ID: uc001hma.2_intron_1_0_chr1_220233134_r.5p
GENE: (7)
chr1:220235899-220236148-


(2)
AGO2.ip 		(1)
AGO3.ip 		(1)
B-CELL 		(1)
BRAIN 		(15)
CELL-LINE 		(3)
HEART 		(2)
HELA 		(1)
KIDNEY 		(1)
OTHER 		(7)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
CTGCTATGAACCCCGATGCTGTGCTGCGAGTAGGAGGAGCAGGAAATAAGGTATGAAAAATGTCTGTCATCTGCTCTGAAGTGCAAGTGAATCATTGAAATACTCAACTTCTAAAAACATGAAATAAGAGTTTAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACC
.............................................................((((.......((...(((((...((((..((...))..))))..)))))......(((((......(((((..............(((((....)))))..))))).....)))))..)).....))))...........................................................
.............................................................62...............................................................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343334SRR343335SRR189782SRR189785GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR343336SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343337DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
.....................................................................................................................................................................ACTATAAATCATGCTGCTAAAG...............................................................2283.000.0028.0017.0014.0012.006.00--4.00-2.00------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTACAG...............................................................2248.000.0041.002.003.00-1.00----1.00------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCAAAG................................................................218.000.003.001.004.00-------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTACG................................................................218.000.008.00---------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTACAA..................................................................195.000.003.001.001.00-------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTAAAAT..............................................................235.000.003.00--1.001.00-----------------------------------
.......................................................................................................................................................................TATAAATCATGCTGCTAAAG...............................................................205.000.00-3.001.00------1.00------------------------------
........................................................................................................................................................................ATAAATCATGCTGCTAAAG...............................................................195.000.00-2.001.002.00------------------------------------
..........................................................................................................................................................................AAATCATGCTGCTATTACA.............................................................194.000.00-3.001.00-------------------------------------
..............GATGCTGTGCTGCGAA............................................................................................................................................................................................................................164.000.00------4.00---------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTAAAGA..............................................................234.000.00-3.001.00-------------------------------------
............................................................................................................................................................................ATCATGCTGCTATAAATTAG..........................................................203.000.003.00---------------------------------------
.................................................................................................................................................................................................................................CAATAGCAAAGACTTGGAACTCTG.2402.002.00--------2.00-------------------------------
...............................................................................................................................................................................................................................CACAATAGCAAAGACTTGGAACC....2302.002.00-----------------2.00----------------------
.............................................................................................................................................................CCCAAAGGACTATAAATCTCTG.......................................................................222.000.00------------------1.00-----------------1.00---
.................................................................................................................................................................................................................................CAATAGCAAAGACTTGGAAC.....2002.002.00-----2.00----------------------------------
...............................................................................................................................................................CAAAGGACTATAAATCTCTG.......................................................................202.000.00------------------1.00--------1.00------------
..................................................................TCATCTGCTCTGAAGTGCAAGCG.................................................................................................................................................................232.000.00---------------2.00------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTAAGAG..............................................................232.000.002.00---------------------------------------
...............................................................................................................................................................................................................................CACAATAGCAAAGACTTGGAACCACAA272.000.00----------------2.00-----------------------
.........................................................................................................................................................................................................................................AAGACTTGGAACCAACC1702.002.00----------2.00-----------------------------
........................................................................................................................................................................................................CGTATGTTTATTGTGGCACTCTG...........................232.000.00-------------2.00--------------------------
......................................................................................................................................................................CTATAAATCATGCTGCTACAG...............................................................211.000.001.00---------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTACTAA..............................................................231.000.001.00---------------------------------------
......................................................................................................................................................................CTATAAATCATGCTGCTAAAG...............................................................211.000.00-1.00--------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTACAGA..............................................................231.000.001.00---------------------------------------
......................................................................................................................................................................................................................................GCAAAGACTTGGAACC....1601.001.00--------------1.00-------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTCCA................................................................211.000.001.00---------------------------------------
.......................................................................................................................................................................TATAAATCATGCTGCTATTAC..............................................................211.000.00-1.00--------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTACAC...............................................................221.000.001.00---------------------------------------
..................................................................................................................................................................................CTGCTATAAAGACACATG......................................................1801.001.00------------------------------1.00---------
...............................................................................................................................................................................................................................CACAATAGCAAAGACTTGGAACTCTG.261.000.00--------1.00-------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTAATAG..............................................................231.000.001.00---------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTAGAAG..............................................................231.000.00-1.00--------------------------------------
.......................................................................................................................................................................TATAAATCATGCTGCTAAAAT..............................................................211.000.00----1.00-----------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTCAA................................................................211.000.001.00---------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTACAAG..............................................................231.000.00-1.00--------------------------------------
........................................................................................................................................................................ATAAATCATGCTGCTATTAC..............................................................201.000.001.00---------------------------------------
..........................CGAGTAGGAGGAGCAGG...............................................................................................................................................................................................................1711.001.00--------------------1.00-------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTGA.................................................................201.000.00---1.00------------------------------------
..............................................................................................................................................................................................................TTTATTGTGGCACTATTCA.........................1901.001.00-----1.00----------------------------------
........AACCCCGATGCTGTGCTGCGAGTAGGAGGAGCAGGA..............................................................................................................................................................................................................3611.001.00--------------------------1.00-------------
....................................................................................................................................................................................................................................TAGCAAAGACTTGGAACCAAA.211.000.00-----1.00----------------------------------
...............................................................................................................................................................................................................................CACAATAGCAAAGACTTGGA.......2001.001.00-----------1.00----------------------------
.............................................ATAAGGTATGAAAAAATT...........................................................................................................................................................................................181.000.00-------------------------------1.00--------
.....................................................................................................................................................................ACTATAAATCATGCTGCTACAAT..............................................................231.000.001.00---------------------------------------
.................................................................................................................................................................................................................................CAATAGCAAAGACTTGGAACCCTG.241.000.00---------------------1.00------------------
...........................................................................................................................................................TACCCAAAGGACTATAAATCTCTG.......................................................................241.000.00-------------------1.00--------------------
...........................................................................................................................................................TACCCAAAGGACTATAAATCAT.........................................................................2201.001.00-----1.00----------------------------------
....................GTGCTGCGAGTAGGAGGAG...................................................................................................................................................................................................................1911.001.00---------------------------------1.00------
.....................................................................................................................................................................ACTATAAATCATGCTGCCCTA................................................................211.000.00---1.00------------------------------------
..............................................................................................................................................................CCAAAGGACTATAAATCATGCTGC....................................................................2401.001.00-----1.00----------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTAAAT...............................................................221.000.00---1.00------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTACTA...............................................................221.000.001.00---------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTATAATC.............................................................241.000.001.00---------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCGAC.................................................................201.000.00---1.00------------------------------------
..............................................................................................................................................................................................................................TCACAATAGCAAAGACTTGGAACTCTG.271.000.00--------1.00-------------------------------
......................................................................................................................................................................CTATAAATCATGCTGCTACG................................................................201.000.001.00---------------------------------------
..........................................................................................................................................................................AAATCATGCTGCTATTAC..............................................................181.000.001.00---------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCTCA.................................................................201.000.00---1.00------------------------------------
.....................................................................................................................................................................ACTATAAATCATGCTGCAAAA................................................................211.000.001.00---------------------------------------
................................................................................................................................................................................................................................ACAATAGCAAAGACTTGGAACC....2201.001.00-----------------------------------1.00----
..................................................................................................................................................................AGGACTATAAATCATGCTGCTATAAAGACAC.........................................................3101.001.00----------1.00-----------------------------
...............................AGGAGGAGCAGGAAATAA.........................................................................................................................................................................................................1820.500.50---------------------------------------0.50

Antisense strand
CTGCTATGAACCCCGATGCTGTGCTGCGAGTAGGAGGAGCAGGAAATAAGGTATGAAAAATGTCTGTCATCTGCTCTGAAGTGCAAGTGAATCATTGAAATACTCAACTTCTAAAAACATGAAATAAGAGTTTAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACC
.............................................................((((.......((...(((((...((((..((...))..))))..)))))......(((((......(((((..............(((((....)))))..))))).....)))))..)).....))))...........................................................
.............................................................62...............................................................................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343334SRR343335SRR189782SRR189785GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR343336SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343337DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189786GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
..........................................................................................................................................................................................................................TTTGCTATTGTGAATAG............... 1702.002.00-----------2.00----------------------------
...........................................................................................................................................................................AATCATGCTGCTATAGTTA............................................................ 192.000.002.00---------------------------------------
...................................................................................................................................................TGGGTATATACCCAAAGGACTAAG............................................................................... 241.000.00----------------------1.00-----------------
..........................................................................................................................................................................................AAGACACATGCACACGTATGTTAGA....................................... 251.000.00-----------------------1.00----------------
............................................................................................................................................................................ATCATGCTGCTATAAAGAAAA......................................................... 211.000.00-------------------------------------1.00--
..................................................................................................................................................................................................................GCTATTGTGAATAGTGCCACAA.................. 2201.001.00------------1.00---------------------------
.................................................................................................................................................................................CGTGTGCATGTGTCTTTATAGCAGC................................................ 2501.001.00-----1.00----------------------------------
......................................................................................................................................................................................................CACGTATGTTTATTGCATA................................. 191.000.00----1.00-----------------------------------
..............GATGCTGTGCTGCGATTTG......................................................................................................................................................................................................................... 191.000.00---1.00------------------------------------
.........................................................................................................................................................................................................GTATGTTTATTGTGGTTTG.............................. 191.000.00-----------------------------1.00----------
................................................................................................................................................................................ATGTGTCTTTATAGCAGCA....................................................... 1901.001.00--------------------------------1.00-------
........................................................................................................................................................................TCTTTATAGCAGCATGATTTAT............................................................ 2201.001.00--------------1.00-------------------------
..............................................................................................................................................................................................CACATGCACACGTATGTTTACCCT.................................... 241.000.00----------------------------------1.00-----
..............................................................................................................................AGAGTTTAGCCATCCG............................................................................................................ 161.000.00-------------------------1.00--------------
..................................................................................................................................................................................TGTGCATGTGTCTTTATAGCAG.................................................. 2201.001.00------------1.00---------------------------
....................................................................................................................................TAGCCATCCCATTACTGTCA.................................................................................................. 201.000.00------------------------1.00---------------
................................................................................................................................................................................TGTGCATGTGTCTTTATAGCAGCA.................................................. 2401.001.00------------1.00---------------------------
........................................AGGAAATAAGGTATGAAG................................................................................................................................................................................................ 181.000.00--------------------------------------1.00-
.............................................................................................................................................................................TCTTTATAGCAGCATGA............................................................ 1701.001.00----------------------------1.00-----------