ID: uc001hwl.2_intron_0_0_chr1_235275424_r.5p
GENE: (4)
chr1:235276883-235277132-


(1)
B-CELL 		(4)
BREAST 		(15)
CELL-LINE 		(4)
HEART 		(3)
LIVER 		(1)
OTHER 		(24)
SKIN

Sense strand
CACCACCAGTGTTCCAGATGCTTCTGACTAAGCTCCCAACAATTAGTCAGGTAAGGAATTGGAATGTTATGACATAAAAGTGAGTGGGATTTAGAATCGAATGATTAGGGACATTTTAAAATGAGCCTAGTGAACATGATGAAATAAACTTATCTGTATAATGAAAACAATATGGGAGATATCAGCGCTTGACATTTTCCTCTCTGGTGGGAAACATCCAGATGACTGCCCAGATCTAGTGATTGTGCCC
...............................................................(((((....(((........)))........((((....))))...)))))........................................................................................................................................
...............................................................64.....................................................119.................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343336SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038857(GSM458540)
D20. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
.................................................................................................CGAATGATTAGGGACTCG.......................................................................................................................................18121.0018.00--1.004.001.00--2.002.00-2.00-1.00------1.00-2.00-1.00----1.00---------------1.001.00----1.00-----
.................................................................................................CGAATGATTAGGGAC..........................................................................................................................................15118.0018.0011.001.00------1.00-----------1.00---1.00----1.00----1.00--------------1.00------
.................................................................................................CGAATGATTAGGGACT.........................................................................................................................................16117.0018.00-5.00-2.003.004.00-------1.00---1.00----------------------------1.00---------
.................................................................................................CGAATGATTAGGGACTCGG......................................................................................................................................19115.0018.00-------2.001.00--2.001.001.00--1.001.002.00---1.00----1.00-----1.00--1.00-------------------
.................................................................................................CGAATGATTAGGGACTC........................................................................................................................................1717.0018.00----------1.001.001.00---1.00---1.00----------1.00----------------1.00-------
.................................................................................................CGAATGATTAGGGACTATC......................................................................................................................................1914.0018.00------4.00-------------------------------------------------
..............................................................................................AATCGAATGATTAGGGACATTTT.....................................................................................................................................2313.003.00--3.00-----------------------------------------------------
................................CTCCCAACAATTAGTCAG........................................................................................................................................................................................................1812.002.00-1.00----------------------------1.00-------------------------
...............AGATGCTTCTGACTAAGCT........................................................................................................................................................................................................................1912.002.00---------------2.00----------------------------------------
...CACCAGTGTTCCAGATGCTTCTGACAA............................................................................................................................................................................................................................272.000.00--2.00-----------------------------------------------------
.....................................................................................................................................................................................................................ACATCCAGATGACTGCCCAGATCC.............242.000.00---------2.00----------------------------------------------
...................................................................................................................................................................................................................AAACATCCAGATGACTGCCCAGATCTAGCG.........301.000.00--------------1.00-----------------------------------------
...............AGATGCTTCTGACTAAGCTCCCAACAATTAG............................................................................................................................................................................................................3111.001.00-1.00------------------------------------------------------
.............................................................................AAGTGAGTGGGATTTAGAATCGAATGAT.................................................................................................................................................2811.001.00-----------------------------------------1.00--------------
..............................AGCTCCCAACAATTAGTCAGAGA.....................................................................................................................................................................................................231.000.00--------------------------------1.00-----------------------
.......................CTGACTAAGCTCCCAACAATTAGTC..........................................................................................................................................................................................................2511.001.00-------------------------1.00------------------------------
.................................................................................................CGAATGATTAGGGACTCA.......................................................................................................................................1811.0018.00-------------------------------------------1.00------------
....ACCAGTGTTCCAGATGCTTCCCAG..............................................................................................................................................................................................................................241.000.00---------1.00----------------------------------------------
....................................................................................................................................................................................ATCAGCGCTTGACATTTTCCTCTCTGGTGG........................................3011.001.00-------------------------------------1.00------------------
..........................................................................................................................................................................................................................CAGATGACTGCCCAGATCTAGTG.........2311.001.00--------------------------------------1.00-----------------
....................................................................ATGACATAAAAGTGAGTGGGATTT..............................................................................................................................................................2411.001.00-----------------------------------1.00--------------------
..................TGCTTCTGACTAAGCTCCCAACAATTAGTCAGA.......................................................................................................................................................................................................331.000.00-------------------1.00------------------------------------
.............................................................................................................GACATTTTAAAATGAGCCTAGTGAACATGA...............................................................................................................3011.001.00------------------------------------------1.00-------------
.................................................................................................CGAATGATTAGGGACTCT.......................................................................................................................................1811.0018.00---------------------------------------1.00----------------
.......................................................................ACATAAAAGTGAGTGGGATTTAGAACCG.......................................................................................................................................................281.000.00--------------1.00-----------------------------------------
..................................................GTAAGGAATTGGAATGTTATGACATA..............................................................................................................................................................................2611.001.00-----------------------------------------------1.00--------
................................................................................................TCGAATGATTAGGGACTC........................................................................................................................................181.000.00----------------------------------------1.00---------------
....................................................................................................................................................................................................................AACATCCAGATGACTGCCC...................1911.001.00-------------1.00------------------------------------------
...............................................................................................ATCGAATGATTAGGGGAT.........................................................................................................................................181.000.00--1.00-----------------------------------------------------
....ACCAGTGTTCCAGATGCTTCTG................................................................................................................................................................................................................................2220.500.50----------------------0.50---------------------------------
.ACCACCAGTGTTCCAGATGCTTCT.................................................................................................................................................................................................................................2420.500.50--0.50-----------------------------------------------------
.......AGTGTTCCAGATGCTTCTGAC..............................................................................................................................................................................................................................2120.500.50-----------------------------------------------------0.50--
..............CAGATGCTTCTGACTAAG..........................................................................................................................................................................................................................1820.500.50--0.50-----------------------------------------------------
.................................TCCCAACAATTAGTCAG........................................................................................................................................................................................................1720.500.50----------------------------------------------------0.50---
................................................................................TGAGTGGGATTTAGAA..........................................................................................................................................................1660.330.33--------------0.33-----------------------------------------
.........TGTTCCAGATGCTTCTGA...............................................................................................................................................................................................................................1830.330.33-------------------------------------------------------0.33
..............................................................................................AATCGAATGATTAGG.............................................................................................................................................1530.330.33-----------------------0.33--------------------------------
..........GTTCCAGATGCTTCTGA...............................................................................................................................................................................................................................1730.330.33---------------------------------------------------0.33----
.ACCACCAGTGTTCCAGATG......................................................................................................................................................................................................................................1930.330.33------------------------------------------------------0.33-

Antisense strand
CACCACCAGTGTTCCAGATGCTTCTGACTAAGCTCCCAACAATTAGTCAGGTAAGGAATTGGAATGTTATGACATAAAAGTGAGTGGGATTTAGAATCGAATGATTAGGGACATTTTAAAATGAGCCTAGTGAACATGATGAAATAAACTTATCTGTATAATGAAAACAATATGGGAGATATCAGCGCTTGACATTTTCCTCTCTGGTGGGAAACATCCAGATGACTGCCCAGATCTAGTGATTGTGCCC
...............................................................(((((....(((........)))........((((....))))...)))))........................................................................................................................................
...............................................................64.....................................................119.................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343336SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038857(GSM458540)
D20. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR038853(GSM458536)
MELB. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................................................................TGTATAATGAAAACAATATTCA.......................................................................... 221.000.00--------------------------1.00-----------------------------
........................................................................................................................................................................................AGGAAAATGTCAAGCGC................................................. 1720.500.50---------------------------------------------------0.50----
...........................ATTGTTGGGAGCTTAG............................................................................................................................................................................................................... 1640.250.25---------0.25----------------------------------------------