ID: uc001hxt.2_intron_8_0_chr1_236399136_r
GENE: (7)
chr1:236399086-236399627-


(1)
AGO1.ip 		(3)
AGO2.ip 		(4)
B-CELL 		(3)
BRAIN 		(5)
BREAST 		(27)
CELL-LINE 		(4)
CERVIX 		(2)
HEART 		(2)
HELA 		(6)
LIVER 		(2)
OTHER 		(12)
SKIN 		(1)
TESTES

Sense strand
ACCTCTGCATGGAGAGTGTGGAACAGCATCTATGAAGAGAACTGTTTCAAGTAACTGGAGGGGGTGGGGGAAGAAGGAACGACTGATAGAGGGTCGGGAGAGGCCGGGTGCTGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCATCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTGTCAACTAAAAATACAAAAAAATTAGCCGGGCATGATGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTACAATGAGCAGAGATTGCGCCACTGTACTCCAGCCTGGGTGACTAAGTGAAACTCTGTCTCAAAAAAAAAAGAGGGTGGGGAGGGGAGTATTTGTTTCTATTGGAATAAAATTATACACTATAAAAGTTAAAACATTCTATGTTTGGGTATTATGCTTTCTTTTTCAGGCCTCGATCTGTTTATCGTCCTTTAAATCCTCTGGCGCCTAGCCGAGGTA
.........................................................................................................................................................................................................................................................................................................................................(((((.(((.((.......(((((((.((.(((....))).))....(((..((((..........)).))..)))...)))))))(((((((....)))))))........................)).))).))))).........................................................................
..................................................................................................................................................................................................................................................................................................................................323...................................................................................................................................................473...................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189785DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR343335SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040027(GSM532912)
G220T. (cervix)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040008(GSM532893)
G727N. (cervix)
.....................................................................................................................................................................................................................................................................................................GAGAATCACTTGAACCCGGGAGGCAATC.............................................................................................................................................................................................................................285.000.00-----5.00---------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ATTGCGCCACTGTACTCCAGCCGGGC...................................................................................................................................................................................264.000.003.001.00-------------------------------------------------------------------------
................................TGAAGAGAACTGTTTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.004.00------------------------1.00------------------1.00--1.00-------------1.00--------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAACATTCTATGTAG.........................................................................182.000.00----------------2.00----------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................ATCACTTGAACCCGGGAGGCAGAGGTCGTG.......................................................................................................................................................................................................................302.000.002.00--------------------------------------------------------------------------
..........GGAGAGTGTGGAACAGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00--------------------------------------------------------1.00-1.00----------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACATTCTATGTAG.........................................................................172.000.00----------------1.00-----------1.00----------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................ATGAGCAGAGATTGCGCCCCC..................................................................................................................................................................................................212.000.00-----------2.00---------------------------------------------------------------
.........TGGAGAGTGTGGAACAGCATCTATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002.00--2.00------------------------------------------------------------------------
......................................................................................................................................................AGGTGGGTGGATCATCTGAGGTCA................................................................................................................................................................................................................................................................................................................................................................................2402.002.00-------------1.00-------------------------------------------------1.00-----------
.........TGGAGAGTGTGGAACAGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00--1.00----------------------1.00-------------------------------------------------
.................................GAAGAGAACTGTTTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1721.501.50----------------------------------------------------------------------0.500.500.50--
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGTATTTGTTTCTATAGG..................................................................................................................181.000.001.00--------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................CTTGAACCCGGGAGGCAGAGGTGGC........................................................................................................................................................................................................................251.000.00-------------1.00-------------------------------------------------------------
................................................................................................................................................................................................................................................................................................GGCAGGAGAATCACTTGAACCCGGGAGGCAGGGTG...........................................................................................................................................................................................................................351.000.00---------------------------1.00-----------------------------------------------
..................................................................................................................................................................................................................................................................................................................ACCCGGGAGGCAGAGGTTAGGAG.....................................................................................................................................................................................................................231.000.00-1.00-------------------------------------------------------------------------
.........TGGAGAGTGTGGAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00--1.00------------------------------------------------------------------------
........................................................................................................................................................................................................................................AAAATTAGCCGGGCATGAGAC.................................................................................................................................................................................................................................................................................................211.000.00---1.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATGCTTTCTTTTCCT...................................................191.000.00-------------------1.00-------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCTCGATCTGTTTAGAA................................201.000.00--------1.00------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................ACTTGAACCCGGGAGGCAGATG............................................................................................................................................................................................................................221.000.00----------1.00----------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................GGAGAATCACTTGAACCCGGGAGGA.................................................................................................................................................................................................................................251.000.00----------1.00----------------------------------------------------------------
...............................................................................................................................................GAGGCCAAGGTGGGTGGATCTTAA.......................................................................................................................................................................................................................................................................................................................................................................................241.000.00-------------------------------------------------------1.00-------------------
..................................................................GGGGAAGAAGGAACGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------------------------------1.00-----------------------
..............................................................................................................................................................................................................................................AGCCGGGCATGATGGCAGCGCC..........................................................................................................................................................................................................................................................................................221.000.00-1.00-------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................CAGGAGAATCACTTGAACCCGGGAGGGGAC..............................................................................................................................................................................................................................301.000.00----1.00----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCGTCCTTTAAATCCTCTGGCGCCTAGC.......3111.001.00-------1.00-------------------------------------------------------------------
...................................................................................................................................................................ATCTGAGGTCAGGAGTTCAAGACCAGCCGTCC...........................................................................................................................................................................................................................................................................................................................................................321.000.00-1.00-------------------------------------------------------------------------
...............................................................................................................................................................................................................................................GCCGGGCATGATGGCAG..............................................................................................................................................................................................................................................................................................1701.001.00-------------------------------1.00-------------------------------------------
......................................................................................................GCCGGGTGCTGTGGCTCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00----1.00----------------------------------------------------------------------
......GCATGGAGAGTGTGGAACAGCATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-------1.00-------------------------------------------------------------------
...TCTGCATGGAGAGTGTGGAACAGCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................271.000.00---1.00-----------------------------------------------------------------------
............................................................................................................................................................................................................................................TTAGCCGGGCATGATGGCAAGA............................................................................................................................................................................................................................................................................................221.000.00-------------------------------------------------1.00-------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGTCCTTTAAATTTTT..................191.000.00--------------------------------------------1.00------------------------------
................................................................................................................................................................ATCATCTGAGGTCAGGAGGCCG........................................................................................................................................................................................................................................................................................................................................................................221.000.00-1.00-------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................AGAATCACTTGAACCCGGGAGGCACATG............................................................................................................................................................................................................................281.000.00----1.00----------------------------------------------------------------------
..........................................................................................................................................................................................................................................AATTAGCCGGGCATGATGTGGT..............................................................................................................................................................................................................................................................................................221.000.00-1.00-------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................GAACCCGGGAGGCAGAGGTAAA........................................................................................................................................................................................................................221.000.00------------------------------------------------------------------1.00--------
............AGAGTGTGGAACAGCATCTATGAAGAGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00-----------------------1.00---------------------------------------------------
.........TGGAGAGTGTGGAACAGCATCTATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00--1.00------------------------------------------------------------------------
......GCATGGAGAGTGTGGAACAGCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---1.00-----------------------------------------------------------------------
.................................................................................................................................................................TCATCTGAGGTCAGGAGTTCAAG......................................................................................................................................................................................................................................................................................................................................................................2301.001.00----------------------------------------------------------------1.00----------
.............................................................................................................................................................................................................................................................................................................CTTGAACCCGGGAGGCAGAGGTGCGG.......................................................................................................................................................................................................................261.000.001.00--------------------------------------------------------------------------
...............................ATGAAGAGAACTGTTTCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------1.00------
......................................................................................................................................................AGGTGGGTGGATCATCTGAGGTCAGGCTCG..........................................................................................................................................................................................................................................................................................................................................................................301.000.00-1.00-------------------------------------------------------------------------
................................................................TGGGGGAAGAAGGAACTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------------------------------------------------------------1.00-------------
............AGAGTGTGGAACAGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------1.00----------------------------------------------------
......GCATGGAGAGTGTGGAACAGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---1.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................CACTTGAACCCGGGAGGCAGAGGTCCC........................................................................................................................................................................................................................271.000.00-1.00-------------------------------------------------------------------------
...............................................................................................................TGTGGCTCACGCCTGTAATCCCAGCCGG...................................................................................................................................................................................................................................................................................................................................................................................................................281.000.001.00--------------------------------------------------------------------------
...........GAGAGTGTGGAACAGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--1.00------------------------------------------------------------------------
............................................................................................................................................................................................................................................TTAGCCGGGCATGATGGCAAA.............................................................................................................................................................................................................................................................................................211.000.00--1.00------------------------------------------------------------------------
.......CATGGAGAGTGTGGAACAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------1.00-------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................GAGAATCACTTGAACCCGGGAGGCAA...............................................................................................................................................................................................................................261.000.00---------------------------------------------1.00-----------------------------
..................................................................................................................................................................................................................................................................................................................................................TTGCGCCACTGTACTCCAGCCTGGGGGAT...............................................................................................................................................................................291.000.00----1.00----------------------------------------------------------------------
........................................................................................................................................................................................ACCAGCCTGGCCAACATGGTGAAACCCCGCGCC.....................................................................................................................................................................................................................................................................................................................................331.000.001.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................ACCCGGGAGGCAGAGGTTAAAAA.....................................................................................................................................................................................................................231.000.00--------------------------1.00------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................GATTGCGCCACTGTACTATA..........................................................................................................................................................................................201.000.00---------------------------------1.00-----------------------------------------
................................TGAAGAGAACTGTTTCAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00---------------------------------------------------------------------1.00-----
............................................................................................GTCGGGAGAGGCCGGGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------1.00------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAATTATACACTATT...............................................................................................181.000.00--------1.00------------------------------------------------------------------
......GCATGGAGAGTGTGGAACAGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-------1.00-------------------------------------------------------------------
..........................................................................AGGAACGACTGATAGAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------1.00-------------------------------------
........................................................................................................CGGGTGCTGTGGCTCACGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------1.00--------------------------------------------------------------
...........................ATCTATGAAGAGAACTGTTTCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------------------------------------------1.00--------------------
...................................................................................................................................................................................................................................................................................................AGGAGAATCACTTGAACCCGGGT....................................................................................................................................................................................................................................231.000.00---------1.00-----------------------------------------------------------------
...........GAGAGTGTGGAACAGCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--1.00------------------------------------------------------------------------
............................................................................................GTCGGGAGAGGCCGGGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00--------------------1.00------------------------------------------------------
.........TGGAGAGTGTGGAACAGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------1.00---------
.......................................................................................................................................................GGTGGGTGGATCATCTGA.....................................................................................................................................................................................................................................................................................................................................................................................1801.001.00-----------------------------------------1.00---------------------------------
......................................................................................................................................................AGGTGGGTGGATCATCTGAGGCAGG...............................................................................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................AACCCGGGAGGCAGAGGTTCG........................................................................................................................................................................................................................211.000.00-1.00-------------------------------------------------------------------------
...............................................................................................................................................................................................TGGCCAACATGGTGAAACCCCGAAG......................................................................................................................................................................................................................................................................................................................................251.000.00------------1.00--------------------------------------------------------------
.......................................AACTGTTTCAAGTAACTGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------------1.00----------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTATGTTTGGGTATTATGCTTTCTTTTT.....................................................3211.001.00-----------------------------------------------1.00---------------------------
.................................................................................................................................................................................................................................................................................................................................................ATTGCGCCACTGTACTCCAGCCGGC....................................................................................................................................................................................251.000.001.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTAAATCCTCTGGCGC............1911.001.00-----------------------------1.00---------------------------------------------
......................................................................................................................................................................................................................................................................GTAATCCCAGCTACTTGGCTCT..................................................................................................................................................................................................................................................................221.000.00--------------------------------------------------------------1.00------------
............................................................................................GTCGGGAGAGGCCGGCAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------1.00------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................AGCAGAGATTGCGCCGTCG.................................................................................................................................................................................................191.000.00----------------------------------1.00----------------------------------------
.......................................................................................................CCGGGTGCTGTGGCTCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------------1.00-----------------------------------
......................................................................................................................................................AGGTGGGTGGATCATCTGAGGTCAGGAGCC..........................................................................................................................................................................................................................................................................................................................................................................301.000.00-1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................ACTTGAACCCGGGAGGCAATTT............................................................................................................................................................................................................................221.000.00-------------------------------------------------------------------1.00-------
..................................................................................................................................................................................................................................................GGGCATGATGGCAGGTGCCTG.......................................................................................................................................................................................................................................................................................2101.001.00---------1.00-----------------------------------------------------------------
.....TGCATGGAGAGTGTGGAACAGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------------1.00--------------------------------------------------
...........GAGAGTGTGGAACAGCATCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--1.00------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAATTATACACTATA...............................................................................................1840.250.25--------0.25------------------------------------------------------------------
..................................AAGAGAACTGTTTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1690.220.22---------0.22-----------------------------------------------------------------
.......................................................................................AGAGGGTCGGGAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................1550.200.20-------------------------------------------------------------------------0.20-
.............................................................................................................................................................................................................................................................................................................................AGAGGTTACAATGAGCAG...............................................................................................................................................................................................................1860.170.17--------------------------------------------------------------------------0.17

Antisense strand
ACCTCTGCATGGAGAGTGTGGAACAGCATCTATGAAGAGAACTGTTTCAAGTAACTGGAGGGGGTGGGGGAAGAAGGAACGACTGATAGAGGGTCGGGAGAGGCCGGGTGCTGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCATCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTGTCAACTAAAAATACAAAAAAATTAGCCGGGCATGATGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTACAATGAGCAGAGATTGCGCCACTGTACTCCAGCCTGGGTGACTAAGTGAAACTCTGTCTCAAAAAAAAAAGAGGGTGGGGAGGGGAGTATTTGTTTCTATTGGAATAAAATTATACACTATAAAAGTTAAAACATTCTATGTTTGGGTATTATGCTTTCTTTTTCAGGCCTCGATCTGTTTATCGTCCTTTAAATCCTCTGGCGCCTAGCCGAGGTA
.........................................................................................................................................................................................................................................................................................................................................(((((.(((.((.......(((((((.((.(((....))).))....(((..((((..........)).))..)))...)))))))(((((((....)))))))........................)).))).))))).........................................................................
..................................................................................................................................................................................................................................................................................................................................323...................................................................................................................................................473...................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189785DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR343335SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040027(GSM532912)
G220T. (cervix)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR040008(GSM532893)
G727N. (cervix)
.........................................................................................................................................................................................CCAGCCTGGCCAACATGGTGAAACCCCGTGCC..................................................................................................................................................................................................................................................................................................................................... 324.000.00-4.00-------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGCCAGAGGATTTAAAGG.......... 2113.003.00---3.00-----------------------------------------------------------------------
.........................................................................................................................................................................................................................AACTAAAAATACAAAAAAATTCCTC............................................................................................................................................................................................................................................................................................................ 252.000.002.00--------------------------------------------------------------------------
.........................................................................................................................................................................................CCAGCCTGGCCAACATGGTGAAACCCCGTGCCC.................................................................................................................................................................................................................................................................................................................................... 332.000.001.001.00-------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................ATGGCAGGTGCCTGTAATCCCAGCTAAACG....................................................................................................................................................................................................................................................................... 301.000.00------1.00--------------------------------------------------------------------
............................................................................................................................................................................................................GAAACCCCGTGTCAACTAAATCCG.......................................................................................................................................................................................................................................................................................................................... 241.000.00-1.00-------------------------------------------------------------------------
..........................................................................................................GGTGCTGTGGCTCACGCCTGGCT............................................................................................................................................................................................................................................................................................................................................................................................................................. 231.000.00-1.00-------------------------------------------------------------------------
............................................................................................................................................TGGGAGGCCAAGGTGGGTGGCCTA.......................................................................................................................................................................................................................................................................................................................................................................................... 241.000.00---------------------------------------------------------1.00-----------------
..........................................................................................................................................................................................................................................................................................................TCACTTGAACCCGGGAGGCAGACC............................................................................................................................................................................................................................ 241.000.00-1.00-------------------------------------------------------------------------
......................................................................................................................................................................................AGACCAGCCTGGCCAACATGGTGAAACCCCAG........................................................................................................................................................................................................................................................................................................................................ 321.000.00------------------------------------1.00--------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAGAGGGTGGGAGG....................................................................................................................................... 221.000.00-----------------1.00---------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAGAGGGTGGCTTG....................................................................................................................................... 211.000.00------------------1.00--------------------------------------------------------
............................................................................................................................................................................................................................................TTAGCCGGGCATGATGGATC.............................................................................................................................................................................................................................................................................................. 201.000.00------------------1.00--------------------------------------------------------
.............................................................................................................................................................................................................................................................CAGGTGCCTGTAATCCCAGCA............................................................................................................................................................................................................................................................................ 211.000.00---------------1.00-----------------------------------------------------------
............................................................................................................................................TGGGAGGCCAAGGTGGGTGCTTA........................................................................................................................................................................................................................................................................................................................................................................................... 231.000.00--------------------------------1.00------------------------------------------
...........................................................................................................................................................GGTGGATCATCTGAGGTCAAAAG............................................................................................................................................................................................................................................................................................................................................................................ 231.000.00------------1.00--------------------------------------------------------------
........................................................................................................CGGGTGCTGTGGCTCACGCCTGTAATCCC......................................................................................................................................................................................................................................................................................................................................................................................................................... 291.000.001.00--------------------------------------------------------------------------
.............................................................................................................................................................TGGATCATCTGAGGTCAGGAGTTCATA...................................................................................................................................................................................................................................................................................................................................................................... 271.000.00-------------------------1.00-------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAGAGGGTGTAG......................................................................................................................................... 191.000.001.00--------------------------------------------------------------------------
........................................................................................................CGGGTGCTGTGGCTCACGCCTGTTCCC........................................................................................................................................................................................................................................................................................................................................................................................................................... 271.000.001.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................CCACTGTACTCCAGCCTGGGTAAAA.............................................................................................................................................................................. 251.000.00-----------------------------------1.00---------------------------------------
...............................................................................................................................................................................................................................................................................................................................................AGATTGCGCCACTGTACTCCAGCCTGGTGC................................................................................................................................................................................. 301.000.00----1.00----------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................GGAGAATCACTTGAACCCGGGAGGCAGTC............................................................................................................................................................................................................................. 291.000.00-1.00-------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................ACCCGGGAGGCAGAGGTTACAATGAGCACC.............................................................................................................................................................................................................. 301.000.001.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................AGGCAGGAGAATCACTTGAAAA......................................................................................................................................................................................................................................... 221.000.00-----------1.00---------------------------------------------------------------
.........................................................................................................................................................................................CCAGCCTGGCCAACATGGTGAAACCCCGTGGGC.................................................................................................................................................................................................................................................................................................................................... 331.000.001.00--------------------------------------------------------------------------
............................................................................................................................................................................CAGGAGTTCAAGACCAGCCTGGCCAACCAC.................................................................................................................................................................................................................................................................................................................................................... 301.000.00----------------------1.00----------------------------------------------------
.....................................................................................................................................................................................................................................AAAAAAATTAGCCGGGCCGT..................................................................................................................................................................................................................................................................................................... 201.000.00------1.00--------------------------------------------------------------------
........................................................................................................CGGGTGCTGTGGCTCACGCCTGTATCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................... 281.000.001.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................TTGCGCCACTGTACTAGG.......................................................................................................................................................................................... 181.000.00--------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAGAGGGTGAAG......................................................................................................................................... 201.000.00-----------------1.00---------------------------------------------------------
....................................................................................................................................................................................CAAGACCAGCCTGGCCAACACTT................................................................................................................................................................................................................................................................................................................................................... 231.000.00-1.00-------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCCTAGCCGAGGCCC 181.000.00-----------------------------------------------------------1.00---------------
........................................................................................................................................................................................................................................AAAATTAGCCGGGCATGACGG................................................................................................................................................................................................................................................................................................. 211.000.00-1.00-------------------------------------------------------------------------
.........................................................................................................................................................................................CCAGCCTGGCCAACATGGTGAAACCCCGTGGCC.................................................................................................................................................................................................................................................................................................................................... 331.000.00-1.00-------------------------------------------------------------------------
.................................................................................................................................................................AGGCTGGTCTTGAACTCCTGACCTCAGATGA.............................................................................................................................................................................................................................................................................................................................................................. 3101.001.00----------1.00----------------------------------------------------------------
................................................................................................................................................................................................................................AATACAAAAAAATTAGCAG........................................................................................................................................................................................................................................................................................................... 191.000.00-------------------1.00-------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................CAGGCTGGAGTACAGTGGCGCA..................................................................................................................................................................................... 2201.001.00---------------1.00-----------------------------------------------------------
.....................................................................................................................................................................................................................................AAAAAAATTAGCCGGGCATGATGTTCA.............................................................................................................................................................................................................................................................................................. 271.000.00------------------------------------------------1.00--------------------------
.................................................................................................................................................................TCATCTGAGGTCAGGAGTTCACATG.................................................................................................................................................................................................................................................................................................................................................................... 251.000.001.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAGAGGGTGGGAATG...................................................................................................................................... 221.000.00---------------------1.00-----------------------------------------------------
................................................................................................................................................................TGAACTCCTGACCTCAGATGAT........................................................................................................................................................................................................................................................................................................................................................................ 2201.001.00---------------1.00-----------------------------------------------------------
...............................................................................................................................................................................................................................................................GGTGCCTGTAATCCCAGCTACTTGCCG.................................................................................................................................................................................................................................................................... 271.000.001.00--------------------------------------------------------------------------
.........................................................................................................................................................................................CCAGCCTGGCCAACATGGTGAAACCCCGGTCC..................................................................................................................................................................................................................................................................................................................................... 321.000.001.00--------------------------------------------------------------------------
.................................................................................................................................................................TCATCTGAGGTCAGGAGTTCAACC..................................................................................................................................................................................................................................................................................................................................................................... 241.000.00---------1.00-----------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................AGGCAGGAGAATCACTTGAACAAAA...................................................................................................................................................................................................................................... 251.000.00-----------------------------------------------------1.00---------------------
...................................................................................................................................................................................................................................................................................................................................................AGGCTGGAGTACAGTGGCGCA...................................................................................................................................................................................... 2101.001.00-------------1.00-------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................ACTGTACTCCAGCCTGGGTGATGCT............................................................................................................................................................................ 251.000.001.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ATTGCGCCACTGTACTGG........................................................................................................................................................................................... 181.000.00--------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ATTGCGCCACTGTACGGA........................................................................................................................................................................................... 181.000.00------------------------------1.00--------------------------------------------
............................................................................................................................................................................................................................................................GCAGGTGCCTGTAATCCCAGAGAA.......................................................................................................................................................................................................................................................................... 241.000.00--------------------------------------1.00------------------------------------
................................................................................................................................................................................................................................................................................................GGCAGGAGAATCACTTGAACCCGGGAG................................................................................................................................................................................................................................... 271.000.00--------1.00------------------------------------------------------------------
.................................................................................................................................................................TCATCTGAGGTCAGGAGTTCAAA...................................................................................................................................................................................................................................................................................................................................................................... 231.000.00----------------------------------------1.00----------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................TCAAAAAAAAAAGAGGAAGG........................................................................................................................................... 201.000.00-----------------1.00---------------------------------------------------------
..........................................................................................................................................................................................................GTGAAACCCCGTGTCAACTAAAAATAAATG...................................................................................................................................................................................................................................................................................................................... 301.000.00------1.00--------------------------------------------------------------------
..............................................................................................................................................................GGATCATCTGAGGTCAGGATGCC......................................................................................................................................................................................................................................................................................................................................................................... 231.000.00-----------------------1.00---------------------------------------------------
.....................................................................................................................................................................................................................................AAAAAAATTAGCCGGGCATCATC.................................................................................................................................................................................................................................................................................................. 231.000.00-1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................................................TTAGCCGGGCATGATGGCACTTG........................................................................................................................................................................................................................................................................................... 231.000.00------1.00--------------------------------------------------------------------
............................................................................................................................................TGGGAGGCCAAGGTGGGTGGTCC........................................................................................................................................................................................................................................................................................................................................................................................... 231.000.00------------------------------------------1.00--------------------------------
.................................................................................................................................................................................................................................................................................................................................................ATTGCGCCACTGTACTGGA.......................................................................................................................................................................................... 191.000.00--------------1.00------------------------------------------------------------
.......................................................................................................CCGGGTGCTGTGGCTCACGCCTGTTCCC........................................................................................................................................................................................................................................................................................................................................................................................................................... 281.000.001.00--------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................GGCAGGAGAATCACTTGAACCCGGGGTTT................................................................................................................................................................................................................................. 291.000.00--------------------------------------------------1.00------------------------
................................................................................................................................................AGGCCAAGGTGGGTGGATCAGCGC...................................................................................................................................................................................................................................................................................................................................................................................... 241.000.001.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAGAGGGTGGTTG........................................................................................................................................ 211.000.00------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTTTTTTTTTGAGACAGAG............................................................................................................................................. 2511.001.001.00--------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................TTGAACCCGGGAGGCAGTTAT........................................................................................................................................................................................................................... 211.000.00----1.00----------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAGAGGGTCACA......................................................................................................................................... 201.000.00------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAGAGGGTAAAG......................................................................................................................................... 201.000.00---------------------1.00-----------------------------------------------------
...................................................................................................ACAGGCGTGAGCCACAGCACCCGGCCTC............................................................................................................................................................................................................................................................................................................................................................................................................................... 2880.380.380.38--------------------------------------------------------------------------
...................................................................................................GAGGCCGGGTGCTGTGGCTCACGCCTGTCTC............................................................................................................................................................................................................................................................................................................................................................................................................................ 310.250.000.25--------------------------------------------------------------------------