ID: uc001ifa.1_intron_4_0_chr1_249150146_r
GENE: (3)
chr1:249150096-249150621-


(4)
B-CELL
(2)
BRAIN
(4)
BREAST
(19)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(4)
HELA
(3)
OTHER
(28)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GAGGGTGGGACCCCCACCAGAGACCTTCCCACCTCCAGGAGAGGAAGAGGGTGAGGAAGAAGAGGACAATGATGAGGATGAAGAGGAGATGCTCAGTGATGCCAGCTTATGGACCTACAGCTCCTCCCCAGATGAGCAAGTTGGGGTTGAGGGAGAATGAGCAGAGCAAGAGAGGGAGGCAGCTGGCCTGGCAGTTCATGGCTTTGCAGACTAGAGGGAAGGGCTTGTTAGTGTGGAGGGAAGGGTGGGTTTTGGGGAAGGCAAAAAGAACTAGAGGCTTTGAACTGAGGGGGTGAAAAGGGGTGAAGTCAGGTGCAGGGAGATTGAGGGCTGAAAGCAGATATGAATGGGGAGCCTAGGGTGGGGGTAGGGTTGTTTCAAGTTTGAGATCTTTTCAGTTTAGGGGCTAGGGTCGGGCAGGGGATGGCTGACTGCCCAGAAAGTTAATGCCATCTTCCTCTTTGTTCTCCTTTCAGTAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCCCTGTCACCTGCACAC
.........................................................................................................................................................................................................................................................................................................................(((...........(((((((((((((((.((((....((.((((.........)))).))..)))).))))).....))))))))))...(((....)))..)))...........................................................................................................
................................................................................................................................................................................................................................................................................................................305..................................................................................................................422......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040008(GSM532893)
G727N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM359175(GSM359175)
hela_5_pct. (hela)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
.....................................................................................................................................................................................................................................................................................................................CAGGTGCAGGGAGATTGAGGGC...................................................................................................................................................................................................2217.007.00-2.00---1.00----1.001.00-------------------------1.001.00-----------------------------------
.......................................................................................................................................................................................................................................................................................................................GGTGCAGGGAGATTGAGGGC...................................................................................................................................................................................................2015.005.00-4.00---1.00--------------------------------------------------------------------
..........................................................................................................TTATGGACCTACAGCTCCTCCCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................2615.005.00-------------------1.00------1.00------------1.00------1.00---1.00-----------------------
............................................................................................................................................................................................................................................................................................CTGAGGGGGTGAAAAAAA................................................................................................................................................................................................................................185.000.00---------------------1.00--------------------------1.001.00-----1.00----1.00-------------
.......................................................................................................AGCTTATGGACCTACAGCTCCTCCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................2814.004.00------3.001.00------------------------------------------------------------------
........................................................................................................................................................................................................................................................................AAAGAACTAGAGGCTTTGAACTGAGG............................................................................................................................................................................................................................................2613.003.00--3.00-----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................AGGTGCAGGGAGATTGAGGGC...................................................................................................................................................................................................2113.003.00--------------------1.00-----------1.00------------------1.00----------------------
.........................................................................................................CTTATGGACCTACAGCTCCTCCCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................2713.003.00---------------2.00---------------------------1.00------------------------------
..................................CCAGGAGAGGAAGAGGGTGAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00------------2.00-------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................CAGTTTAGGGGCTAGGGTCGGGC............................................................................................................2312.002.00----------------2.00---------------------------------------------------------
........................................................AAGAAGAGGACAATGATGAGGATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002.00---2.00----------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................CTGAGGGGGTGAAAAAAAA...............................................................................................................................................................................................................................192.000.00---1.00----------------------------------------------------------1.00-----------
........................................................................................................GCTTATGGACCTACAG......................................................................................................................................................................................................................................................................................................................................................................................................................1612.002.00----2.00---------------------------------------------------------------------
....................................................GAGGAAGAAGAGGACAATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.000.50----------------------------------------------------1.00---------------------
..........................................................GAAGAGGACAATGATGAGGATGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00-------------1.00------------------------------------------------------------
...........................................................AAGAGGACAATGATGAGGATGAAGAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-------1.00------------------------------------------------------------------
........................................................................................................GCTTATGGACCTACAGCTCCTCCCC.............................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-----------------------1.00--------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................GGTGGGGGTAGGGTTGTTTCAAGTTTGAGA.........................................................................................................................................3011.001.00---------------------------------1.00----------------------------------------
...........................................................................................................................................GTTGGGGTTGAGGGAGAATGAGCAGAGCAAGA...................................................................................................................................................................................................................................................................................................................................................................3211.001.00----------1.00---------------------------------------------------------------
.......................................................................ATGAGGATGAAGAGGAGATGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------1.00--------------------------------------------
......................................................................................................................................................................................................................................................GGGTTTTGGGGAAGGAGGT.....................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------1.00-------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAGAAAGTTAATGCCATCTT......................................................................2411.001.00------------------------------------1.00-------------------------------------
................................................................................................................................................................................................................................................................................................................................AGATTGAGGGCTGAAAGCAGATATGA....................................................................................................................................................................................2611.001.001.00-------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGCAGGGGATGGC..................................................................................................1611.001.00----------------------------------1.00---------------------------------------
............................................................AGAGGACAATGATGAGGATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--1.00-----------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................TTGAGGGCTGAAAGCAGATATG.....................................................................................................................................................................................2211.001.00------------------------1.00-------------------------------------------------
.............................................................................................................................................................................................GGCAGTTCATGGCTTTGCAGACTAGAGGG....................................................................................................................................................................................................................................................................................................................2911.001.00-----------1.00--------------------------------------------------------------
..........................................................................AGGATGAAGAGGAGATGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.001.00-------------------------------------------------------------------------
........................................................AAGAAGAGGACAATGATTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.001.00-------------------------------------------------------------------------
.......................................................GAAGAAGAGGACAATGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.001.00-------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGGTCGGGCAGGGGATGGC..................................................................................................2211.001.00-----1.00--------------------------------------------------------------------
........................................................AAGAAGAGGACAATGAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.001.00-------------------------------------------------------------------------
...........................................................AAGAGGACAATGATGAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------1.00------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................GTTTCAAGTTTGAGAGTG......................................................................................................................................181.000.00--------------------------------------------1.00-----------------------------
..............................................................................................................................................................................................................................................................................................GAGGGGGTGAAAAGGTTA..............................................................................................................................................................................................................................181.000.00----------------------------1.00---------------------------------------------
...............................................................................................................................................................................................................................................................................TAGAGGCTTTGAACTCTG.............................................................................................................................................................................................................................................181.000.00---------------------------1.00----------------------------------------------
.............................................................................................................................................................................................................................................................................................TGAGGGGGTGAAAAGGGTTGG............................................................................................................................................................................................................................211.000.00-----------------------------------------1.00--------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATGGCTGACTGCCCAGAAAGTTAATGC............................................................................3011.001.00--------------------------------------------------------1.00-----------------
................................................................................................................................................................................................................................................................................................................................AGATTGAGGGCTGAAATTC...........................................................................................................................................................................................191.000.00------------------------------------------1.00-------------------------------
...................................................................AATGATGAGGATGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.001.00-------------------------------------------------------------------------
......................................................................................................................................................................................................................AGGGAAGGGCTTGTTAGTTTGG..................................................................................................................................................................................................................................................................................................221.000.00-----------------------------------------------1.00--------------------------
...............................................................................................GTGATGCCAGCTTATGGACCTACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00------------------------------1.00-------------------------------------------
........................................................................................................................................................................................................................................................................AAAGAACTAGAGGCTTTGAACTG...............................................................................................................................................................................................................................................2311.001.00-------------------------1.00------------------------------------------------
..................................CCAGGAGAGGAAGAGGGTGAGGATTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.002.00--1.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................ACTAGAGGCTTTGAACTGAGGGA..........................................................................................................................................................................................................................................231.000.00--1.00-----------------------------------------------------------------------
...............................................................................................................................................................AGCAGAGCAAGAGAGGGAGGC..........................................................................................................................................................................................................................................................................................................................................................2111.001.00-----1.00--------------------------------------------------------------------
................................CTCCAGGAGAGGAAGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.001.00-----------------------------------------------------------------0.500.50-------
......................................................................................................CAGCTTATGGACCTACAGCTCCTCCCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00-------------------------------------------------------------1.00------------
...............................CCTCCAGGAGAGGAAGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------1.00-----------------------------------------------------------------
.......................................................................................................AGCTTATGGACCTACAGCTCCTCCCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00----1.00---------------------------------------------------------------------
.......................................................................ATGAGGATGAAGAGGAGATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------1.00----------------------------
..........................................................................................................................................................................................................TTTGCAGACTAGAGGGAAGGGC..............................................................................................................................................................................................................................................................................................................2211.001.00------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGCCTGATGCCCCC...............................1811.001.00----------------------------------------1.00---------------------------------
....................................................GAGGAAGAAGAGGACCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00----------------------1.00---------------------------------------------------
.....................................................................................................CCAGCTTATGGACCTACAGCTCCTCCCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00----1.00---------------------------------------------------------------------
.........................................................................................................CTTATGGACCTACAGCTCCTCCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-1.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGAGCCTAGGGTGGGTGAG.............................................................................................................................................................191.000.00---------------------------------------------------------------1.00----------
.........................................................AGAAGAGGACAATGAATTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.001.00-------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................CAGTTTAGGGGCTAGGGTCGGGCAGGGGATGGC..................................................................................................3311.001.00-----------------------------------------------------1.00--------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTCGGGCAGGGGGCA....................................................................................................181.000.00------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGGCTAGGGTCGGGCAGGGGATGGC..................................................................................................2911.001.00-----------------------------------------------------------1.00--------------
...........................................................................................................TATGGACCTACAGCTCCTCCCCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................251.000.00-------------------------------1.00------------------------------------------
..............................................................................................................................................................................................................................................................................................................................GGAGATTGAGGGCTGAAAGCAGATATG.....................................................................................................................................................................................2711.001.00-------1.00------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCAGGGGATGGC..................................................................................................1560.830.83-0.33--------0.170.17-------------------------------------------------------------0.17
................................................................GACAATGATGAGGATGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.500.500.50-------------------------------------------------------------------------
....................................................GAGGAAGAAGAGGACAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.500.50---------0.50----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGTTTAGGGGCT......................................................................................................................1720.500.50-----------------0.50--------------------------------------------------------
.............................................................GAGGACAATGATGAGGATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.330.330.33-------------------------------------------------------------------------
.........................................................................GAGGATGAAGAGGAGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.250.25---------------------------------------------------------------------0.25----
..............................................................AGGACAATGATGAGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.250.25------------------0.25-------------------------------------------------------
......................................................................GATGAGGATGAAGAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.200.200.20-------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCAGACTACTGCC....................1650.200.20----------------------------------------------------------------------0.20---
.............................................................GAGGACAATGATGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1690.110.11-------------------0.11------------------------------------------------------

Antisense strand
GAGGGTGGGACCCCCACCAGAGACCTTCCCACCTCCAGGAGAGGAAGAGGGTGAGGAAGAAGAGGACAATGATGAGGATGAAGAGGAGATGCTCAGTGATGCCAGCTTATGGACCTACAGCTCCTCCCCAGATGAGCAAGTTGGGGTTGAGGGAGAATGAGCAGAGCAAGAGAGGGAGGCAGCTGGCCTGGCAGTTCATGGCTTTGCAGACTAGAGGGAAGGGCTTGTTAGTGTGGAGGGAAGGGTGGGTTTTGGGGAAGGCAAAAAGAACTAGAGGCTTTGAACTGAGGGGGTGAAAAGGGGTGAAGTCAGGTGCAGGGAGATTGAGGGCTGAAAGCAGATATGAATGGGGAGCCTAGGGTGGGGGTAGGGTTGTTTCAAGTTTGAGATCTTTTCAGTTTAGGGGCTAGGGTCGGGCAGGGGATGGCTGACTGCCCAGAAAGTTAATGCCATCTTCCTCTTTGTTCTCCTTTCAGTAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCCCTGTCACCTGCACAC
.........................................................................................................................................................................................................................................................................................................................(((...........(((((((((((((((.((((....((.((((.........)))).))..)))).))))).....))))))))))...(((....)))..)))...........................................................................................................
................................................................................................................................................................................................................................................................................................................305..................................................................................................................422......................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040008(GSM532893)
G727N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM359175(GSM359175)
hela_5_pct. (hela)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCCCCTGTCACCACAA... 192.000.00---2.00----------------------------------------------------------------------
................................................................................................................................................................................................................................................TAGTTCTTTTTGCCTTCCCCAAAACCCACCCTT............................................................................................................................................................................................................................................................. 3311.001.00--------------1.00-----------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGAACAAAGAGGAAGATGGCATTA..................................................... 2911.001.00-----------------------------------1.00--------------------------------------
.....................................................................................................................................................................................................TTCCCTCTAGTCTGCAAAGCCAT.................................................................................................................................................................................................................................................................................................................. 2311.001.00--------------1.00-----------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGTTTAGGGGCCCG.................................................................................................................... 191.000.00--------1.00-----------------------------------------------------------------
..........................................................................................................................................................................................................GCCCTTCCCTCTAGTCTGCAAA.............................................................................................................................................................................................................................................................................................................. 2211.001.00-----------------1.00--------------------------------------------------------
.......GGACCCCCACCAGAGGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00---------------------------------------------------------1.00----------------
............................................................................................CATAAGCTGGCATCACTGA............................................................................................................................................................................................................................................................................................................................................................................................................................... 1911.001.00---------1.00----------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCCTTCCCCTGTCAG........ 181.000.00--------1.00-----------------------------------------------------------------
........................................................................................TAAGCTGGCATCACTGAGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................. 2111.001.00----------------------------------------------------------1.00---------------
................................................................................................................................................................................TGAACTGCCAGGCCAGCTGCCT........................................................................................................................................................................................................................................................................................................................................ 2211.001.00---------1.00----------------------------------------------------------------
........................................................................................................................CTCATCTGGGGAGGAG...................................................................................................................................................................................................................................................................................................................................................................................................... 1631.001.00----------------------------------------------------------------0.67--0.33------
.................................................................................................................................................................................................................................................................CTAGTTCTTTTTGCCTT............................................................................................................................................................................................................................................................ 1730.330.33--------------------------------------------------------------------0.33-----
...............................................................................................................................CAACTTGCTCATCTGG............................................................................................................................................................................................................................................................................................................................................................................................... 1650.200.20-----------------------------------------------------------------------0.20--
...........................................................................................AAGCTGGCATCACTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................. 1760.170.17------------------------------------------------------------------------0.17-