ID: uc001hxu.1_intron_1_0_chr1_236572575_f.3p
GENE: EDARADD(2)
chr1:236577360-236577609+


(1)
AGO1.ip
(2)
AGO2.ip
(24)
B-CELL
(1)
BRAIN
(41)
BREAST
(21)
CELL-LINE
(1)
FIBROBLAST
(1)
HEART
(10)
LIVER
(10)
OTHER
(14)
SKIN
(2)
UTERUS

Sense strand
TTAACCTCTTGTCAACCTTGATTTCATTCCTGTCGACTGAGAATAAACACAATCAATGGATAAGGCCAGTTGATAAGTTTGAGGTTAAACATTTTCAAGTTTTTAATTGAAGTCATAACTTTCCCAAGACAAAGCTTTCTTTTCACTTTGATCTTACATGGCATTTAAAAATAATTCTCCTCTTTTGTTGGTTTCTACAGTCAGACAAATATCCCATTCAAGATACGGAACTCCCTAAAGGTATGTACAG
...............................................................................................................................(((((((...........))))).)).................................................................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189787SRR189784SRR189785SRR037937(GSM510475)
293cand2. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189783SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR189786TAX577743(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577738(Rovira)
total RNA. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
TAX577745(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191441(GSM715551)
106genomic small RNA (size selected RNA from . (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191542(GSM715652)
64genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR191484(GSM715594)
12genomic small RNA (size selected RNA from t. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR191424(GSM715534)
138genomic small RNA (size selected RNA from . (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR191530(GSM715640)
132genomic small RNA (size selected RNA from . (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR343337SRR191446(GSM715556)
140genomic small RNA (size selected RNA from . (breast)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
...............................................................................................................................................................................................TTTCTACAGTCAGACGATC........................................19751.000.00225.00198.00112.0043.0021.00-11.0010.008.007.0011.002.007.008.001.001.002.003.00-2.001.001.004.002.003.004.004.002.001.00-1.002.002.002.00-3.002.002.001.002.00-1.001.00--2.001.00-1.00-1.001.002.00-2.002.002.001.002.00----1.00----1.00-1.00--1.00-------1.001.00-1.001.001.00------1.00---1.00----------1.00-1.001.001.001.00-1.001.001.00----1.001.00-
...............................................................................................................................................................................................TTTCTACAGTCAGACGATA........................................1969.000.0021.0019.007.009.001.00-2.002.00------1.00-------------1.001.00-1.00-------------------1.00--------1.00--------------1.00--------------------------1.00----------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAATC........................................1940.000.0011.0022.00-2.001.00----2.00-------------1.00-------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGTTC........................................1930.000.0011.009.006.002.00-------1.00----------------------------------------------------------------------------------------------1.00------------------
......................................................................................................................................................................................TTTTGTTGGTTTCTAGGAC.................................................1925.000.00---4.00------------3.00-6.00-----------2.00---1.00--------2.00--1.002.00-1.00---------2.00-----------------------------------------1.00-----------------------
......................................................................................................................................................................................TTTTGTTGGTTTCTAGGA..................................................1823.000.002.00-1.003.00-14.00-----------------------------------1.00-----------------------------------------------------------------------------1.001.00----
...............................................................................................................................................................................................TTTCTACAGTCAGACGATT........................................1922.000.006.006.003.001.00---------------2.00-------1.00----1.00---1.00--------------------1.00-------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGCTC........................................1920.000.007.003.004.002.00-------------------1.00-----1.00--------1.001.00-------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGACC........................................1920.000.004.0013.002.001.00-------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTCTACAGTCAGACAATC........................................1819.000.001.00--2.001.00-1.00-2.00--1.001.00--1.001.001.00---3.00----------------------------1.00----------------------------1.00---------1.00----------------------------------1.00
...............................................................................................................................................................................................TTTCTACAGTCAGACGAAC........................................1918.000.003.0012.002.00---------------------------------------------1.00----------------------------------------------------------------------------
.................................................................................................................................................................................................TCTACAGTCAGACAATC........................................1718.000.00--------5.00--3.00-----2.00----------------2.00-----2.00-1.00-1.00---------------------------------------------------1.00--------1.00-------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGATG........................................1917.000.009.002.002.003.00---1.00---------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACTATC........................................1915.000.005.001.00-3.00---1.00-3.00-------------------1.00-----------------------------------1.00-----------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGGTC........................................1914.000.004.006.001.00---1.001.00-----------------------------------------------------------------------------------------------1.00---------------------
......................................................................................................................................................................................TTTTGTTGGTTTCTAGG...................................................1714.000.00--------------7.00----------------------------------------------1.001.00---1.00----1.00----1.00---------------------1.00-----1.00--------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGAGC........................................198.000.004.001.002.00---------------------------------------------------------1.00----------------------------------------------------------------
..............................................................................................................................................................................................GTTTCTACAGTCAGACGATC........................................208.000.00---3.00-----------4.00----------------------------------------------------------------------------1.00--------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAATA........................................196.000.002.003.00--------1.00------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACCATC........................................196.000.001.003.00--1.00-----1.00------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCTTTTGTTGGTTTTCGG....................................................195.000.00------------1.00-----------1.00-----------------------------------------------------1.00----------------------------1.00-1.00---------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGGTT........................................195.000.00-5.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAACC........................................194.000.001.002.00--1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGAT.........................................184.000.00----1.00--1.00-------1.00---------------------------------1.00---------------------------------------------------------------------------
................................................................................................................................................................................................TTCTACAGTCAGACATC.........................................174.000.00--------------------2.00---------------------------------------------------------------------1.00---------1.00------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACATTC........................................193.000.001.001.001.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAAAC........................................193.000.00-3.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TTTTGTTGGTTTCTAGGC..................................................183.000.00-----3.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACACTC........................................193.000.00-3.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTCTTTTGTTGGTTTTCG.....................................................183.000.00---------------------1.00--------------------------------------------------1.00-------1.00--------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGACT........................................193.000.001.001.00----1.00----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGA..........................................173.000.002.00-1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAATG........................................192.000.001.00--1.00-------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TTTTGTTGGTTTCTAGGAA.................................................192.000.00-----------------------------------------------------------------------------1.00-------------------------------------------1.00---
.................................................................................................................................................................................................TCTACAGTCAGACAAAC........................................172.000.00-----------1.00-----------------------------------------------------------------------1.00-----------------------------------------
.................................................................................................................................................................................................TCTACAGTCAGACAACC........................................172.000.00--1.00--------1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTCTACAGTCAGACATTC........................................182.000.00----1.00-----------------------1.00------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGTTT........................................192.000.001.00------------------1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACTATA........................................192.000.00---1.00-----1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGAAA........................................192.000.002.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGGCC........................................192.000.00-1.00---------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGGAC........................................192.000.00-1.00---------------------1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGCGC........................................192.000.00-1.00-----------1.00---------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGTTG........................................192.000.001.00-1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAATT........................................192.000.00--1.00-1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGCTA........................................192.000.00--2.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAAAA........................................192.000.00-2.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGGTG........................................191.000.00---1.00-------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGCCC........................................191.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGTGG........................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................ATTCTCCTCTTTTGTTGCGCC........................................................211.000.00---------------------------------------------------------------------------------------------------1.00-------------------------
.......................................................................................................................................................................AAAATAATTCTCCTCTTGATC..............................................................211.000.00--------------------------------------------------------------------------1.00--------------------------------------------------
.................................................................................................................................................................................................TCTACAGTCAGACAACG........................................171.000.00----------------------------------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGAAG........................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................AGATACGGAACTCCCTAAAGC.........211.000.00-----------------------------------------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGGCT........................................191.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTTTTGTTGGTTTCTAGCAC.................................................211.000.00---1.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................GTTTCTACAGTCAGACATA.........................................191.000.00---------------------------------------------------------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAGCTG.......................................201.000.001.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGCTT........................................191.000.00--------------------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CCCATTCAAGATACGGAACTC.................2111.001.00-----------------------------------------------------1.00-----------------------------------------------------------------------
....................................................................................................................................................................................TCTTTTGTTGGTTTCTAGGAC.................................................211.000.00-----1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGTTA........................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTCTACAGTCAGACAATA........................................181.000.00--------------------------------------------1.00--------------------------------------------------------------------------------
......................................................................................................................................................................................TTTTGTTGGTTTCTAGAG..................................................181.000.00-------------------------------------------------------------------------------------------1.00---------------------------------
.....................................................................................................................................................................................CTTTTGTTGGTTTCTAGGAC.................................................201.000.00-----1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................GTTTCTACAGTCAGACGAT.........................................191.000.00----------------------1.00------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................ACAAATATCCCATTCAAG............................1811.001.001.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGCTTTCTTTTCACTTGTTG..................................................................................................201.000.00-----------------------------------------------------------------------------------------------1.00-----------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAAGC........................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGCAC........................................191.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGTCA........................................191.000.00-------------------1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGAAT........................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GGTTTCTACAGTCAGACGATA........................................211.000.00---1.00-------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTTTTGTTGGTTTCTAGG...................................................181.000.00------------------------------------------------------------------------------------------------------------------1.00----------
...............................................................................................................................................................................................................................TACGGAACTCCCTAAAG..........1711.001.00-------------------------------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................TTCTACAGTCAGACAAAA........................................181.000.00---------------------------------------------------------------------------------------1.00-------------------------------------
..............................................................................................................................................................................................GTTTCTACAGTCAGACGA..........................................181.000.00--------------------1.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACCACC........................................191.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGAGG........................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCTTTTGTTGGTTTCTAGGA..................................................201.000.00----------------------------------------------------------------------------------------------------------------------1.00------
...............................................................................................................................................................................................TTTCTACAGTCAGACTTTG........................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTCTACAGTCAGACAGCTC.......................................191.000.00---------------1.00-------------------------------------------------------------------------------------------------------------
......................................................AATGGATAAGGCCAGAAG..................................................................................................................................................................................181.000.00----------------------------------------------------------------1.00------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACTA..........................................171.000.001.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGTGC........................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGC..........................................171.000.00---------------------------------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACATGC........................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACTTTC........................................191.000.00---1.00-------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAGTC........................................191.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTCTACAGTCAGACACTA........................................181.000.00----1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACAGTTT.......................................201.000.001.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTCTACAGTCAGACAGATC.......................................191.000.00---------------1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TTTTGTTGGTTTCTAGAAC.................................................191.000.00--------------------1.00--------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................AAAATAATTCTCCTCTTG.................................................................181.000.001.00----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................TCTACAGTCAGACAATG........................................171.000.001.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TTTCTACAGTCAGACGTGT........................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------

Antisense strand
TTAACCTCTTGTCAACCTTGATTTCATTCCTGTCGACTGAGAATAAACACAATCAATGGATAAGGCCAGTTGATAAGTTTGAGGTTAAACATTTTCAAGTTTTTAATTGAAGTCATAACTTTCCCAAGACAAAGCTTTCTTTTCACTTTGATCTTACATGGCATTTAAAAATAATTCTCCTCTTTTGTTGGTTTCTACAGTCAGACAAATATCCCATTCAAGATACGGAACTCCCTAAAGGTATGTACAG
...............................................................................................................................(((((((...........))))).)).................................................................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189787SRR189784SRR189785SRR037937(GSM510475)
293cand2. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189783SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR189786TAX577743(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577738(Rovira)
total RNA. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR191439(GSM715549)
176genomic small RNA (size selected RNA from . (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
TAX577745(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191441(GSM715551)
106genomic small RNA (size selected RNA from . (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR191542(GSM715652)
64genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR191484(GSM715594)
12genomic small RNA (size selected RNA from t. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191523(GSM715633)
107genomic small RNA (size selected RNA from . (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR191424(GSM715534)
138genomic small RNA (size selected RNA from . (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR191530(GSM715640)
132genomic small RNA (size selected RNA from . (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR191458(GSM715568)
28genomic small RNA (size selected RNA from t. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR343337SRR191446(GSM715556)
140genomic small RNA (size selected RNA from . (breast)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
........................................................................................................................................................................................................TCTTGAATGGGATATTTGTCTGA........................... 2311.001.00----------------------------------------------------------------------------------------------1.00------------------------------
.......................................................ATGGATAAGGCCAGTTCCCG............................................................................................................................................................................... 201.000.001.00----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................TGGTTTCTACAGTCAGGCA........................................... 191.000.00----------------------------------------------------------------------------------------1.00------------------------------------