ID: uc001hma.2_intron_0_0_chr1_220232335_r.3p
GENE: (8)
chr1:220232285-220232534-


(1)
AGO2.ip
(5)
BREAST
(2)
CELL-LINE
(5)
HEART
(4)
LIVER
(1)
OTHER
(8)
SKIN

Sense strand
ATATCCTTTAGTTAGTTAAAATTGTTCTGTAGTCTTAAATTTCAAGTGAATTAAAACTTAACCTTTATGGACACTCATTATTTCATCCAGAATTTATTGGCTACTATTGGATAAGGAAGCAAAAGGCACTTAAAAATAACTAGAAAAACCACAATCCAATTAGCCACTAACTTGATTGATTGATTGATGTTTTTCTATAGGCAAGTTAACCGATATCCATGGGAATGTTCTTCAGTACCACAAGGATGTG
............................................................................................................................................(((((((((..((((.((((((..((......))..))))))))))..))))))))).....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR029127(GSM416756)
A549. (cell line)
SRR189783SRR343334SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................................................................................................................................ATTGATTGATGTTTTTCTATAG..................................................22131.0031.0023.00---2.00-1.001.00-----1.001.00---1.00--1.00-------
...................................................................................................................................................................................TTGATTGATGTTTTTCTATAGT.................................................22112.0011.0010.00---------1.00-----------1.00------
...................................................................................................................................................................................TTGATTGATGTTTTTCTATAG..................................................21111.0011.009.00-2.00--------------------------
................................................................................................................................................................................TGATTGATTGATGTTTTTCTA.....................................................21110.0010.00-10.00---------------------------
..................................................................................................................................................................................ATTGATTGATGTTTTTCTATA...................................................2116.006.004.00-------1.00--------------1.00-----
..................................................................................................................................................................................ATTGATTGATGTTTTCTAT.....................................................194.000.003.00-1.00--------------------------
..................................................................................................................................................................................ATTGATTGATGTTTTTCTAT....................................................2013.003.002.00-1.00--------------------------
....................................................................................................................................................................................................................ATATCCATGGGAATGTTCTCAG................222.000.00---2.00-------------------------
...................................................................................................................................................................................TTGATTGATGTTTTTCTATAGA.................................................2212.0011.002.00----------------------------
...........................................................................................................................................................................TTGATTGATTGATTGATGCT...........................................................201.000.00-----------------1.00-----------
............................................................................................................................................TAGAAAAACCACAATCCAATTAG.......................................................................................2311.001.001.00----------------------------
..............................................................................................................................................................................ATTGATTGATTGATGTTTGGG.......................................................211.000.00----------------1.00------------
...................................................................................................................................................................................TTGATTGATGTTTTTCTATAGG.................................................2211.001.001.00----------------------------
.........................................................................................................................................AACTAGAAAAACCACAATCCA............................................................................................2111.001.00-------------------1.00---------
..................................................................................................................................................................................ATTGATTGATGTTTTTCTA.....................................................1911.001.001.00----------------------------
........................................................................................................................................TAACTAGAAAAACCACAATCCAATT.........................................................................................2511.001.001.00----------------------------
.............................................................................................................................................AGAAAAACCACAATCCAATTAGC......................................................................................2311.001.00-----1.00-----------------------
..................................................................................................................................................................................ATTGATTGATGTTTTTCTATAGT.................................................2311.0031.001.00----------------------------
..................................................................................................................................................................................ATTGATTGATGTTTTTCTATAA..................................................2211.006.00-----------1.00-----------------
...................................................................................................................................AAAAATAACTAGAAAAACGCAG.................................................................................................221.000.00--------------------------1.00--
...............................................................................................................................................................................TTGATTGATTGATGTTTTTCTATAG..................................................2511.001.00--------------------1.00--------
...................................................................................................................................................................................TTGATTGATGTTTTTCTAGAG..................................................211.000.001.00----------------------------
..........................................................................................................................................ACTAGAAAAACCACAATCCAAT..........................................................................................2211.001.00---------1.00-------------------
..................................................................................................................................................................................ATTGATTGATGTTTTTCTAAAA..................................................2211.001.00------------------------1.00----
..................................................................................................................................................................................ATTGATTGATGTTTTTCTATAGA.................................................2311.0031.001.00----------------------------
.................................................................................................................................................................................GATTGATTGATGTTTTCTAT.....................................................201.000.001.00----------------------------
.........................................................................................................................................AACTAGAAAAACCACAATCCAATT.........................................................................................2411.001.001.00----------------------------
............................................................................................................................................................................TGATTGATTGATTGATGTTTAA........................................................221.000.00-------------------------1.00---
...........................................................................................................................................................................TTGATTGATTGATTGATGTTT..........................................................2150.200.20-----0.20-----------------------
.................................................................................................................................TTAAAAATAACTAGAAAAA......................................................................................................1950.200.20---------------------------0.20-
...................AATTGTTCTGTAGTC........................................................................................................................................................................................................................1580.120.12----------------------------0.12

Antisense strand
ATATCCTTTAGTTAGTTAAAATTGTTCTGTAGTCTTAAATTTCAAGTGAATTAAAACTTAACCTTTATGGACACTCATTATTTCATCCAGAATTTATTGGCTACTATTGGATAAGGAAGCAAAAGGCACTTAAAAATAACTAGAAAAACCACAATCCAATTAGCCACTAACTTGATTGATTGATTGATGTTTTTCTATAGGCAAGTTAACCGATATCCATGGGAATGTTCTTCAGTACCACAAGGATGTG
............................................................................................................................................(((((((((..((((.((((((..((......))..))))))))))..))))))))).....................................................
.......................................................................................................................................136.............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR029127(GSM416756)
A549. (cell line)
SRR189783SRR343334SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................................................................................................................TGTTCTTCAGTACCAGCTG...... 191.000.00---------------1.00-------------
........................................................................................................................................................................................................TATCGGTTAACTTGC................................... 1511.001.00------------1.00----------------