ID: uc001iay.1_intron_2_0_chr1_245018911_r
GENE: HNRNPU(8)
chr1:245018861-245019255-


(1)
AGO2.ip 		(10)
B-CELL 		(5)
BRAIN 		(5)
BREAST 		(21)
CELL-LINE 		(2)
CERVIX 		(4)
HEART 		(4)
HELA 		(8)
LIVER 		(2)
OTHER 		(1)
OTHER.ip 		(1)
RRP40.ip 		(21)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
TAGAGGACGTGGAGGATTCAATATGCGTGGTGGAAATTTCAGAGGAGGAGGCAAGTTAATTTTGAGTGTTCTGTATTTAGTTCAGGATCGAAACAAGTGATAATTTTATAGTTTGGATGTAGCTGAAGTTTCTTCCTCATTAATGGTATACTGTCACAGTAACTAAAGTATTCATGTGATTTGATATTAAATACACCTAGGTTATGTTAATGGTTAGAATTAAACATTTCTTTTGTCTTTAAACAATTATTTTTGGAGAAAAAGGAACAATCTAGAGGAATCCTAAGTCTTCTGTATAAGTAGGGTACAATATACAATGAAACTAAAACAGCTCTTGTCTTTTAGCCCCTGGGAATCGTGGCGGATATAATAGGAGGGGCAACATGCCACAGAGA
..............................................................................................................................................................................................................................................................(((((...((((....((.....)).))))...))))).(((((.(((...)))..))))).......((((((..((....)).))))))..................................................
.....................................................................................................................................................................................................................................................246................................................................................................345................................................
SizePerfect hitTotal NormPerfect NormSRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189782DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM532886(GSM532886)
G850T. (cervix)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR040015(GSM532900)
G623T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
..............................................................................................................................................................................................................................................................................................................GGGTACAATATACAATGAAACTAAAACAGCT..............................................................31117.0017.00----9.00--8.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................GTAGGGTACAATATACAATGAAACT.......................................................................25110.0010.00---10.00------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGGAATCGTGGCGGATATA..........................1914.004.002.00--------1.00------------------1.00-----------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................CTGGGAATCGTGGCGGATA............................1914.004.00-1.00--------------------------------------------1.00--------------1.00--------1.00-----------------
.AGAGGACGTGGAGGATTCAAT.....................................................................................................................................................................................................................................................................................................................................................................................2114.004.00-----1.00--------------------------------1.00------1.00-------------------------------------1.00----
..................................................GCAAGTTAATTTTGAGTGTTCTGTATTTAGTTCAGGATCGAAACAAGTGATAATTTTATAGTTTGGATGTAGCTGAAGTTTCTTCCTCATT..............................................................................................................................................................................................................................................................9114.004.00--------------4.00-------------------------------------------------------------------------
.AGAGGACGTGGAGGATT.........................................................................................................................................................................................................................................................................................................................................................................................1714.004.00-----3.00--------------------------------------1.00-------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TGGGAATCGTGGCGGATA............................1813.003.001.002.00--------------------------------------------------------------------------------------
...........................TGGTGGAAATTTCAGAGGAGG...........................................................................................................................................................................................................................................................................................................................................................2113.003.00------1.00--------------------------1.00--------------1.00---------------------------------------
.................................................................................................................................................................................................................................................................................AGAGGAATCCTAAGTCTT........................................................................................................1813.003.00------3.00---------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGGAATCGTGGCGGATATAA.........................2013.003.002.001.00--------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................TATAATAGGAGGGGCAAC............1812.002.00-----2.00----------------------------------------------------------------------------------
..................................................GCAAGTTAATTTTGAGTGTTCTGTATTTAGTT.........................................................................................................................................................................................................................................................................................................................3212.002.00------------1.00------------------------------------1.00--------------------------------------
.......CGTGGAGGATTCAATATG..................................................................................................................................................................................................................................................................................................................................................................................1812.002.002.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................GAATCCTAAGTCTTCTGTATAAGTAGGG..........................................................................................2812.002.00----------------2.00-----------------------------------------------------------------------
..................CAATATGCGTGGTGGAAATTTCAGAGGAGGAG.........................................................................................................................................................................................................................................................................................................................................................3212.002.00--------1.00---------------------------1.00---------------------------------------------------
............AGGATTCAATATGCGTGGTGGAAACTTC...................................................................................................................................................................................................................................................................................................................................................................282.000.00--2.00-------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................CTGGGAATCGTGGCGGATATA..........................2112.002.00-------------1.00----------------------------------------1.00---------------------------------
.................................................GGCAAGTTAATTTTGAGTG.......................................................................................................................................................................................................................................................................................................................................1912.002.00------------1.00-----1.00---------------------------------------------------------------------
.....................TATGCGTGGTGGAAATTTCAGAGG..............................................................................................................................................................................................................................................................................................................................................................2412.002.00---------------2.00------------------------------------------------------------------------
.........TGGAGGATTCAATATGCGTGGTG...........................................................................................................................................................................................................................................................................................................................................................................2312.002.00-----------------2.00----------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................GATATAATAGGAGGGGCA..............1812.002.00--------------------2.00-------------------------------------------------------------------
.AGAGGACGTGGAGGATTC........................................................................................................................................................................................................................................................................................................................................................................................1812.002.00--------------------------------------------------1.00-------------------------1.00-----------
......ACGTGGAGGATTCAATATG..................................................................................................................................................................................................................................................................................................................................................................................1912.002.00-------------------2.00--------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................GGATATAATAGGAGGGGCAACATGC........2512.002.00----------2.00-----------------------------------------------------------------------------
..................................................GCAAGTTAATTTTGAGTG.......................................................................................................................................................................................................................................................................................................................................1812.002.00------------------------1.00--------------------------------------1.00------------------------
.................TCAATATGCGTGGTGGAAATTTCAGAGGAGG...........................................................................................................................................................................................................................................................................................................................................................3112.002.00--2.00-------------------------------------------------------------------------------------
...AGGACGTGGAGGATTCAATATGC.................................................................................................................................................................................................................................................................................................................................................................................2312.002.00----------2.00-----------------------------------------------------------------------------
.AGAGGACGTGGAGGATTCA.......................................................................................................................................................................................................................................................................................................................................................................................1912.002.001.00-----------------------------------------------------------------------------1.00---------
......................................................................................................ATTTTATAGTTTGGATGTAGCTGAAGTCTG.......................................................................................................................................................................................................................................................................302.000.00--------------------------2.00-------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGGAATCGTGGCGGATAT...........................1812.002.002.00---------------------------------------------------------------------------------------
.......CGTGGAGGATTCAATATGCGTGGT............................................................................................................................................................................................................................................................................................................................................................................2411.001.00--------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................TAGGTTATGTTAATGGTTA...................................................................................................................................................................................1911.001.00---------1.00------------------------------------------------------------------------------
.AGAGGACGTGGAGGATTT........................................................................................................................................................................................................................................................................................................................................................................................1811.004.00-1.00--------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................GCGGATATAATAGGAGGGGCAACATGCCACAG...3211.001.00----------------------------------------------------1.00-----------------------------------
....................................................................................................................................................................................................................................................................................................................................................................CGTGGCGGATATAATAGGAGGGGCAACATG.........3011.001.00--------1.00-------------------------------------------------------------------------------
...............................GGAAATTTCAGAGGAGGAG.........................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------1.00-----------------------------------------------------------------
...AGGACGTGGAGGATTCAATATGCGTG..............................................................................................................................................................................................................................................................................................................................................................................2611.001.00-------------------------------------------------------------------1.00--------------------
..................................................................................................................................................................................................................................................ACAATTATTTTTGGAGAAAAAG...................................................................................................................................2211.001.00------1.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................ATTTTTGGAGAAAAAGGGTTA..............................................................................................................................211.000.00--1.00-------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................TGGCGGATATAATAGGAGGGGCAACATGCCAC.....3211.001.00--1.00-------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................CTGTATAAGTAGGGTACAATAT..................................................................................2211.001.00----------------------------------------------------------1.00-----------------------------
.....................TATGCGTGGTGGAAATTTCAGAGGAGGAG.........................................................................................................................................................................................................................................................................................................................................................2911.001.00----------------------------------------------------------------1.00-----------------------
.........................................................................................................................................................................................................................................................................................................................................................CCCCTGGGAATCGTGGCGGA..............................2011.001.00-------------1.00--------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................CCTGGGAATCGTGGCGGAT.............................1911.001.00-1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................ATCGTGGCGGATATAATAG......................1911.001.00----------------1.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TGGGAATCGTGGCGGATATAATAGGAGGGGCA..............3211.001.00---------------------------------------1.00------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CCCCTGGGAATCGTGGCGG...............................1911.001.00---------------------------------------------------------------------------------1.00------
.......................................................................................................................................................................................................................................................................................................................................................................GGCGGATATAATAGGAGGGGCAACATGCC.......2911.001.00-------------------------------1.00--------------------------------------------------------
....................................................................................................TAATTTTATAGTTTGGATGTAGC................................................................................................................................................................................................................................................................................2311.001.00------------------------------------------------------------------1.00---------------------
..............................................................................................................................................................................................................................................................................................................................................................................ATAATAGGAGGGGCAACATGCCAC.....2411.001.00--1.00-------------------------------------------------------------------------------------
..............................................................................................AAGTGATAATTTTATAGTTT.........................................................................................................................................................................................................................................................................................2011.001.00------1.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................CTGGGAATCGTGGCGGAT.............................1811.001.00-------------1.00--------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGCAACATGGTG......181.000.00-------------------------------------------1.00--------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................GCGGATATAATAGGAGGGGCAACAT..........2511.001.00--------1.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................CCTGGGAATCGTGGCGCA..............................181.000.00-1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................ACAATGAAACTAAAACAGC...............................................................1911.001.00---------------------------------------------------------1.00------------------------------
................................................................................................................................................................................................................................................................................................................................................................GAATCGTGGCGGATATAATAGGAGGGGCAAC............3111.001.00-----------------------------------1.00----------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................CCTGGGAATCGTGGCGGATATAA.........................2311.001.00-------------------------------------1.00--------------------------------------------------
.............................................................................................................................................................................................................................................................TGGAGAAAAAGGAACAATCTAG........................................................................................................................2211.001.00------------1.00---------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGGAATCGTGGCGGATATAATAGGAGGGG................2911.001.00----------------------------------1.00-----------------------------------------------------
.AGAGGACGTGGAGGACTCA.......................................................................................................................................................................................................................................................................................................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------
...............ATTCAATATGCGTGGTGGAAATTTCAG.................................................................................................................................................................................................................................................................................................................................................................2711.001.00---------------------------1.00------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................CGGATATAATAGGAGGGGCAACATG.........2511.001.00---------------------------------------------------1.00------------------------------------
..............................TGGAAATTTCAGAGGAGGAGCCCC.....................................................................................................................................................................................................................................................................................................................................................241.000.00----------------------1.00-----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................GCGGATATAATAGGAGCTT................191.000.00----------------------------------------------------------------------------------1.00-----
............................................................................................................................................................................................................................................................................................................................................................CTGGGAATCGTGGCGGATATAA.........................2211.001.001.00---------------------------------------------------------------------------------------
......................ATGCGTGGTGGAAATTCAAT.................................................................................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................CGTGGCGGATATAATAGGA....................1921.001.00-0.50-----------------------------0.50--------------------------------------------------------
................................................................................................................TTGGATGTAGCTGAAGTC.........................................................................................................................................................................................................................................................................181.000.00-----------------------------------------1.00----------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TGGGAATCGTGGCGGATATAAT........................2211.001.00-1.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGGAATCGTGGCGGATATAATAGGAGGGGC...............3011.001.00------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................................................................................................................................GTACAATATACAATGAAACTAAAACAGCTC.............................................................3011.001.00-----------------------------------------------1.00----------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................AATAGGAGGGGCAACTGT.........181.000.00--------------------------------1.00-------------------------------------------------------
..GAGGACGTGGAGGATTCAATATGCGT...............................................................................................................................................................................................................................................................................................................................................................................2611.001.00-----------------------------1.00----------------------------------------------------------
.........................................GAGGAGGAGGCAAGTATTG...............................................................................................................................................................................................................................................................................................................................................191.000.00-----------------1.00----------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TGGGAATCGTGGCGGATATAA.........................2111.001.00-1.00--------------------------------------------------------------------------------------
..................CAATATGCGTGGTGGAAATT.....................................................................................................................................................................................................................................................................................................................................................................2011.001.001.00---------------------------------------------------------------------------------------
.AGAGGACGTGGAGGATTA........................................................................................................................................................................................................................................................................................................................................................................................1811.004.001.00---------------------------------------------------------------------------------------
................................GAAATTTCAGAGGAGGAGGCAAG....................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------1.00-------------
.........................................................................................................................................................................................................................................................................................................................................................CCCCTGGGAATCGTGGC.................................1711.001.00---------------------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................ATAGGAGGGGCAACATG.........1711.001.00-----1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................TCGTGGCGGATATAATAGGAGGGGCAACATG.........3111.001.00----------------------------------------1.00-----------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................TGGCGGATATAATAGGAGGGGCAAC............2511.001.00--------1.00-------------------------------------------------------------------------------
.......................TGCGTGGTGGAAATTTCAGA................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------1.00----------------------------------------------------------------
............AGGATTCAATATGCGTGGTGGATA.......................................................................................................................................................................................................................................................................................................................................................................241.000.00-----------------------------------------------------1.00----------------------------------
..............................................................................AGTTCAGGATCGAAACAAGTG........................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------1.00----------------
...............ATTCAATATGCGTGGTGGAAATTTCAGA................................................................................................................................................................................................................................................................................................................................................................2811.001.00---------------------------------------------------------------------------1.00------------
....................ATATGCGTGGTGGAAATTTCAGAGGA.............................................................................................................................................................................................................................................................................................................................................................2611.001.00----------1.00-----------------------------------------------------------------------------
..........................................................................................................TATAGTTTGGATGTAGCTGAAGTTTC.......................................................................................................................................................................................................................................................................2611.001.00--------------------------------------------------------------------1.00-------------------
...AGGACGTGGAGGATTCAA......................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----1.00----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................CCCTGGGAATCGTGGCGGATATAA.........................2411.001.00--------------------------------------------------------------------------------1.00-------
............................................................................................................................................................................................................................................................................................................................................................CTGGGAATCGTGGCGGATATAATAGGAGG..................2911.001.00--------1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................AGGGTACAATATACAATGAAAC........................................................................2211.001.00-------------------------------------------------------------------------------1.00--------
............................................................................................................................................................................................................................................................................................................................................................................ATATAATAGGAGGGGCAACATG.........2211.001.00-----------1.00----------------------------------------------------------------------------
...................AATATGCGTGGTGGAAATTT....................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------1.00------------------
...AGGACGTGGAGGATTCAATAG...................................................................................................................................................................................................................................................................................................................................................................................211.000.00-----------------------------------------------------------------1.00----------------------
............................................................TTTGAGTGTTCTGTATTTAGTT.........................................................................................................................................................................................................................................................................................................................2211.001.00------------1.00---------------------------------------------------------------------------
...............ATTCAATATGCGTGGTGGAA........................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------1.00----------------------------------------------------------------
.....................TATGCGTGGTGGAAATTTCAGAGGAGG...........................................................................................................................................................................................................................................................................................................................................................2711.001.00--1.00-------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TGGGAATCGTGGCGGATATA..........................2011.001.00---------1.00------------------------------------------------------------------------------
.AGAGGACGTGGAGGACCC........................................................................................................................................................................................................................................................................................................................................................................................181.000.00--1.00-------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................TATAATAGGAGGGGCAACAT..........2011.001.00-------------------------------------------------------------------------1.00--------------
.................................AAATTTCAGAGGAGGAG.........................................................................................................................................................................................................................................................................................................................................................1711.001.00-----------------------------------------------------------------------------1.00----------
...........................................................................................................................................................................................................................................................................................................................................................CCTGGGAATCGTGGCGGATA............................2011.001.00-1.00--------------------------------------------------------------------------------------
.....................TATGCGTGGTGGAAATTTCAGAGGAGGA..........................................................................................................................................................................................................................................................................................................................................................2811.001.00---------------1.00------------------------------------------------------------------------
............................................................................................................................................................................................................................................................TTGGAGAAAAAGGAACAATCTAGAGGAA...................................................................................................................2811.001.00---------1.00------------------------------------------------------------------------------
....GGACGTGGAGGATTCAG......................................................................................................................................................................................................................................................................................................................................................................................171.000.00------------------1.00---------------------------------------------------------------------
............................GGTGGAAATTTCAGAGGAGGAG.........................................................................................................................................................................................................................................................................................................................................................2211.001.00------------------------------------------1.00---------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................AATCGTGGCGGATATAATAGGAGGGG................2611.001.00---------------1.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GGGAATCGTGGCGGATATTT.........................2011.002.001.00---------------------------------------------------------------------------------------
..GAGGACGTGGAGGATTCAATATG..................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------------1.00------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TGGGAATCGTGGCGGATAT...........................1911.001.00----------------------------1.00-----------------------------------------------------------
..................CAATATGCGTGGTGGAAATTTCAGAGG..............................................................................................................................................................................................................................................................................................................................................................2711.001.00------------------1.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................GTATAAGTAGGGTACAATATACA...............................................................................2311.001.00---------1.00------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TACAATGAAACTAAAACAGCTCT............................................................2311.001.00-------------------1.00--------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................CGTGGCGGATATAATAG......................1720.500.50------------------------------0.50---------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................GTGGCGGATATAATAGGAGGG.................2120.500.50-------------------------------------------------------------------------------------0.50--
..GAGGACGTGGAGGATTC........................................................................................................................................................................................................................................................................................................................................................................................1720.500.50-----------------------------0.50----------------------------------------------------------
........................................AGAGGAGGAGGCAAGTTA.................................................................................................................................................................................................................................................................................................................................................1820.500.50--------------------------------0.50-------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................TGGCGGATATAATAGGAGGG.................2020.500.50--------------------------------------------------------------------------------------0.50-
...AGGACGTGGAGGATTC........................................................................................................................................................................................................................................................................................................................................................................................1620.500.50---------------------------------0.50------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................CGGATATAATAGGAGG..................1620.500.50------------------------------------------------------------------------------------0.50---
.................................................................................................................................................................................................................................................AACAATTATTTTTGGAGA........................................................................................................................................1820.500.50--------------------0.50-------------------------------------------------------------------
....................................................................................................................................................................................................................................................AATTATTTTTGGAGAAAAA....................................................................................................................................1920.500.50---------0.50------------------------------------------------------------------------------
.........TGGAGGATTCAATATG..................................................................................................................................................................................................................................................................................................................................................................................1630.330.33----------------0.33-----------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................CAACATGCCACAGAGA1670.290.29---------------------------------------------------------------------------------------0.29
...AGGACGTGGAGGATT.........................................................................................................................................................................................................................................................................................................................................................................................1540.250.25----------------------------------0.25-----------------------------------------------------
...............................................................................................................................................TGGTATACTGTCACAG............................................................................................................................................................................................................................................1640.250.25----------------0.25-----------------------------------------------------------------------

Antisense strand
TAGAGGACGTGGAGGATTCAATATGCGTGGTGGAAATTTCAGAGGAGGAGGCAAGTTAATTTTGAGTGTTCTGTATTTAGTTCAGGATCGAAACAAGTGATAATTTTATAGTTTGGATGTAGCTGAAGTTTCTTCCTCATTAATGGTATACTGTCACAGTAACTAAAGTATTCATGTGATTTGATATTAAATACACCTAGGTTATGTTAATGGTTAGAATTAAACATTTCTTTTGTCTTTAAACAATTATTTTTGGAGAAAAAGGAACAATCTAGAGGAATCCTAAGTCTTCTGTATAAGTAGGGTACAATATACAATGAAACTAAAACAGCTCTTGTCTTTTAGCCCCTGGGAATCGTGGCGGATATAATAGGAGGGGCAACATGCCACAGAGA
..............................................................................................................................................................................................................................................................(((((...((((....((.....)).))))...))))).(((((.(((...)))..))))).......((((((..((....)).))))))..................................................
.....................................................................................................................................................................................................................................................246................................................................................................345................................................
SizePerfect hitTotal NormPerfect NormSRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189782DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		GSM532886(GSM532886)
G850T. (cervix)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR040015(GSM532900)
G623T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
....................................................................................................................................................................................................................................................................................................................................................TTTAGCCCCTGGGAATTG..................................... 181.000.00-----------1.00----------------------------------------------------------------------------
..............................TGGAAATTTCAGAGGAGTA.......................................................................................................................................................................................................................................................................................................................................................... 191.000.00------------------------------------------------------------1.00---------------------------
....................................................................................................................................................................................................................................................................................................................................................TTTAGCCCCTGGGAACTC..................................... 181.000.00-----------1.00----------------------------------------------------------------------------
......................................................................................................................................................................AGTATTCATGTGATTAACG.................................................................................................................................................................................................................. 191.000.00-----------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................TTTAGCCCCTGGGAATGC..................................... 181.000.00-----------1.00----------------------------------------------------------------------------