ID: uc001hmn.3_intron_16_0_chr1_220831177_f.5p
GENE: (17)
chr1:220831127-220831376+


(1)
CELL-LINE
(1)
HEART
(1)
HELA
(1)
OTHER
(2)
SKIN

Sense strand
TTGAGGGATCCAAGTGAAGGCGAAGCCAGTGGCAGAACCGACACCTCAAGGTGAGGAGCCACTATTAATACTTCGCTGCTAGGTCCCTGTGTATGAAAACGTACTTTTGAAATACTTACAGCACTTAATGATCATGAATAGATCTAATAACTAGATAGCATGCGTATTTTAGATTTTTATATTGGGGTGGGTTTTCATAATGTTACCTAGCATTCAAGTCAGTCAACTTTAAGTTTGTTTTCCAAACATG
..........................................................................((((.(((((......(((((....))))).........)))))))))................................................................................................................................
.............................................................62....................................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343334SRR343335SRR189785DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189782SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................AATACTTCGCTGCTACATG.....................................................................................................................................................................1925.000.0021.002.00-2.00-------
...................................................................ATACTTCGCTGCTAG........................................................................................................................................................................15112.0012.007.002.002.00--1.00-----
..................................................................AATACTTCGCTGCTACAT......................................................................................................................................................................188.000.004.002.002.00--------
..................................................................AATACTTCGCTGCTACA.......................................................................................................................................................................174.000.00-3.001.00--------
.............................................................................................................AAATACTTACAGCACAATG..........................................................................................................................192.000.002.00----------
..................................................................AATACTTCGCTGCTACATA.....................................................................................................................................................................191.000.00---1.00-------
.....................................................................ACTTCGCTGCTAGGTCCCTGTGCATG...........................................................................................................................................................261.000.00-------1.00---
..............................GGCAGAACCGACACC.............................................................................................................................................................................................................1530.330.33--------0.33--

Antisense strand
TTGAGGGATCCAAGTGAAGGCGAAGCCAGTGGCAGAACCGACACCTCAAGGTGAGGAGCCACTATTAATACTTCGCTGCTAGGTCCCTGTGTATGAAAACGTACTTTTGAAATACTTACAGCACTTAATGATCATGAATAGATCTAATAACTAGATAGCATGCGTATTTTAGATTTTTATATTGGGGTGGGTTTTCATAATGTTACCTAGCATTCAAGTCAGTCAACTTTAAGTTTGTTTTCCAAACATG
..........................................................................((((.(((((......(((((....))))).........)))))))))................................................................................................................................
.............................................................62....................................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343334SRR343335SRR189785DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189782SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................CTCACCTTGAGGTGTCGG................................................................................................................................................................................................... 1821.501.50----1.50------
......................................CGACACCTCAAGGTGAGCCG................................................................................................................................................................................................ 201.000.00------1.00----
.....................................................................................................................................................................................................................................TAAGTTTGTTTTCCAATTAT. 201.000.00-----1.00-----
.....................................ACCTTGAGGTGTCGG...................................................................................................................................................................................................... 1520.500.50----0.50------
...................................................................................................................................................TAACTAGATAGCATGCG...................................................................................... 170.200.00----------0.20
...................................................................................................................................................CATGCTATCTAGTTA........................................................................................ 1550.200.20---------0.20-