.00-------------------
............CTTTGCCAGCCATCCATG............................................................................................................................................................................................................................181.000.00--1.00-----------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTCCTG.............................................................................281.000.001.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCACT..........................................................................301.000.00-1.00------------------
...................................................................................................................................................TTTTTGTTTTGTTTTGTTTTGTTTTCAAATC........................................................................311.000.00-1.00------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCTTC..........................................................................301.000.001.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTCGAG.................................................................................241.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTCTGG............................................................................301.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCTCA.................................................................................251.000.00-1.00------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGTA..................................................................................251.000.00-1.00------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTCCTG....................................................................................251.000.00-1.00------------------
.......................................................................................GGCTGGGGTTGCTTATAAG................................................................................................................................................191.000.00-----1.00--------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGCCG.................................................................................261.000.001.00-------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTTGTTTTGTTCTT.............................................................................311.000.001.00-------------------
....................................................................................................................................................TTTTGTTTTGTTTTGTTTTGTTTTCGCC..........................................................................281.000.001.00-------------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTGC...................................................................................261.000.001.00-------------------
...........................................................................GTCACATGGCCAGGCATTT............................................................................................................................................................191.000.00---1.00----------------
............................................................................................................................................ATGGTTTTTTTTGTTTTATTC.........................................................................................211.000.00-1.00------------------
..................................................................................................................................................................................................................CAGAATGGATCATGAGCTGCAGTGAACTTT..........3011.001.00-----------------1.00--
...................................................................................................................................................TTTTTGTTTTGTTTTGTTTTGTTTTCTGCC.........................................................................301.000.00-1.00------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTCC...............................................................................251.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTTCCAG..........................................................................321.000.001.00-------------------
...........................................................................GTCACATGGCCAGGCATTA............................................................................................................................................................191.000.00---1.00----------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTCC...............................................................................261.000.001.00-------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTCGTT.....................................................................................231.000.001.00-------------------
.........................................................................................................................................................TTTTGTTTTGTTTTGTTTTCGGGC.........................................................................241.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTTTCTCA...........................................................................311.000.00--1.00-----------------
.............................................................................................................................................TGGTTTTTTTTGTTTTGTTTTGTTTCTT.................................................................................281.000.00-1.00------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTTTATC................................................................................271.000.001.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTTTTCACG..........................................................................301.000.00--1.00-----------------
...................................................................................................................................................TTTTTGTTTTGTTTTGTTTTGTTTTCTTGC.........................................................................301.000.001.00-------------------
...................................................................................................................................................TTTTTGTTTTGTTTTGTTTTGTTTTCGCC..........................................................................291.000.00-1.00------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTTTGTCGG..............................................................................281.000.00-1.00------------------
...............................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTTGTTC................................................................................271.000.001.00-------------------
.................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTGTACTG.............................................................................281.000.00--1.00-----------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTTGTTGC...................................................................................251.000.001.00-------------------
................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCCGG.................................................................................251.000.001.00-------------------
............................................................................................................................................ATGGTTTTTTTTGTTTTGTTTTGTTTCGAG................................................................................301.000.001.00-------------------
..............................................................................................................................................GGTTTTTTTTGTTTTGTTTCG.......................................................................................211.000.001.00-------------------
..................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTGTCCTG.............................................................................271.000.00-1.00------------------
..................................................................................................................................................................................TCTCAACTCTCCTTCTGTG.....................................................191.000.00---------------1.00----
.....................................................AGAAAGGTGAAGACTGGGCCT................................................................................................................................................................................2111.001.00----------------1.00---
..........................................................................................................................................ACATGGTTTTTTTTGTTTTGTTTT........................................................................................2430.330.330.33-------------------
......................CATCCAGTCCACCAGC....................................................................................................................................................................................................................1650.200.20-------------------0.20

Antisense strand
GGCTGGCAGAGGCTTTGCCAGCCATCCAGTCCACCAGCCATTCATCTTTTCTTAGAAAGGTGAAGACTGGGCCTGGTCACATGGCCAGGCTGGGGTTGCTTAGTGACAGGGCTGTGGCTTGGATGCAGGTCTCCTGACACATGGTTTTTTTTGTTTTGTTTTGTTTTGTTTTCACACATCTCAACTCTCCTTCTTCGCAGCCTCCTCATCCAGAATGGATCATGAGCTGCAGTGAACTTTCCTTCTGCCT
......................................................................((((((((....)))))))).((((..(((..(((.(((((....((((((....))))))))))).)))..)))..))))...................................................................................................
......................................................................71....................................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................................................................................................................TTTTCACACATCTCAAAGG............................................................... 191.000.00---------1.00----------
.............................................................................................................................................................................ACACATCTCAACTCTCCTT.......................................................... 191.000.00-------1.00------------
..............................CCACCAGCCATTCATTGTT......................................................................................................................................................................................................... 191.000.00------------1.00-------