uc001hzv.1_intron_7_0_chr1_243319650

CTCAGACTCCAAGGTCAAAAGTATGACCTCAGCTCATGGCTCTGCTTCAGGTAAATTGGATCCAGATTTCTAATAGCATTAGCATGTTGTATATTTGGGGGCTCCTTTTTTTTTTTAAAAAAAAAAGTAAGGTTCTAGTTGTCTTCCCAAGATACTCATTCAAAACAAAAGTTATGATATACGGGGCAGCGGCGGTGGGGGGTCTATAAAACAGTTTTATTTAGCATAGTAAATGGAAAATCAGAAGTTA ..................................................................................................((((((((((((((((....))))))))...........((((.((.(((...(((.((((....(((....))))))))))...))).))))))....))))))))............................................. .................................................................................................98...........................................................................................................207.........................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood)	GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain)	DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR189783	SRR189782	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	GSM450610(GSM450610) miRNA sequencing raw reads from post-mortem s. (brain)	SRR553573(SRX182779) source: Cerebellum. (Cerebellum)	DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line)
......................................................................................................TCCTTTTTTTTTTTAAAATG................................................................................................................................	20		12.00	0.00	8.00	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TCCTTTTTTTTTTTAAAAGG................................................................................................................................	20		8.00	0.00	1.00	6.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TCCTTTTTTTTTTTAAAATAAG..............................................................................................................................	22		3.00	0.00	1.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................CCTTTTTTTTTTTAAAAACAG..............................................................................................................................	21		2.00	0.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................AAAGTAAGGTTCTAGTTGTCTTCCC......................................................................................................	25	1	2.00	2.00	-	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................................CCTTTTTTTTTTTAAAATAAG..............................................................................................................................	21		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................CCTTTTTTTTTTTAAAAACGG..............................................................................................................................	21		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTAAAACC................................................................................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTAATCAG................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................ACCTCAGCTCATGGCTCTGCTTT..........................................................................................................................................................................................................	23		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTAAAATACA..............................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................CCTTTTTTTTTTTAAAAACG...............................................................................................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTATATG.................................................................................................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TCCTTTTTTTTTTTAAAAGGG...............................................................................................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTATTTG.................................................................................................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................CCTTTTTTTTTTTAAAAATTGG.............................................................................................................................	22		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................GCTCCTTTTTTTTTTTATTG..................................................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................................GCAGCGGCGGTGGGGGGT...............................................	18	1	1.00	1.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTATTAG.................................................................................................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TCCTTTTTTTTTTTAAAATGCT..............................................................................................................................	22		1.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
......................................................................................................TCCTTTTTTTTTTTAAAACG................................................................................................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................TTTTTTTTTTTAAAAAAAAAATCG.........................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................CCTTTTTTTTTTTAAAAAAAAATA...........................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TCCTTTTTTTTTTTACACG.................................................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................CCTTTTTTTTTTTAAAACG................................................................................................................................	19		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTAATTTG................................................................................................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TCCTTTTTTTTTTTACTAG.................................................................................................................................	19		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................GGCTCCTTTTTTTTTTCTA....................................................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................GGCTCCTTTTTTTTTTGGGT...................................................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTAAAATAAA..............................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................CTTTTTTTTTTTAAAAAAACCG............................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TCCTTTTTTTTTTTACATC.................................................................................................................................	19		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTAAAAGG................................................................................................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTAAAATG................................................................................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................CTCCTTTTTTTTTTTATTAA.................................................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................TCCTTTTTTTTTTTAAAACAG...............................................................................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
....................GTATGACCTCAGCTCATGGC..................................................................................................................................................................................................................	20	2	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	0.50	-	-
.................................TCATGGCTCTGCTTCAG........................................................................................................................................................................................................	17	3	0.33	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	0.33	-

CTCAGACTCCAAGGTCAAAAGTATGACCTCAGCTCATGGCTCTGCTTCAGGTAAATTGGATCCAGATTTCTAATAGCATTAGCATGTTGTATATTTGGGGGCTCCTTTTTTTTTTTAAAAAAAAAAGTAAGGTTCTAGTTGTCTTCCCAAGATACTCATTCAAAACAAAAGTTATGATATACGGGGCAGCGGCGGTGGGGGGTCTATAAAACAGTTTTATTTAGCATAGTAAATGGAAAATCAGAAGTTA
..................................................................................................((((((((((((((((....))))))))...........((((.((.(((...(((.((((....(((....))))))))))...))).))))))....)))))))).............................................
.................................................................................................98...........................................................................................................207.........................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR189783

SRR189782

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

......................................................................................................TCCTTTTTTTTTTTAAAATG................................................................................................................................

12.00

0.00

8.00

4.00

......................................................................................................TCCTTTTTTTTTTTAAAAGG................................................................................................................................

8.00

0.00

1.00

6.00

1.00

......................................................................................................TCCTTTTTTTTTTTAAAATAAG..............................................................................................................................

3.00

0.00

1.00

2.00

.......................................................................................................CCTTTTTTTTTTTAAAAACAG..............................................................................................................................

2.00

0.00

1.00

...........................................................................................................................AAAGTAAGGTTCTAGTTGTCTTCCC......................................................................................................

2.00

.......................................................................................................CCTTTTTTTTTTTAAAATAAG..............................................................................................................................

2.00

0.00

2.00

.......................................................................................................CCTTTTTTTTTTTAAAAACGG..............................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTAAAACC................................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTAATCAG................................................................................................................................

1.00

0.00

1.00

.........................ACCTCAGCTCATGGCTCTGCTTT..........................................................................................................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTAAAATACA..............................................................................................................................

1.00

0.00

1.00

.......................................................................................................CCTTTTTTTTTTTAAAAACG...............................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTATATG.................................................................................................................................

1.00

0.00

1.00

......................................................................................................TCCTTTTTTTTTTTAAAAGGG...............................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTATTTG.................................................................................................................................

1.00

0.00

1.00

.......................................................................................................CCTTTTTTTTTTTAAAAATTGG.............................................................................................................................

1.00

0.00

1.00

....................................................................................................GCTCCTTTTTTTTTTTATTG..................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................................................GCAGCGGCGGTGGGGGGT...............................................

1.00

.....................................................................................................CTCCTTTTTTTTTTTATTAG.................................................................................................................................

1.00

0.00

1.00

......................................................................................................TCCTTTTTTTTTTTAAAATGCT..............................................................................................................................

1.00

0.00

1.00

......................................................................................................TCCTTTTTTTTTTTAAAACG................................................................................................................................

1.00

0.00

1.00

.........................................................................................................TTTTTTTTTTTAAAAAAAAAATCG.........................................................................................................................

1.00

0.00

1.00

.......................................................................................................CCTTTTTTTTTTTAAAAAAAAATA...........................................................................................................................

1.00

0.00

1.00

......................................................................................................TCCTTTTTTTTTTTACACG.................................................................................................................................

1.00

0.00

1.00

.......................................................................................................CCTTTTTTTTTTTAAAACG................................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTAATTTG................................................................................................................................

1.00

0.00

1.00

......................................................................................................TCCTTTTTTTTTTTACTAG.................................................................................................................................

1.00

0.00

1.00

...................................................................................................GGCTCCTTTTTTTTTTCTA....................................................................................................................................

1.00

0.00

1.00

...................................................................................................GGCTCCTTTTTTTTTTGGGT...................................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTAAAATAAA..............................................................................................................................

1.00

0.00

1.00

........................................................................................................CTTTTTTTTTTTAAAAAAACCG............................................................................................................................

1.00

0.00

1.00

......................................................................................................TCCTTTTTTTTTTTACATC.................................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTAAAAGG................................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTAAAATG................................................................................................................................

1.00

0.00

1.00

.....................................................................................................CTCCTTTTTTTTTTTATTAA.................................................................................................................................

1.00

0.00

1.00

......................................................................................................TCCTTTTTTTTTTTAAAACAG...............................................................................................................................

1.00

0.00

1.00

....................GTATGACCTCAGCTCATGGC..................................................................................................................................................................................................................

0.50

.................................TCATGGCTCTGCTTCAG........................................................................................................................................................................................................

0.33