| (1) AGO2.ip | (4) B-CELL | (1) BRAIN | (3) BREAST | (15) CELL-LINE | (1) CERVIX | (1) HEART | (2) HELA | (2) OTHER | (5) SKIN | (1) TESTES | (2) XRN.ip |
| ATTAACAATACAAATTTTTTCATCAACTCATGTGATGTTCTAGAAACAAAGATTTTGCATTTTTTTGTTTGTTTTCTGTAGTTAGATGGTTGTTACTGAAAATGTTGGGCAATTTGGGGTGGTTTTCTCTGGGTTTTATTCTTGATCATAGACTGTTCAGATTAAGTGAAATCATTTGATAACTATGTTGAACCCTGTAGTTTTTAGCAGATTCTGATACTTCTTTGATGCTCAGCCTGAATCATCCACT ...................................................................................................................................................((((...((((((((((((((....)))))))).......)))))).)))).................................................... ......................................................................................................................................135..............................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR029128(GSM416757) H520. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR189782 | SRR033725(GSM497070) Unmutated CLL (CLLU626). (B cell) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001482(DRX001036) "Hela long total cell fraction, control". (hela) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | GSM359202(GSM359202) hepg2_untreated_a. (cell line) | SRR330888(SRX091726) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | GSM532888(GSM532888) G761T. (cervix) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR390723(GSM850202) total small RNA. (cell line) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553576(SRX182782) source: Testis. (testes) | SRR189786 | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | TAX577744(Rovira) total RNA. (breast) | GSM359191(GSM359191) HepG2_3pM_5. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | GSM359203(GSM359203) hepg2_untreated_b. (cell line) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................TTTGATAACTATGTTGAACCCTGTAG.................................................. | 26 | 1 | 6.00 | 6.00 | - | - | - | - | 1.00 | - | - | - | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................TATTCTTGATCATAGACTGTTCAGATTAAGTGAAATCATTTGATAACTATGTTGAACCCTGTAG.................................................. | 64 | 1 | 6.00 | 6.00 | - | - | 5.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TCTTGATCATAGACTAAAT............................................................................................ | 19 | 4.00 | 0.00 | - | - | - | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................TTTGATAACTATGTTGAA.......................................................... | 18 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - |
| .....................................................................TGTTTTCTGTAGTTAGCAT.................................................................................................................................................................. | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................TGTTTTCTGTAGTTAGCATA................................................................................................................................................................. | 20 | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................ATTTTTTTGTTTGTTTTCTTGCG......................................................................................................................................................................... | 23 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................TTTTTTTGTTTGTTTTCTGTAGTTAGATGGT................................................................................................................................................................ | 31 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................AAATGTTGGGCAATTTGGGGTGGTTTTCCC......................................................................................................................... | 30 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................TTTTTTTGTTTGTTTTCTGGGG......................................................................................................................................................................... | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................TTTAGCAGATTCTGATACTTCT.......................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................ATTTTTTTGTTTGTTTTCTGTTAT........................................................................................................................................................................ | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................TTCTTGATCATAGACTA............................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................TTTTTTTGTTTGTTTTCTGACGT........................................................................................................................................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................TGTTTGTTTTCTGTATGGG...................................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................TAGCAGATTCTGATACTTCTTTGATGC................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................CATTTGATAACTATGTTGAACCCTGTAG.................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TTGTTTGTTTTCTGTAGTTAGATGG................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................CTGAAAATGTTGGGCAATTTGGGGTGG................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................TTTCTGTAGTTAGATGATT............................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................TTTTGTTTGTTTTCTGAACT........................................................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ...........................................................................CTGTAGTTAGATGGTTACTG........................................................................................................................................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TTGATAACTATGTTGAACCCTGT.................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TTTTTTGTTTGTTTTCTGTGAGC....................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................TTTTTTGTTTGTTTTCTCGCC......................................................................................................................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................TCTTGATCATAGACTAA.............................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TGCATTTTTTTGTTTGTTTTCTGGCT......................................................................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................TTTTTTGTTTGTTTTCGGC........................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................TAGACTGTTCAGATTAAGTGA................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................ATTTTTTTGTTTGTTTTCGCT........................................................................................................................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................TTTTTTTGTTTGTTTTCGGC........................................................................................................................................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................TTCTTGATCATAGACTAAA............................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................TCTTGATCATAGACTATC............................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................TGTTTTCTGTAGTTAGCA................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................TTTTTTTGTTTGTTTTCAGTG.......................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................TTTTTTTGTTTGTTTTCTGTAGTTAGATGGTT............................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TCTTGATCATAGACTAAA............................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................CAGATTCTGATACTTCTTTG....................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TAGACTGTTCAGATTCTG.................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................TTTTTTGTTTGTTTTCTGTAG......................................................................................................................................................................... | 21 | 4 | 0.25 | 0.25 | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................CATAGACTGTTCAGA......................................................................................... | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - |
| .......................................................................................................................................................................................................GTTTTTAGCAGATTC.................................... | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |
| ATTAACAATACAAATTTTTTCATCAACTCATGTGATGTTCTAGAAACAAAGATTTTGCATTTTTTTGTTTGTTTTCTGTAGTTAGATGGTTGTTACTGAAAATGTTGGGCAATTTGGGGTGGTTTTCTCTGGGTTTTATTCTTGATCATAGACTGTTCAGATTAAGTGAAATCATTTGATAACTATGTTGAACCCTGTAGTTTTTAGCAGATTCTGATACTTCTTTGATGCTCAGCCTGAATCATCCACT ...................................................................................................................................................((((...((((((((((((((....)))))))).......)))))).)))).................................................... ......................................................................................................................................135..............................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR029128(GSM416757) H520. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR189782 | SRR033725(GSM497070) Unmutated CLL (CLLU626). (B cell) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001482(DRX001036) "Hela long total cell fraction, control". (hela) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | GSM359202(GSM359202) hepg2_untreated_a. (cell line) | SRR330888(SRX091726) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | GSM532888(GSM532888) G761T. (cervix) | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR033726(GSM497071) Mututated CLL (CLLM633). (B cell) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR390723(GSM850202) total small RNA. (cell line) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | SRR553576(SRX182782) source: Testis. (testes) | SRR189786 | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | TAX577744(Rovira) total RNA. (breast) | GSM359191(GSM359191) HepG2_3pM_5. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | GSM359203(GSM359203) hepg2_untreated_b. (cell line) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................................ATGTTGAACCCTGTAGTCGCC............................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ......................................................TTGCATTTTTTTGTTGTTC................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................TTAGCAGATTCTGATACGTG........................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |