ID: uc001hoi.2_intron_1_0_chr1_224378022_f.5p
GENE: (2)
chr1:224377972-224378221+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(5)
B-CELL 		(3)
BRAIN 		(6)
BREAST 		(25)
CELL-LINE 		(2)
CERVIX 		(5)
HEART 		(5)
HELA 		(1)
LIVER 		(1)
OTHER 		(23)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
ATAATGAACATCATGATTTCCCCAACATTCCTGGAAAAAGTCTTCCACTGGTAAGTAAAGGATTTGATACATATTCTAATTTTGTTTTTTCATTTGTTTGTTTTTTGAGACGGTGTCTCACTCAGTCGCCCAGGCTGGCGGGCAGTGGCACGATCTCGGCTCACTGTAACCTCCACCTCCCGGGTTCAAACGATTCTCATGCCTCAGTCTCCCAAGTAGTTGGGATTACAGGCGCATGCTACCACGCCCA
...................................................((((((((((((..(((..........)))..))))))).))))).........((((((...)))))).((((((.....))))))...((((((((.((....)))).))))))...................................................................................
..................................................51......................................................................................................................171.............................................................................
SizePerfect hitTotal NormPerfect NormGSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189786SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM532874(GSM532874)
G699T. (cervix)		SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
...................................................................................................................................................GCACGATCTCGGCTCACTGT...................................................................................20042.0042.0035.00------3.002.00---1.00---------------------1.00----------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGT...................................................................................1907.007.007.00--------------------------------------------------------------------------------
...................................................................................................................................................GCACGATCTCGGCTCACTGTAAAA...............................................................................2406.001.00-----6.00---------------------------------------------------------------------------
...........................................................................................................................................GGGCAGTGGCACGATCTCGGATAT.......................................................................................244.000.004.00--------------------------------------------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGTAAAA...............................................................................234.000.00---------3.00----------------------------------------------------------1.00------------
..................................................................ATACATATTCTAATTTTGTTTTTTCAT.............................................................................................................................................................2714.004.00----4.00----------------------------------------------------------------------------
...................................................................................................................................AGGCTGGCGGGCAGTGGCACG..................................................................................................2113.003.00-2.00------------------------------1.00------------------------------------------------
..................................................................................................................................................GGCACGATCTCGGCTCACTGT...................................................................................2103.003.003.00--------------------------------------------------------------------------------
...................................................................................................................................................GCACGATCTCGGCTCACTGTA..................................................................................2103.003.003.00--------------------------------------------------------------------------------
...........................................................................................................................................GGGCAGTGGCACGATCTCGGAGT........................................................................................233.000.003.00--------------------------------------------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGTG..................................................................................2003.007.003.00--------------------------------------------------------------------------------
...ATGAACATCATGATTTCCCCAA.................................................................................................................................................................................................................................2212.002.00-----------2.00---------------------------------------------------------------------
..................................................................ATACATATTCTAATTTTGTTTTTTCAC.............................................................................................................................................................272.000.00----2.00----------------------------------------------------------------------------
...................................AAAAGTCTTCCACTGGTGAGG..................................................................................................................................................................................................212.000.00---------------1.00-----------------------------1.00-----------------------------------
...........................................................................................................................................GGGCAGTGGCACGATCTCGGC..........................................................................................2102.002.001.00------1.00-------------------------------------------------------------------------
..................................................................................................................................................................ACTGTAACCTCCACCTCCCGGGTCCAG.............................................................272.000.00--2.00------------------------------------------------------------------------------
.....................................................................................................................................................ACGATCTCGGCTCACTGTAAC................................................................................2102.002.002.00--------------------------------------------------------------------------------
.................................................................................................................................................TGGCACGATCTCGGCTCACTGT...................................................................................2202.002.002.00--------------------------------------------------------------------------------
..................................................GTAAGTAAAGGATTTGATAA....................................................................................................................................................................................202.000.00----------------2.00----------------------------------------------------------------
...........................................................................................................................................GGGCAGTGGCACGATCTCGGAA.........................................................................................222.000.002.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TTGGGATTACAGGCGCATGCCAGC.......242.000.00-2.00-------------------------------------------------------------------------------
...........................................................................................................................................................TCGGCTCACTGTAACCTCCA...........................................................................2002.002.00------2.00--------------------------------------------------------------------------
......................CAACATTCCTGGAAAAAGTCT...............................................................................................................................................................................................................2112.002.00----------2.00----------------------------------------------------------------------
........CATCATGATTTCCCCAACATTCCTGGAAA.....................................................................................................................................................................................................................2912.002.00-------------2.00-------------------------------------------------------------------
............ATGATTTCCCCAACATTCCTG.........................................................................................................................................................................................................................2112.002.00---------------------1.00-------------1.00---------------------------------------------
....TGAACATCATGATTTCCCCAACATTCCTGGA.......................................................................................................................................................................................................................3112.002.00-----------------------1.00---------------------------------------------------1.00-----
.............................................................................................................................................GCAGTGGCACGATCTCGGCTAAA......................................................................................232.000.00----------------------------1.00----------------------------------------1.00-----------
...................................................................................................................................................GCACGATCTCGGCTCACTTCA..................................................................................212.000.002.00--------------------------------------------------------------------------------
..................................................................................................................................................................ACTGTAACCTCCACCTCCCGGGGTT...............................................................252.000.00-2.00-------------------------------------------------------------------------------
........................ACATTCCTGGAAAAAGTCTTCCACTGGTG.....................................................................................................................................................................................................291.000.00-----------------------------------------------------------------------1.00---------
...................................................................................................................................................GCACGATCTCGGCTCACTGTATAA...............................................................................2401.003.00-----------------------------------------------1.00---------------------------------
.........................................................AAGGATTTGATACATTCA...............................................................................................................................................................................181.000.00-------------------------------------------------------1.00-------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGTATTA...............................................................................231.000.00------------------1.00--------------------------------------------------------------
...........................................................................................................................................................TCGGCTCACTGTAACCTCCACCTCCCGGGTC................................................................311.000.00--1.00------------------------------------------------------------------------------
.........ATCATGATTTCCCCAACATTCCTGG........................................................................................................................................................................................................................2511.001.00-----------------------------------------1.00---------------------------------------
............................................................................................................................................................CGGCTCACTGTAACCTCCAAAA........................................................................221.000.00-------------------------------------------------------------------1.00-------------
.....................................................................................................TTTTTGAGACGGTGTCCCGC.................................................................................................................................201.000.00--1.00------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TTGGGATTACAGGCGACCC............191.000.00--1.00------------------------------------------------------------------------------
........................................................................................................................................................................................................................TAGTTGGGATTACAGGCGCACCA...........231.000.00--1.00------------------------------------------------------------------------------
.............................................................................................................................TCGCCCAGGCTGGCGCAG...........................................................................................................181.000.00-------------------------------------------1.00-------------------------------------
..................................................................................................................................................GGCACGATCTCGGCTAAAG.....................................................................................191.000.00---------------------1.00-----------------------------------------------------------
.....................................................................................................................................GCTGGCGGGCAGTGGTGG...................................................................................................181.000.00------------------------------------------------------1.00--------------------------
.....................................................................................................................................................................................................................AAGTAGTTGGGATTAC.....................1601.001.00--------1.00------------------------------------------------------------------------
.....................................................................................TTTTTCATTTGTTTGTTTTTTCACC............................................................................................................................................251.000.00--1.00------------------------------------------------------------------------------
....................................................................................................................................................................TGTAACCTCCACCTCCC.....................................................................1701.001.00--------1.00------------------------------------------------------------------------
.............................................................................................................................TCGCCCAGGCTGGCGGGCAGTGGTGCA..................................................................................................271.000.00-1.00-------------------------------------------------------------------------------
..................................................................................................................................CAGGCTGGCGGGCAGTGTTGC...................................................................................................211.000.00-------------------------------1.00-------------------------------------------------
...........CATGATTTCCCCAACATTCCTG.........................................................................................................................................................................................................................2211.001.00-------------------------------------------------1.00-------------------------------
.........ATCATGATTTCCCCAACATTCCT..........................................................................................................................................................................................................................2311.001.00---------------------------------------------------1.00-----------------------------
..........TCATGATTTCCCCAAC................................................................................................................................................................................................................................1611.001.00----------1.00----------------------------------------------------------------------
...........................................................................................................................................................TCGGCTCACTGTAACCTCCTCTG........................................................................231.000.00-----------------------------------------------------1.00---------------------------
..........................ATTCCTGGAAAAAGTCTTCCAC..........................................................................................................................................................................................................2211.001.00--------------------------1.00------------------------------------------------------
..............................................................................................................................................CAGTGGCACGATCTCGGCTCAAGT....................................................................................241.000.00--------------------------------------------------------1.00------------------------
...................................................................................................................................................................................................................................ACAGGCGCATGCTACCACGCCCACC251.000.00--1.00------------------------------------------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGTAACC...............................................................................2301.001.001.00--------------------------------------------------------------------------------
.............................................................................................................................................................................................ACGATTCTCATGCCTCAGCCCG.......................................221.000.00-1.00-------------------------------------------------------------------------------
.....................................................................................TTTTTCATTTGTTTGTTTTTGGTT.............................................................................................................................................241.000.00-1.00-------------------------------------------------------------------------------
..................................................................................................................................CAGGCTGGCGGGCAGTGGCACGATCTCG............................................................................................2811.001.00------------------------------------------------------------------1.00--------------
..................................................................................................................................CAGGCTGGCGGGCAGTGGG.....................................................................................................191.000.00----------------------------------------------------------------1.00----------------
..........................................................................................................................................................................................CAAACGATTCTCATGCCTCAGGTTT.......................................251.000.00----------------------------------------------1.00----------------------------------
...............................TGGAAAAAGTCTTCCACTGGTGA....................................................................................................................................................................................................231.000.00-------------------------------------------------------------1.00-------------------
..........TCATGATTTCCCCAACATTCCTGGAAAAAGT.................................................................................................................................................................................................................3111.001.00------------------------------------1.00--------------------------------------------
.............................................................................................................................TCGCCCAGGCTGGCGCAGG..........................................................................................................191.000.00----------------------1.00----------------------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGTATT................................................................................221.000.00-------------------------------------1.00-------------------------------------------
...................................................................................................GTTTTTTGAGACGGTGTCTCGCTG...............................................................................................................................241.000.00--1.00------------------------------------------------------------------------------
..............................................................................ATTTTGTTTTTTCATTTGTTC.......................................................................................................................................................211.000.00--1.00------------------------------------------------------------------------------
...................CCCCAACATTCCTGGAAA.....................................................................................................................................................................................................................1811.001.00-------------------1.00-------------------------------------------------------------
.................................................................................................................................CCAGGCTGGCGGGCAGTGGCACGATC...............................................................................................2611.001.00-------------------------1.00-------------------------------------------------------
...........CATGATTTCCCCAACATTCCTGGAAAAAG..................................................................................................................................................................................................................2911.001.00-----------1.00---------------------------------------------------------------------
.............................................................................................................................................GCAGTGGCACGATCTCGGCTATAA.....................................................................................241.000.00----------------------------------------------------1.00----------------------------
.............................................................................................................................................GCAGTGGCACGATCTCGGCTCAAAA....................................................................................251.000.00------------------1.00--------------------------------------------------------------
...ATGAACATCATGATTTCCCCAAC................................................................................................................................................................................................................................2311.001.00------------------------------------------------1.00--------------------------------
................................................................................................................................................................TCACTGTAACCTCCACCTCCCGCC..................................................................241.000.00-1.00-------------------------------------------------------------------------------
..............................................................................................................................................................GCTCACTGTAACCTCCACCTCCCGGCC.................................................................271.000.00--------------------------------------------------------------1.00------------------
........................................................................ATTCTAATTTTGTTTTTTCAT.............................................................................................................................................................2111.001.00-1.00-------------------------------------------------------------------------------
................................................................................................................................................................TCACTGTAACCTCCACCTCCCGGGCC................................................................261.000.00-1.00-------------------------------------------------------------------------------
...........................................................................................................................................................TCGGCTCACTGTAACCTCCACCTTC......................................................................251.000.00----------------------------------------------------------1.00----------------------
...................................................................................................................................AGGCTGGCGGGCAGTGGCGACC.................................................................................................221.000.00-1.00-------------------------------------------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGTAACTTTG............................................................................261.000.00------------------------------1.00--------------------------------------------------
..............................................................................................................................................CAGTGGCACGATCTCGGCTCAAGA....................................................................................241.000.001.00--------------------------------------------------------------------------------
.TAATGAACATCATGATTTCCCCAACA...............................................................................................................................................................................................................................2611.001.00-----------------1.00---------------------------------------------------------------
.........................................................................................TCATTTGTTTGTTTTTTATCC............................................................................................................................................211.000.00----1.00----------------------------------------------------------------------------
..............................................................................................................................................CAGTGGCACGATCTCGGCTGTA......................................................................................221.000.00------------------------1.00--------------------------------------------------------
..................................................................................................................................CAGGCTGGCGGGCAGTGAA.....................................................................................................191.000.00----------------------------------------------------------------------1.00----------
.................................................................................................................................CCAGGCTGGCGGGCAGTGGCGT...................................................................................................221.000.00--------------1.00------------------------------------------------------------------
.....................................................................................................TTTTTGAGACGGTGTCTCACTGGG.............................................................................................................................241.000.00-1.00-------------------------------------------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGTCAA................................................................................2201.007.00------------------------------------------------------------1.00--------------------
....................................................................................................................................................CACGATCTCGGCTCACTGTAAAAA..............................................................................241.000.00--------------------------------------1.00------------------------------------------
..................................................................ATACATATTCTAATTTTGTTTTT.................................................................................................................................................................2311.001.00----1.00----------------------------------------------------------------------------
..........................ATTCCTGGAAAAAGTCTTCC............................................................................................................................................................................................................2011.001.00----------------------------------------1.00----------------------------------------
.............................................................................................................................................GCAGTGGCACGATCTCGGCTCTAT.....................................................................................241.000.00---------------------------------------------------------------1.00-----------------
.....................................................................................TTTTTCATTTGTTTGTTTTTGTGT.............................................................................................................................................241.000.00-----------------------------------------------------------------1.00---------------
...................................................................................................................................................................................................................................ACAGGCGCATGCTACCACGCCTGGG251.000.00--1.00------------------------------------------------------------------------------
.................................................................................TTGTTTTTTCATTTGTTTGTTGG..................................................................................................................................................231.000.00-1.00-------------------------------------------------------------------------------
....TGAACATCATGATTTCCCCAACA...............................................................................................................................................................................................................................2311.001.00---------------1.00-----------------------------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGTAAAAT..............................................................................241.000.001.00--------------------------------------------------------------------------------
.................................................................................................................................CCAGGCTGGCGGGCAGGGGC.....................................................................................................201.000.00---------------------------------1.00-----------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTTCA..................................................................................201.000.00------------1.00--------------------------------------------------------------------
...................................................................................................................................AGGCTGGCGGGCAGTGGCGTG..................................................................................................211.000.00-1.00-------------------------------------------------------------------------------
...........CATGATTTCCCCAACATTCCTGGA.......................................................................................................................................................................................................................2411.001.00-------------------1.00-------------------------------------------------------------
...................................................................................................................................................GCACGATCTCGGCTCACTGTAA.................................................................................2201.001.001.00--------------------------------------------------------------------------------
..................................................................................................................................CAGGCTGGCGGGCAGTGGCA....................................................................................................2030.670.67-------0.33-0.33-----------------------------------------------------------------------
..............................................................................................TGTTTGTTTTTTGAGACGGTGTCTC...................................................................................................................................2520.500.50--0.50------------------------------------------------------------------------------
.......................................................................................TTTCATTTGTTTGTTTTTTGAGACG..........................................................................................................................................2530.330.33--0.33------------------------------------------------------------------------------
.............................................................................................................................TCGCCCAGGCTGGCGGGCAG.........................................................................................................2030.330.33-0.33-------------------------------------------------------------------------------
.............................................................................................................................TCGCCCAGGCTGGCGGGCAGCGG......................................................................................................2330.330.33--0.33------------------------------------------------------------------------------
..............................................................................ATTTTGTTTTTTCATTTGT.........................................................................................................................................................1930.330.33-0.33-------------------------------------------------------------------------------
............................................................................................................................GTCGCCCAGGCTGGCGGG............................................................................................................1830.330.33---0.33-----------------------------------------------------------------------------
..................................................................................................................................CAGGCTGGCGGGCAGTGGCGCAT.................................................................................................2370.290.14-----------------------0.14------------------------------------------------------0.14--
.............................................................................................................................TCGCCCAGGCTGGCGG.............................................................................................................1650.200.20----------------------0.20----------------------------------------------------------
..................................................................................................TGTTTTTTGAGACGGTGTCTCAC.................................................................................................................................2350.200.20--0.20------------------------------------------------------------------------------
..................................................................................................................................CAGGCTGGCGGGCAGTGGCGT...................................................................................................2170.140.14----------------------------------------------------------------------------0.14----
..................................................................................................................................CAGGCTGGCGGGCAGTGGC.....................................................................................................1970.140.14-----------------------------------------------------------------------------0.14---
..................................................................................................................................CAGGCTGGCGGGCAGTGGCGCTT.................................................................................................2370.140.14------------------------0.14--------------------------------------------------------

Antisense strand
ATAATGAACATCATGATTTCCCCAACATTCCTGGAAAAAGTCTTCCACTGGTAAGTAAAGGATTTGATACATATTCTAATTTTGTTTTTTCATTTGTTTGTTTTTTGAGACGGTGTCTCACTCAGTCGCCCAGGCTGGCGGGCAGTGGCACGATCTCGGCTCACTGTAACCTCCACCTCCCGGGTTCAAACGATTCTCATGCCTCAGTCTCCCAAGTAGTTGGGATTACAGGCGCATGCTACCACGCCCA
...................................................((((((((((((..(((..........)))..))))))).))))).........((((((...)))))).((((((.....))))))...((((((((.((....)))).))))))...................................................................................
..................................................51......................................................................................................................171.............................................................................
SizePerfect hitTotal NormPerfect NormGSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189786SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM532874(GSM532874)
G699T. (cervix)		SRR189782GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
................................................................................................................................................................................CTCCCGGGTTCAAACATAA....................................................... 1910.000.00---10.00-----------------------------------------------------------------------------
........................................................................................................................................................................ACCTCCACCTCCCGGAAG................................................................ 182.000.00-----------------1.00---------1.00-----------------------------------------------------
..............................................................................................................................................................................................................................GGATTACAGGCGCATGTCTG........ 202.000.00--------------------2.00------------------------------------------------------------
.................................................GGTAAGTAAAGGATTTTTT...................................................................................................................................................................................... 191.000.00----1.00----------------------------------------------------------------------------
............................................................................................................................................................................TTTGAACCCGGGAGGTGG............................................................ 1801.001.00------1.00--------------------------------------------------------------------------
........................................................................................................................................................................ACCTCCACCTCCCGGATAA............................................................... 191.000.00--------------------------------------------1.00------------------------------------
...............................................................................................................................................................CTCACTGTAACCTCCACCTCCCGGGTTAAG............................................................. 301.000.00-1.00-------------------------------------------------------------------------------
......................................................................................................................................................................................................ATGCCTCAGTCTCCCTCAC................................. 191.000.00-----------------------------1.00---------------------------------------------------
..................................................................................................................................................................................AGAATCGTTTGAACCCGGG..................................................... 1901.001.00---------------------------------------------------------1.00-----------------------
.....................................................................................................................................................................................GAGAATCGTTTGAACCC.................................................... 1701.001.00--------------1.00------------------------------------------------------------------
................................................................................................................................................................................................ATTCTCATGCCTCAGTCTCCCATGA................................. 251.000.00--------------------------------------------------------------------------1.00------
.............................................................................................................................................................................GTTTGAACCCGGGAGGTG........................................................... 1801.001.00------1.00--------------------------------------------------------------------------
........................................................................................................................................................................ACCTCCACCTCCCGGGTTCAAACGATTCCC.................................................... 301.000.00--1.00------------------------------------------------------------------------------
....................................................................................................................................................CACGATCTCGGCTCACTGA................................................................................... 191.000.00---------------------------------------1.00-----------------------------------------
..................................................................................................................................................................ACTGTAACCTCCACCTCCCGATTT................................................................ 241.000.00-----------------------------------------------------------1.00---------------------
....................................................................................................................................................CACGATCTCGGCTCACATAA.................................................................................. 201.000.00------------------------------------------------------------------------1.00--------
.................................................................................................................................................................................................TTCTCATGCCTCAGTCTCCCAACCG................................ 251.000.00--1.00------------------------------------------------------------------------------
............................................................................................................................................GGCAGTGGCACGATCTCGGCTCAAG..................................................................................... 251.000.00-------------------------------------------------------------------------1.00-------
.......................................................................................................................................................................AACCTCCACCTCCCGGGTC................................................................ 191.000.00------------------------------------------1.00--------------------------------------
...............................................................................................................................................................................TTTGAACCCGGGAGG............................................................ 1501.001.00------1.00--------------------------------------------------------------------------
.........ATCATGATTTCCCCAAAAGC............................................................................................................................................................................................................................. 201.000.00--------------------------------------------------1.00------------------------------
...................................................................................................................................................................................AGAATCGTTTGAACCCGG..................................................... 1801.001.00------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................................ACTACTTGGGAGACTGAGGCAT.............................. 2280.120.12--------------------------------------------------------------------------------0.12
......................................................................................................................................................................................GACTGAGGCATGAGAATCGTTTGAACC......................................... 2780.120.12-------------------------------------------------------------------------------0.12-